Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G38510

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006780: uroporphyrinogen III biosynthetic process0.00E+00
2GO:0090470: shoot organ boundary specification0.00E+00
3GO:0042821: pyridoxal biosynthetic process0.00E+00
4GO:0018023: peptidyl-lysine trimethylation0.00E+00
5GO:0090279: regulation of calcium ion import0.00E+00
6GO:0042820: vitamin B6 catabolic process0.00E+00
7GO:0071474: cellular hyperosmotic response0.00E+00
8GO:0002184: cytoplasmic translational termination0.00E+00
9GO:0015995: chlorophyll biosynthetic process3.76E-10
10GO:0006779: porphyrin-containing compound biosynthetic process6.75E-06
11GO:0006782: protoporphyrinogen IX biosynthetic process8.96E-06
12GO:0009658: chloroplast organization1.79E-05
13GO:1901259: chloroplast rRNA processing8.69E-05
14GO:0048564: photosystem I assembly1.48E-04
15GO:0032544: plastid translation1.85E-04
16GO:0043953: protein transport by the Tat complex1.86E-04
17GO:0009443: pyridoxal 5'-phosphate salvage1.86E-04
18GO:1902478: negative regulation of defense response to bacterium, incompatible interaction1.86E-04
19GO:0015671: oxygen transport1.86E-04
20GO:0065002: intracellular protein transmembrane transport1.86E-04
21GO:0034337: RNA folding1.86E-04
22GO:0048363: mucilage pectin metabolic process1.86E-04
23GO:0006783: heme biosynthetic process2.25E-04
24GO:0015979: photosynthesis3.24E-04
25GO:0006435: threonyl-tRNA aminoacylation4.19E-04
26GO:0018026: peptidyl-lysine monomethylation4.19E-04
27GO:0000256: allantoin catabolic process4.19E-04
28GO:0071668: plant-type cell wall assembly4.19E-04
29GO:0080183: response to photooxidative stress4.19E-04
30GO:0051262: protein tetramerization4.19E-04
31GO:0010275: NAD(P)H dehydrogenase complex assembly4.19E-04
32GO:0010207: photosystem II assembly5.38E-04
33GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition6.84E-04
34GO:0010136: ureide catabolic process6.84E-04
35GO:0034051: negative regulation of plant-type hypersensitive response6.84E-04
36GO:0005977: glycogen metabolic process6.84E-04
37GO:0006145: purine nucleobase catabolic process9.77E-04
38GO:0009052: pentose-phosphate shunt, non-oxidative branch9.77E-04
39GO:0033014: tetrapyrrole biosynthetic process9.77E-04
40GO:2001141: regulation of RNA biosynthetic process9.77E-04
41GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly9.77E-04
42GO:0010371: regulation of gibberellin biosynthetic process9.77E-04
43GO:0009152: purine ribonucleotide biosynthetic process9.77E-04
44GO:0046653: tetrahydrofolate metabolic process9.77E-04
45GO:0010021: amylopectin biosynthetic process1.29E-03
46GO:0000304: response to singlet oxygen1.65E-03
47GO:0045038: protein import into chloroplast thylakoid membrane1.65E-03
48GO:0019252: starch biosynthetic process1.65E-03
49GO:0010190: cytochrome b6f complex assembly2.03E-03
50GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.03E-03
51GO:0010027: thylakoid membrane organization2.54E-03
52GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.87E-03
53GO:0009817: defense response to fungus, incompatible interaction3.31E-03
54GO:0017004: cytochrome complex assembly3.80E-03
55GO:0071482: cellular response to light stimulus3.80E-03
56GO:0019432: triglyceride biosynthetic process4.30E-03
57GO:0048354: mucilage biosynthetic process involved in seed coat development4.82E-03
58GO:0031425: chloroplast RNA processing4.82E-03
59GO:0005982: starch metabolic process4.82E-03
60GO:0006631: fatty acid metabolic process4.97E-03
61GO:0009735: response to cytokinin5.20E-03
62GO:0042254: ribosome biogenesis5.51E-03
63GO:0009773: photosynthetic electron transport in photosystem I5.92E-03
64GO:0008285: negative regulation of cell proliferation5.92E-03
65GO:0009089: lysine biosynthetic process via diaminopimelate5.92E-03
66GO:0006352: DNA-templated transcription, initiation5.92E-03
67GO:0005983: starch catabolic process6.51E-03
68GO:0006094: gluconeogenesis7.11E-03
69GO:0009266: response to temperature stimulus7.73E-03
70GO:0006636: unsaturated fatty acid biosynthetic process9.03E-03
71GO:0019762: glucosinolate catabolic process9.03E-03
72GO:0006289: nucleotide-excision repair9.71E-03
73GO:0005975: carbohydrate metabolic process1.01E-02
74GO:0007017: microtubule-based process1.04E-02
75GO:0010073: meristem maintenance1.04E-02
76GO:0031408: oxylipin biosynthetic process1.11E-02
77GO:0016114: terpenoid biosynthetic process1.11E-02
78GO:0035428: hexose transmembrane transport1.19E-02
79GO:0016226: iron-sulfur cluster assembly1.19E-02
80GO:0019748: secondary metabolic process1.19E-02
81GO:0006412: translation1.26E-02
82GO:0009625: response to insect1.26E-02
83GO:0010227: floral organ abscission1.26E-02
84GO:0000271: polysaccharide biosynthetic process1.50E-02
85GO:0045489: pectin biosynthetic process1.58E-02
86GO:0046323: glucose import1.58E-02
87GO:0006633: fatty acid biosynthetic process1.63E-02
88GO:0009791: post-embryonic development1.75E-02
89GO:0000302: response to reactive oxygen species1.83E-02
90GO:0010228: vegetative to reproductive phase transition of meristem1.88E-02
91GO:1901657: glycosyl compound metabolic process2.01E-02
92GO:0009567: double fertilization forming a zygote and endosperm2.10E-02
93GO:0010286: heat acclimation2.19E-02
94GO:0018298: protein-chromophore linkage2.88E-02
95GO:0007568: aging3.19E-02
96GO:0055114: oxidation-reduction process3.25E-02
97GO:0006457: protein folding3.31E-02
98GO:0016051: carbohydrate biosynthetic process3.40E-02
99GO:0009853: photorespiration3.40E-02
100GO:0034599: cellular response to oxidative stress3.51E-02
101GO:0009640: photomorphogenesis4.08E-02
102GO:0042538: hyperosmotic salinity response4.79E-02
RankGO TermAdjusted P value
1GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
2GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity0.00E+00
3GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
4GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
5GO:0004567: beta-mannosidase activity0.00E+00
6GO:0080082: esculin beta-glucosidase activity0.00E+00
7GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity0.00E+00
8GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
9GO:0004852: uroporphyrinogen-III synthase activity0.00E+00
10GO:0047668: amygdalin beta-glucosidase activity0.00E+00
11GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
12GO:0005048: signal sequence binding0.00E+00
13GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
14GO:0070402: NADPH binding6.12E-06
15GO:0019843: rRNA binding3.17E-05
16GO:0003755: peptidyl-prolyl cis-trans isomerase activity8.96E-05
17GO:0004033: aldo-keto reductase (NADP) activity1.48E-04
18GO:0004325: ferrochelatase activity1.86E-04
19GO:0004853: uroporphyrinogen decarboxylase activity1.86E-04
20GO:0004856: xylulokinase activity1.86E-04
21GO:0005080: protein kinase C binding1.86E-04
22GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity1.86E-04
23GO:0016784: 3-mercaptopyruvate sulfurtransferase activity1.86E-04
24GO:0005344: oxygen transporter activity1.86E-04
25GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity1.86E-04
26GO:0005227: calcium activated cation channel activity1.86E-04
27GO:0080079: cellobiose glucosidase activity1.86E-04
28GO:0016776: phosphotransferase activity, phosphate group as acceptor1.86E-04
29GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity4.19E-04
30GO:0016630: protochlorophyllide reductase activity4.19E-04
31GO:0004829: threonine-tRNA ligase activity4.19E-04
32GO:0019156: isoamylase activity4.19E-04
33GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase4.19E-04
34GO:0042389: omega-3 fatty acid desaturase activity4.19E-04
35GO:0009977: proton motive force dependent protein transmembrane transporter activity4.19E-04
36GO:0033201: alpha-1,4-glucan synthase activity4.19E-04
37GO:0004373: glycogen (starch) synthase activity6.84E-04
38GO:0003913: DNA photolyase activity6.84E-04
39GO:0004751: ribose-5-phosphate isomerase activity6.84E-04
40GO:0016742: hydroxymethyl-, formyl- and related transferase activity6.84E-04
41GO:0008864: formyltetrahydrofolate deformylase activity6.84E-04
42GO:0005528: FK506 binding7.41E-04
43GO:0016851: magnesium chelatase activity9.77E-04
44GO:0004792: thiosulfate sulfurtransferase activity9.77E-04
45GO:0043023: ribosomal large subunit binding9.77E-04
46GO:0016987: sigma factor activity1.29E-03
47GO:0070628: proteasome binding1.29E-03
48GO:0009011: starch synthase activity1.29E-03
49GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.29E-03
50GO:0016279: protein-lysine N-methyltransferase activity1.29E-03
51GO:0001053: plastid sigma factor activity1.29E-03
52GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.29E-03
53GO:0016773: phosphotransferase activity, alcohol group as acceptor1.65E-03
54GO:0003959: NADPH dehydrogenase activity1.65E-03
55GO:0008374: O-acyltransferase activity1.65E-03
56GO:0004130: cytochrome-c peroxidase activity2.03E-03
57GO:0031593: polyubiquitin binding2.03E-03
58GO:0004556: alpha-amylase activity2.03E-03
59GO:0004332: fructose-bisphosphate aldolase activity2.03E-03
60GO:0005261: cation channel activity2.43E-03
61GO:0009881: photoreceptor activity2.87E-03
62GO:0008312: 7S RNA binding3.32E-03
63GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water3.80E-03
64GO:0008135: translation factor activity, RNA binding3.80E-03
65GO:0003746: translation elongation factor activity4.19E-03
66GO:0003735: structural constituent of ribosome5.13E-03
67GO:0016787: hydrolase activity5.92E-03
68GO:0031072: heat shock protein binding7.11E-03
69GO:0008266: poly(U) RNA binding7.73E-03
70GO:0016491: oxidoreductase activity7.88E-03
71GO:0051536: iron-sulfur cluster binding9.71E-03
72GO:0043130: ubiquitin binding9.71E-03
73GO:0003729: mRNA binding9.74E-03
74GO:0003924: GTPase activity1.16E-02
75GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.19E-02
76GO:0005525: GTP binding1.27E-02
77GO:0015144: carbohydrate transmembrane transporter activity1.55E-02
78GO:0008080: N-acetyltransferase activity1.58E-02
79GO:0005355: glucose transmembrane transporter activity1.66E-02
80GO:0005351: sugar:proton symporter activity1.75E-02
81GO:0048038: quinone binding1.83E-02
82GO:0003824: catalytic activity1.99E-02
83GO:0003684: damaged DNA binding2.10E-02
84GO:0008483: transaminase activity2.19E-02
85GO:0005200: structural constituent of cytoskeleton2.19E-02
86GO:0102483: scopolin beta-glucosidase activity2.67E-02
87GO:0004721: phosphoprotein phosphatase activity2.67E-02
88GO:0004601: peroxidase activity2.78E-02
89GO:0003723: RNA binding2.91E-02
90GO:0004222: metalloendopeptidase activity3.08E-02
91GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.19E-02
92GO:0008422: beta-glucosidase activity3.63E-02
93GO:0004185: serine-type carboxypeptidase activity4.08E-02
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Gene type



Gene DE type