GO Enrichment Analysis of Co-expressed Genes with
AT5G38510
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
2 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
3 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
4 | GO:0006399: tRNA metabolic process | 0.00E+00 |
5 | GO:0042593: glucose homeostasis | 0.00E+00 |
6 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
7 | GO:0006412: translation | 8.76E-14 |
8 | GO:0042254: ribosome biogenesis | 3.56E-09 |
9 | GO:0015979: photosynthesis | 2.51E-07 |
10 | GO:0032544: plastid translation | 1.00E-05 |
11 | GO:0010206: photosystem II repair | 1.39E-05 |
12 | GO:0010027: thylakoid membrane organization | 4.97E-05 |
13 | GO:0010207: photosystem II assembly | 5.88E-05 |
14 | GO:0009658: chloroplast organization | 8.74E-05 |
15 | GO:0042549: photosystem II stabilization | 1.23E-04 |
16 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.84E-04 |
17 | GO:0000481: maturation of 5S rRNA | 2.84E-04 |
18 | GO:1904964: positive regulation of phytol biosynthetic process | 2.84E-04 |
19 | GO:0042371: vitamin K biosynthetic process | 2.84E-04 |
20 | GO:0034337: RNA folding | 2.84E-04 |
21 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 2.84E-04 |
22 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 2.84E-04 |
23 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 6.25E-04 |
24 | GO:0034755: iron ion transmembrane transport | 6.25E-04 |
25 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 6.25E-04 |
26 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 6.25E-04 |
27 | GO:0009773: photosynthetic electron transport in photosystem I | 6.61E-04 |
28 | GO:0019684: photosynthesis, light reaction | 6.61E-04 |
29 | GO:0009750: response to fructose | 6.61E-04 |
30 | GO:0018298: protein-chromophore linkage | 7.94E-04 |
31 | GO:0009767: photosynthetic electron transport chain | 8.57E-04 |
32 | GO:0009735: response to cytokinin | 9.24E-04 |
33 | GO:0006000: fructose metabolic process | 1.01E-03 |
34 | GO:0006518: peptide metabolic process | 1.01E-03 |
35 | GO:0045493: xylan catabolic process | 1.01E-03 |
36 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.19E-03 |
37 | GO:0045490: pectin catabolic process | 1.29E-03 |
38 | GO:0080170: hydrogen peroxide transmembrane transport | 1.45E-03 |
39 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.45E-03 |
40 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.45E-03 |
41 | GO:2001141: regulation of RNA biosynthetic process | 1.45E-03 |
42 | GO:1902476: chloride transmembrane transport | 1.45E-03 |
43 | GO:0051513: regulation of monopolar cell growth | 1.45E-03 |
44 | GO:0015994: chlorophyll metabolic process | 1.94E-03 |
45 | GO:2000122: negative regulation of stomatal complex development | 1.94E-03 |
46 | GO:0030104: water homeostasis | 1.94E-03 |
47 | GO:0010037: response to carbon dioxide | 1.94E-03 |
48 | GO:0015976: carbon utilization | 1.94E-03 |
49 | GO:0009247: glycolipid biosynthetic process | 2.48E-03 |
50 | GO:0034052: positive regulation of plant-type hypersensitive response | 2.48E-03 |
51 | GO:0006564: L-serine biosynthetic process | 2.48E-03 |
52 | GO:0010236: plastoquinone biosynthetic process | 2.48E-03 |
53 | GO:0009107: lipoate biosynthetic process | 2.48E-03 |
54 | GO:0009409: response to cold | 2.61E-03 |
55 | GO:0009793: embryo development ending in seed dormancy | 2.96E-03 |
56 | GO:0016554: cytidine to uridine editing | 3.06E-03 |
57 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.06E-03 |
58 | GO:0032973: amino acid export | 3.06E-03 |
59 | GO:1902456: regulation of stomatal opening | 3.06E-03 |
60 | GO:0006810: transport | 3.12E-03 |
61 | GO:0042545: cell wall modification | 3.22E-03 |
62 | GO:0042372: phylloquinone biosynthetic process | 3.68E-03 |
63 | GO:1901259: chloroplast rRNA processing | 3.68E-03 |
64 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.68E-03 |
65 | GO:0009955: adaxial/abaxial pattern specification | 3.68E-03 |
66 | GO:0006821: chloride transport | 4.34E-03 |
67 | GO:0050829: defense response to Gram-negative bacterium | 4.34E-03 |
68 | GO:0009645: response to low light intensity stimulus | 4.34E-03 |
69 | GO:0009772: photosynthetic electron transport in photosystem II | 4.34E-03 |
70 | GO:0043090: amino acid import | 4.34E-03 |
71 | GO:0030497: fatty acid elongation | 4.34E-03 |
72 | GO:0042255: ribosome assembly | 5.03E-03 |
73 | GO:0043068: positive regulation of programmed cell death | 5.03E-03 |
74 | GO:0006605: protein targeting | 5.03E-03 |
75 | GO:0019375: galactolipid biosynthetic process | 5.03E-03 |
76 | GO:0032508: DNA duplex unwinding | 5.03E-03 |
77 | GO:0010492: maintenance of shoot apical meristem identity | 5.03E-03 |
78 | GO:0009231: riboflavin biosynthetic process | 5.03E-03 |
79 | GO:0042128: nitrate assimilation | 5.19E-03 |
80 | GO:0009790: embryo development | 5.42E-03 |
81 | GO:0015995: chlorophyll biosynthetic process | 5.47E-03 |
82 | GO:0010411: xyloglucan metabolic process | 5.47E-03 |
83 | GO:0017004: cytochrome complex assembly | 5.77E-03 |
84 | GO:0006002: fructose 6-phosphate metabolic process | 5.77E-03 |
85 | GO:0071482: cellular response to light stimulus | 5.77E-03 |
86 | GO:0009821: alkaloid biosynthetic process | 6.54E-03 |
87 | GO:0048507: meristem development | 6.54E-03 |
88 | GO:0080144: amino acid homeostasis | 6.54E-03 |
89 | GO:0006783: heme biosynthetic process | 6.54E-03 |
90 | GO:0009051: pentose-phosphate shunt, oxidative branch | 6.54E-03 |
91 | GO:1900865: chloroplast RNA modification | 7.35E-03 |
92 | GO:0010205: photoinhibition | 7.35E-03 |
93 | GO:0006779: porphyrin-containing compound biosynthetic process | 7.35E-03 |
94 | GO:0009637: response to blue light | 7.68E-03 |
95 | GO:0006782: protoporphyrinogen IX biosynthetic process | 8.19E-03 |
96 | GO:0009299: mRNA transcription | 8.19E-03 |
97 | GO:0006535: cysteine biosynthetic process from serine | 8.19E-03 |
98 | GO:0009698: phenylpropanoid metabolic process | 9.06E-03 |
99 | GO:0009089: lysine biosynthetic process via diaminopimelate | 9.06E-03 |
100 | GO:0009073: aromatic amino acid family biosynthetic process | 9.06E-03 |
101 | GO:0006879: cellular iron ion homeostasis | 9.06E-03 |
102 | GO:0006352: DNA-templated transcription, initiation | 9.06E-03 |
103 | GO:0000038: very long-chain fatty acid metabolic process | 9.06E-03 |
104 | GO:0010114: response to red light | 9.92E-03 |
105 | GO:0005983: starch catabolic process | 9.96E-03 |
106 | GO:0016024: CDP-diacylglycerol biosynthetic process | 9.96E-03 |
107 | GO:0015706: nitrate transport | 9.96E-03 |
108 | GO:0006006: glucose metabolic process | 1.09E-02 |
109 | GO:0009725: response to hormone | 1.09E-02 |
110 | GO:0006094: gluconeogenesis | 1.09E-02 |
111 | GO:0005986: sucrose biosynthetic process | 1.09E-02 |
112 | GO:0010143: cutin biosynthetic process | 1.19E-02 |
113 | GO:0010167: response to nitrate | 1.29E-02 |
114 | GO:0010030: positive regulation of seed germination | 1.29E-02 |
115 | GO:0010025: wax biosynthetic process | 1.39E-02 |
116 | GO:0000027: ribosomal large subunit assembly | 1.50E-02 |
117 | GO:0005992: trehalose biosynthetic process | 1.50E-02 |
118 | GO:0019344: cysteine biosynthetic process | 1.50E-02 |
119 | GO:0031408: oxylipin biosynthetic process | 1.72E-02 |
120 | GO:0048511: rhythmic process | 1.72E-02 |
121 | GO:0019915: lipid storage | 1.72E-02 |
122 | GO:0061077: chaperone-mediated protein folding | 1.72E-02 |
123 | GO:0009740: gibberellic acid mediated signaling pathway | 1.80E-02 |
124 | GO:0009814: defense response, incompatible interaction | 1.83E-02 |
125 | GO:0035428: hexose transmembrane transport | 1.83E-02 |
126 | GO:0006730: one-carbon metabolic process | 1.83E-02 |
127 | GO:0019748: secondary metabolic process | 1.83E-02 |
128 | GO:0006012: galactose metabolic process | 1.95E-02 |
129 | GO:0009306: protein secretion | 2.07E-02 |
130 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.19E-02 |
131 | GO:0042335: cuticle development | 2.31E-02 |
132 | GO:0034220: ion transmembrane transport | 2.31E-02 |
133 | GO:0000413: protein peptidyl-prolyl isomerization | 2.31E-02 |
134 | GO:0010087: phloem or xylem histogenesis | 2.31E-02 |
135 | GO:0046323: glucose import | 2.44E-02 |
136 | GO:0042752: regulation of circadian rhythm | 2.57E-02 |
137 | GO:0009749: response to glucose | 2.70E-02 |
138 | GO:0042744: hydrogen peroxide catabolic process | 2.73E-02 |
139 | GO:0002229: defense response to oomycetes | 2.83E-02 |
140 | GO:0000302: response to reactive oxygen species | 2.83E-02 |
141 | GO:0032502: developmental process | 2.97E-02 |
142 | GO:0006633: fatty acid biosynthetic process | 3.01E-02 |
143 | GO:0030163: protein catabolic process | 3.11E-02 |
144 | GO:0006464: cellular protein modification process | 3.25E-02 |
145 | GO:0009567: double fertilization forming a zygote and endosperm | 3.25E-02 |
146 | GO:0016311: dephosphorylation | 4.29E-02 |
147 | GO:0009407: toxin catabolic process | 4.76E-02 |
148 | GO:0010218: response to far red light | 4.76E-02 |
149 | GO:0010119: regulation of stomatal movement | 4.93E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
2 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
3 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
4 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
5 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
6 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
7 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
8 | GO:0019843: rRNA binding | 1.27E-23 |
9 | GO:0003735: structural constituent of ribosome | 2.74E-17 |
10 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.76E-08 |
11 | GO:0005528: FK506 binding | 6.51E-08 |
12 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 3.71E-06 |
13 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.69E-04 |
14 | GO:0004655: porphobilinogen synthase activity | 2.84E-04 |
15 | GO:0009671: nitrate:proton symporter activity | 2.84E-04 |
16 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.44E-04 |
17 | GO:0016168: chlorophyll binding | 6.09E-04 |
18 | GO:0008967: phosphoglycolate phosphatase activity | 6.25E-04 |
19 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 6.25E-04 |
20 | GO:0017118: lipoyltransferase activity | 6.25E-04 |
21 | GO:0047746: chlorophyllase activity | 6.25E-04 |
22 | GO:0042389: omega-3 fatty acid desaturase activity | 6.25E-04 |
23 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 6.25E-04 |
24 | GO:0043425: bHLH transcription factor binding | 6.25E-04 |
25 | GO:0004617: phosphoglycerate dehydrogenase activity | 6.25E-04 |
26 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 6.25E-04 |
27 | GO:0016415: octanoyltransferase activity | 6.25E-04 |
28 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 6.25E-04 |
29 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 6.25E-04 |
30 | GO:0050734: hydroxycinnamoyltransferase activity | 1.01E-03 |
31 | GO:0003935: GTP cyclohydrolase II activity | 1.01E-03 |
32 | GO:0031409: pigment binding | 1.19E-03 |
33 | GO:0035250: UDP-galactosyltransferase activity | 1.45E-03 |
34 | GO:0016851: magnesium chelatase activity | 1.45E-03 |
35 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.61E-03 |
36 | GO:0016987: sigma factor activity | 1.94E-03 |
37 | GO:0043495: protein anchor | 1.94E-03 |
38 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.94E-03 |
39 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 1.94E-03 |
40 | GO:0005253: anion channel activity | 1.94E-03 |
41 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 1.94E-03 |
42 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.94E-03 |
43 | GO:0004659: prenyltransferase activity | 1.94E-03 |
44 | GO:0001053: plastid sigma factor activity | 1.94E-03 |
45 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.94E-03 |
46 | GO:0045330: aspartyl esterase activity | 2.43E-03 |
47 | GO:0008374: O-acyltransferase activity | 2.48E-03 |
48 | GO:0009922: fatty acid elongase activity | 2.48E-03 |
49 | GO:0004130: cytochrome-c peroxidase activity | 3.06E-03 |
50 | GO:0005247: voltage-gated chloride channel activity | 3.06E-03 |
51 | GO:0030599: pectinesterase activity | 3.10E-03 |
52 | GO:0004124: cysteine synthase activity | 3.68E-03 |
53 | GO:0019899: enzyme binding | 4.34E-03 |
54 | GO:0004034: aldose 1-epimerase activity | 5.03E-03 |
55 | GO:0004033: aldo-keto reductase (NADP) activity | 5.03E-03 |
56 | GO:0008236: serine-type peptidase activity | 5.76E-03 |
57 | GO:0005381: iron ion transmembrane transporter activity | 7.35E-03 |
58 | GO:0016844: strictosidine synthase activity | 7.35E-03 |
59 | GO:0015112: nitrate transmembrane transporter activity | 7.35E-03 |
60 | GO:0004864: protein phosphatase inhibitor activity | 8.19E-03 |
61 | GO:0004805: trehalose-phosphatase activity | 8.19E-03 |
62 | GO:0008794: arsenate reductase (glutaredoxin) activity | 9.06E-03 |
63 | GO:0004185: serine-type carboxypeptidase activity | 9.92E-03 |
64 | GO:0004089: carbonate dehydratase activity | 1.09E-02 |
65 | GO:0031072: heat shock protein binding | 1.09E-02 |
66 | GO:0008266: poly(U) RNA binding | 1.19E-02 |
67 | GO:0008146: sulfotransferase activity | 1.29E-02 |
68 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.39E-02 |
69 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.39E-02 |
70 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.39E-02 |
71 | GO:0004707: MAP kinase activity | 1.72E-02 |
72 | GO:0030570: pectate lyase activity | 1.95E-02 |
73 | GO:0022891: substrate-specific transmembrane transporter activity | 1.95E-02 |
74 | GO:0016746: transferase activity, transferring acyl groups | 1.97E-02 |
75 | GO:0003756: protein disulfide isomerase activity | 2.07E-02 |
76 | GO:0003727: single-stranded RNA binding | 2.07E-02 |
77 | GO:0010181: FMN binding | 2.57E-02 |
78 | GO:0005355: glucose transmembrane transporter activity | 2.57E-02 |
79 | GO:0016853: isomerase activity | 2.57E-02 |
80 | GO:0004252: serine-type endopeptidase activity | 2.66E-02 |
81 | GO:0004872: receptor activity | 2.70E-02 |
82 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.83E-02 |
83 | GO:0046910: pectinesterase inhibitor activity | 3.08E-02 |
84 | GO:0016597: amino acid binding | 3.54E-02 |
85 | GO:0015250: water channel activity | 3.68E-02 |
86 | GO:0005509: calcium ion binding | 3.79E-02 |
87 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 4.13E-02 |
88 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 4.29E-02 |
89 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.45E-02 |
90 | GO:0015238: drug transmembrane transporter activity | 4.60E-02 |
91 | GO:0003723: RNA binding | 4.70E-02 |
92 | GO:0004222: metalloendopeptidase activity | 4.76E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009575: chromoplast stroma | 0.00E+00 |
2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
3 | GO:0044391: ribosomal subunit | 0.00E+00 |
4 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
5 | GO:0009507: chloroplast | 2.13E-54 |
6 | GO:0009941: chloroplast envelope | 2.75E-28 |
7 | GO:0009570: chloroplast stroma | 4.52E-28 |
8 | GO:0009535: chloroplast thylakoid membrane | 6.66E-25 |
9 | GO:0009543: chloroplast thylakoid lumen | 1.47E-18 |
10 | GO:0009534: chloroplast thylakoid | 8.07E-18 |
11 | GO:0005840: ribosome | 2.35E-14 |
12 | GO:0009579: thylakoid | 9.98E-12 |
13 | GO:0031977: thylakoid lumen | 7.46E-10 |
14 | GO:0030095: chloroplast photosystem II | 1.56E-06 |
15 | GO:0009654: photosystem II oxygen evolving complex | 4.20E-06 |
16 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.39E-05 |
17 | GO:0019898: extrinsic component of membrane | 2.07E-05 |
18 | GO:0000312: plastid small ribosomal subunit | 5.88E-05 |
19 | GO:0016020: membrane | 1.56E-04 |
20 | GO:0009782: photosystem I antenna complex | 2.84E-04 |
21 | GO:0043674: columella | 2.84E-04 |
22 | GO:0009547: plastid ribosome | 2.84E-04 |
23 | GO:0009523: photosystem II | 3.21E-04 |
24 | GO:0009706: chloroplast inner membrane | 5.66E-04 |
25 | GO:0042170: plastid membrane | 6.25E-04 |
26 | GO:0000311: plastid large ribosomal subunit | 7.56E-04 |
27 | GO:0010007: magnesium chelatase complex | 1.01E-03 |
28 | GO:0009509: chromoplast | 1.01E-03 |
29 | GO:0030076: light-harvesting complex | 1.07E-03 |
30 | GO:0042646: plastid nucleoid | 1.45E-03 |
31 | GO:0015935: small ribosomal subunit | 1.60E-03 |
32 | GO:0034707: chloride channel complex | 3.06E-03 |
33 | GO:0031969: chloroplast membrane | 3.49E-03 |
34 | GO:0016363: nuclear matrix | 3.68E-03 |
35 | GO:0022626: cytosolic ribosome | 3.84E-03 |
36 | GO:0009295: nucleoid | 4.14E-03 |
37 | GO:0042807: central vacuole | 4.34E-03 |
38 | GO:0009533: chloroplast stromal thylakoid | 4.34E-03 |
39 | GO:0005763: mitochondrial small ribosomal subunit | 6.54E-03 |
40 | GO:0009705: plant-type vacuole membrane | 6.71E-03 |
41 | GO:0015934: large ribosomal subunit | 7.01E-03 |
42 | GO:0022627: cytosolic small ribosomal subunit | 9.59E-03 |
43 | GO:0032040: small-subunit processome | 9.96E-03 |
44 | GO:0005618: cell wall | 1.05E-02 |
45 | GO:0042651: thylakoid membrane | 1.60E-02 |
46 | GO:0022625: cytosolic large ribosomal subunit | 1.64E-02 |
47 | GO:0009536: plastid | 2.01E-02 |
48 | GO:0009505: plant-type cell wall | 2.08E-02 |
49 | GO:0010287: plastoglobule | 2.27E-02 |
50 | GO:0009522: photosystem I | 2.57E-02 |
51 | GO:0016592: mediator complex | 2.97E-02 |
52 | GO:0071944: cell periphery | 3.11E-02 |