GO Enrichment Analysis of Co-expressed Genes with
AT5G38510
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 2 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 3 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 4 | GO:0015979: photosynthesis | 1.57E-11 |
| 5 | GO:0006109: regulation of carbohydrate metabolic process | 9.64E-06 |
| 6 | GO:0048564: photosystem I assembly | 6.06E-05 |
| 7 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.04E-04 |
| 8 | GO:0000481: maturation of 5S rRNA | 1.04E-04 |
| 9 | GO:1904964: positive regulation of phytol biosynthetic process | 1.04E-04 |
| 10 | GO:0043686: co-translational protein modification | 1.04E-04 |
| 11 | GO:0043007: maintenance of rDNA | 1.04E-04 |
| 12 | GO:0034337: RNA folding | 1.04E-04 |
| 13 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.04E-04 |
| 14 | GO:0000476: maturation of 4.5S rRNA | 1.04E-04 |
| 15 | GO:0000967: rRNA 5'-end processing | 1.04E-04 |
| 16 | GO:0043085: positive regulation of catalytic activity | 1.61E-04 |
| 17 | GO:0018026: peptidyl-lysine monomethylation | 2.44E-04 |
| 18 | GO:0034470: ncRNA processing | 2.44E-04 |
| 19 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.44E-04 |
| 20 | GO:0006741: NADP biosynthetic process | 2.44E-04 |
| 21 | GO:0006954: inflammatory response | 4.05E-04 |
| 22 | GO:0071492: cellular response to UV-A | 4.05E-04 |
| 23 | GO:0005977: glycogen metabolic process | 4.05E-04 |
| 24 | GO:0019674: NAD metabolic process | 4.05E-04 |
| 25 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 5.82E-04 |
| 26 | GO:0019363: pyridine nucleotide biosynthetic process | 5.82E-04 |
| 27 | GO:0006020: inositol metabolic process | 5.82E-04 |
| 28 | GO:0010239: chloroplast mRNA processing | 5.82E-04 |
| 29 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 5.82E-04 |
| 30 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 5.82E-04 |
| 31 | GO:0006662: glycerol ether metabolic process | 6.70E-04 |
| 32 | GO:0006021: inositol biosynthetic process | 7.73E-04 |
| 33 | GO:0010021: amylopectin biosynthetic process | 7.73E-04 |
| 34 | GO:0071486: cellular response to high light intensity | 7.73E-04 |
| 35 | GO:0009765: photosynthesis, light harvesting | 7.73E-04 |
| 36 | GO:0015994: chlorophyll metabolic process | 7.73E-04 |
| 37 | GO:0022622: root system development | 7.73E-04 |
| 38 | GO:0031365: N-terminal protein amino acid modification | 9.77E-04 |
| 39 | GO:0010027: thylakoid membrane organization | 1.16E-03 |
| 40 | GO:0010190: cytochrome b6f complex assembly | 1.19E-03 |
| 41 | GO:0042549: photosystem II stabilization | 1.19E-03 |
| 42 | GO:0046855: inositol phosphate dephosphorylation | 1.19E-03 |
| 43 | GO:0042793: transcription from plastid promoter | 1.19E-03 |
| 44 | GO:0015995: chlorophyll biosynthetic process | 1.36E-03 |
| 45 | GO:0010189: vitamin E biosynthetic process | 1.43E-03 |
| 46 | GO:0016311: dephosphorylation | 1.43E-03 |
| 47 | GO:1901259: chloroplast rRNA processing | 1.43E-03 |
| 48 | GO:0018298: protein-chromophore linkage | 1.51E-03 |
| 49 | GO:0032880: regulation of protein localization | 1.67E-03 |
| 50 | GO:0006605: protein targeting | 1.93E-03 |
| 51 | GO:0032508: DNA duplex unwinding | 1.93E-03 |
| 52 | GO:0000105: histidine biosynthetic process | 1.93E-03 |
| 53 | GO:0016559: peroxisome fission | 1.93E-03 |
| 54 | GO:0009642: response to light intensity | 1.93E-03 |
| 55 | GO:0034599: cellular response to oxidative stress | 1.98E-03 |
| 56 | GO:0009657: plastid organization | 2.21E-03 |
| 57 | GO:0045454: cell redox homeostasis | 3.20E-03 |
| 58 | GO:0009773: photosynthetic electron transport in photosystem I | 3.42E-03 |
| 59 | GO:0006415: translational termination | 3.42E-03 |
| 60 | GO:0019684: photosynthesis, light reaction | 3.42E-03 |
| 61 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.42E-03 |
| 62 | GO:0006790: sulfur compound metabolic process | 3.75E-03 |
| 63 | GO:0043086: negative regulation of catalytic activity | 3.86E-03 |
| 64 | GO:2000012: regulation of auxin polar transport | 4.09E-03 |
| 65 | GO:0010020: chloroplast fission | 4.44E-03 |
| 66 | GO:0019853: L-ascorbic acid biosynthetic process | 4.80E-03 |
| 67 | GO:0010030: positive regulation of seed germination | 4.80E-03 |
| 68 | GO:0046854: phosphatidylinositol phosphorylation | 4.80E-03 |
| 69 | GO:0000162: tryptophan biosynthetic process | 5.18E-03 |
| 70 | GO:0005992: trehalose biosynthetic process | 5.56E-03 |
| 71 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.95E-03 |
| 72 | GO:0016575: histone deacetylation | 5.95E-03 |
| 73 | GO:0048511: rhythmic process | 6.35E-03 |
| 74 | GO:0061077: chaperone-mediated protein folding | 6.35E-03 |
| 75 | GO:0006012: galactose metabolic process | 7.18E-03 |
| 76 | GO:0009306: protein secretion | 7.61E-03 |
| 77 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 8.05E-03 |
| 78 | GO:0008284: positive regulation of cell proliferation | 8.05E-03 |
| 79 | GO:0042631: cellular response to water deprivation | 8.49E-03 |
| 80 | GO:0048868: pollen tube development | 8.95E-03 |
| 81 | GO:0009958: positive gravitropism | 8.95E-03 |
| 82 | GO:0042752: regulation of circadian rhythm | 9.42E-03 |
| 83 | GO:0005975: carbohydrate metabolic process | 9.59E-03 |
| 84 | GO:0019252: starch biosynthetic process | 9.90E-03 |
| 85 | GO:0008654: phospholipid biosynthetic process | 9.90E-03 |
| 86 | GO:0002229: defense response to oomycetes | 1.04E-02 |
| 87 | GO:1901657: glycosyl compound metabolic process | 1.14E-02 |
| 88 | GO:0009658: chloroplast organization | 1.24E-02 |
| 89 | GO:0009817: defense response to fungus, incompatible interaction | 1.62E-02 |
| 90 | GO:0010218: response to far red light | 1.74E-02 |
| 91 | GO:0048527: lateral root development | 1.80E-02 |
| 92 | GO:0009637: response to blue light | 1.92E-02 |
| 93 | GO:0010114: response to red light | 2.30E-02 |
| 94 | GO:0051707: response to other organism | 2.30E-02 |
| 95 | GO:0009644: response to high light intensity | 2.43E-02 |
| 96 | GO:0009409: response to cold | 3.09E-02 |
| 97 | GO:0009553: embryo sac development | 3.58E-02 |
| 98 | GO:0006396: RNA processing | 3.73E-02 |
| 99 | GO:0055114: oxidation-reduction process | 4.01E-02 |
| 100 | GO:0009555: pollen development | 4.03E-02 |
| 101 | GO:0009790: embryo development | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 2 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 3 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 4 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 5 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 6 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 7 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 8 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 9 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 10 | GO:0016168: chlorophyll binding | 9.04E-05 |
| 11 | GO:0042736: NADH kinase activity | 1.04E-04 |
| 12 | GO:0042586: peptide deformylase activity | 1.04E-04 |
| 13 | GO:0008047: enzyme activator activity | 1.37E-04 |
| 14 | GO:0019156: isoamylase activity | 2.44E-04 |
| 15 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.44E-04 |
| 16 | GO:0047746: chlorophyllase activity | 2.44E-04 |
| 17 | GO:0052832: inositol monophosphate 3-phosphatase activity | 2.44E-04 |
| 18 | GO:0008934: inositol monophosphate 1-phosphatase activity | 2.44E-04 |
| 19 | GO:0052833: inositol monophosphate 4-phosphatase activity | 2.44E-04 |
| 20 | GO:0030385: ferredoxin:thioredoxin reductase activity | 2.44E-04 |
| 21 | GO:0016630: protochlorophyllide reductase activity | 2.44E-04 |
| 22 | GO:0004857: enzyme inhibitor activity | 3.40E-04 |
| 23 | GO:0004751: ribose-5-phosphate isomerase activity | 4.05E-04 |
| 24 | GO:0022891: substrate-specific transmembrane transporter activity | 4.92E-04 |
| 25 | GO:0047134: protein-disulfide reductase activity | 5.78E-04 |
| 26 | GO:0048487: beta-tubulin binding | 5.82E-04 |
| 27 | GO:0016149: translation release factor activity, codon specific | 5.82E-04 |
| 28 | GO:0015035: protein disulfide oxidoreductase activity | 5.93E-04 |
| 29 | GO:0004791: thioredoxin-disulfide reductase activity | 7.18E-04 |
| 30 | GO:0016279: protein-lysine N-methyltransferase activity | 7.73E-04 |
| 31 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 7.73E-04 |
| 32 | GO:0004045: aminoacyl-tRNA hydrolase activity | 7.73E-04 |
| 33 | GO:0080032: methyl jasmonate esterase activity | 7.73E-04 |
| 34 | GO:0043495: protein anchor | 7.73E-04 |
| 35 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 9.28E-04 |
| 36 | GO:0004556: alpha-amylase activity | 1.19E-03 |
| 37 | GO:0004462: lactoylglutathione lyase activity | 1.19E-03 |
| 38 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.19E-03 |
| 39 | GO:0080030: methyl indole-3-acetate esterase activity | 1.19E-03 |
| 40 | GO:0042578: phosphoric ester hydrolase activity | 1.19E-03 |
| 41 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.43E-03 |
| 42 | GO:0019899: enzyme binding | 1.67E-03 |
| 43 | GO:0004033: aldo-keto reductase (NADP) activity | 1.93E-03 |
| 44 | GO:0003951: NAD+ kinase activity | 2.21E-03 |
| 45 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 2.21E-03 |
| 46 | GO:0003747: translation release factor activity | 2.49E-03 |
| 47 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.84E-03 |
| 48 | GO:0004805: trehalose-phosphatase activity | 3.10E-03 |
| 49 | GO:0015020: glucuronosyltransferase activity | 3.10E-03 |
| 50 | GO:0044183: protein binding involved in protein folding | 3.42E-03 |
| 51 | GO:0004521: endoribonuclease activity | 3.75E-03 |
| 52 | GO:0008083: growth factor activity | 4.44E-03 |
| 53 | GO:0031409: pigment binding | 5.18E-03 |
| 54 | GO:0004407: histone deacetylase activity | 5.56E-03 |
| 55 | GO:0005528: FK506 binding | 5.56E-03 |
| 56 | GO:0042802: identical protein binding | 1.02E-02 |
| 57 | GO:0048038: quinone binding | 1.04E-02 |
| 58 | GO:0102483: scopolin beta-glucosidase activity | 1.51E-02 |
| 59 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.62E-02 |
| 60 | GO:0003993: acid phosphatase activity | 1.98E-02 |
| 61 | GO:0008422: beta-glucosidase activity | 2.04E-02 |
| 62 | GO:0043621: protein self-association | 2.43E-02 |
| 63 | GO:0005198: structural molecule activity | 2.50E-02 |
| 64 | GO:0031625: ubiquitin protein ligase binding | 3.06E-02 |
| 65 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.43E-02 |
| 66 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.43E-02 |
| 67 | GO:0016758: transferase activity, transferring hexosyl groups | 4.21E-02 |
| 68 | GO:0019843: rRNA binding | 4.29E-02 |
| 69 | GO:0016829: lyase activity | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 9.25E-28 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 7.56E-20 |
| 4 | GO:0009534: chloroplast thylakoid | 3.08E-16 |
| 5 | GO:0009570: chloroplast stroma | 5.85E-09 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 1.67E-07 |
| 7 | GO:0009538: photosystem I reaction center | 5.79E-07 |
| 8 | GO:0009579: thylakoid | 6.35E-07 |
| 9 | GO:0030095: chloroplast photosystem II | 5.95E-06 |
| 10 | GO:0009941: chloroplast envelope | 2.66E-05 |
| 11 | GO:0009523: photosystem II | 4.23E-05 |
| 12 | GO:0010287: plastoglobule | 7.05E-05 |
| 13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 9.49E-05 |
| 14 | GO:0031977: thylakoid lumen | 2.20E-04 |
| 15 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 2.44E-04 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 3.76E-04 |
| 17 | GO:0019898: extrinsic component of membrane | 7.69E-04 |
| 18 | GO:0009707: chloroplast outer membrane | 1.51E-03 |
| 19 | GO:0032040: small-subunit processome | 3.75E-03 |
| 20 | GO:0009508: plastid chromosome | 4.09E-03 |
| 21 | GO:0030076: light-harvesting complex | 4.80E-03 |
| 22 | GO:0042651: thylakoid membrane | 5.95E-03 |
| 23 | GO:0009522: photosystem I | 9.42E-03 |
| 24 | GO:0010319: stromule | 1.24E-02 |
| 25 | GO:0009295: nucleoid | 1.24E-02 |
| 26 | GO:0030529: intracellular ribonucleoprotein complex | 1.35E-02 |
| 27 | GO:0031969: chloroplast membrane | 1.54E-02 |
| 28 | GO:0000151: ubiquitin ligase complex | 1.62E-02 |
| 29 | GO:0005623: cell | 4.37E-02 |