gene detail

Gene description

TAIR ID: AT4G37240

No short description

Pathogen responsiveness: 0.23

General responsiveness: 0.83

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

cellular_component

GO molecular function

molecular_function

Protein domain

Pfam	PF14009, Domain of unknown function (DUF4228)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G53660, AT5G13790, AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 8

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

20 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	1.51	1.93E-02
GSE13739	Col, eds, control 0 h	Col, eds, G.orontii 6 h	1.90	2.77E-03
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	-3.24	5.64E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	-2.53	4.96E-08
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.81	5.85E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-3.84	5.53E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.63	2.08E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-3.87	7.09E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-3.26	6.70E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-3.06	1.94E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-3.80	6.25E-12
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-2.29	5.42E-09
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.14	1.57E-08
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.64	2.92E-10
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	-2.54	1.66E-09
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-3.07	3.43E-02
GSE5520	Col, WT, control 24 h	Col, WT, PsDC3118 Cor- 24 h	-1.66	3.78E-03
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-1.93	4.36E-04
GSE5616	Col, WT, water 24 h	Col, WT, P. infestans 24 h	-1.91	1.79E-05
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	-1.66	2.19E-05