Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G37240

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006792: regulation of sulfur utilization0.00E+00
2GO:1901485: positive regulation of transcription factor catabolic process0.00E+00
3GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
4GO:0010411: xyloglucan metabolic process6.47E-07
5GO:0010200: response to chitin2.58E-06
6GO:0042546: cell wall biogenesis3.53E-06
7GO:0071555: cell wall organization8.87E-06
8GO:0009751: response to salicylic acid7.33E-05
9GO:0000271: polysaccharide biosynthetic process9.40E-05
10GO:0045489: pectin biosynthetic process1.05E-04
11GO:0010583: response to cyclopentenone1.58E-04
12GO:0033481: galacturonate biosynthetic process1.80E-04
13GO:0019354: siroheme biosynthetic process1.80E-04
14GO:0009962: regulation of flavonoid biosynthetic process1.80E-04
15GO:2000029: regulation of proanthocyanidin biosynthetic process1.80E-04
16GO:0050691: regulation of defense response to virus by host1.80E-04
17GO:0030154: cell differentiation3.69E-04
18GO:0031542: positive regulation of anthocyanin biosynthetic process4.05E-04
19GO:0071497: cellular response to freezing4.05E-04
20GO:0019419: sulfate reduction6.61E-04
21GO:0010581: regulation of starch biosynthetic process6.61E-04
22GO:0080168: abscisic acid transport6.61E-04
23GO:0006357: regulation of transcription from RNA polymerase II promoter7.77E-04
24GO:0031347: regulation of defense response8.21E-04
25GO:2000022: regulation of jasmonic acid mediated signaling pathway9.27E-04
26GO:1902358: sulfate transmembrane transport9.45E-04
27GO:0019722: calcium-mediated signaling1.09E-03
28GO:0046345: abscisic acid catabolic process1.25E-03
29GO:0009741: response to brassinosteroid1.37E-03
30GO:0010438: cellular response to sulfur starvation1.59E-03
31GO:2000762: regulation of phenylpropanoid metabolic process1.59E-03
32GO:0060918: auxin transport1.96E-03
33GO:1900425: negative regulation of defense response to bacterium1.96E-03
34GO:0009828: plant-type cell wall loosening2.03E-03
35GO:0007267: cell-cell signaling2.16E-03
36GO:0009753: response to jasmonic acid2.56E-03
37GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.56E-03
38GO:0051510: regulation of unidimensional cell growth2.77E-03
39GO:0050829: defense response to Gram-negative bacterium2.77E-03
40GO:0006400: tRNA modification2.77E-03
41GO:2000070: regulation of response to water deprivation3.21E-03
42GO:0030162: regulation of proteolysis3.21E-03
43GO:0010439: regulation of glucosinolate biosynthetic process3.21E-03
44GO:2000031: regulation of salicylic acid mediated signaling pathway3.67E-03
45GO:0016051: carbohydrate biosynthetic process3.98E-03
46GO:0051865: protein autoubiquitination4.15E-03
47GO:0009638: phototropism4.65E-03
48GO:0006779: porphyrin-containing compound biosynthetic process4.65E-03
49GO:0009826: unidimensional cell growth4.81E-03
50GO:0043069: negative regulation of programmed cell death5.18E-03
51GO:0000103: sulfate assimilation5.18E-03
52GO:0009733: response to auxin5.46E-03
53GO:0010015: root morphogenesis5.72E-03
54GO:0000038: very long-chain fatty acid metabolic process5.72E-03
55GO:2000652: regulation of secondary cell wall biogenesis5.72E-03
56GO:1903507: negative regulation of nucleic acid-templated transcription5.72E-03
57GO:0000272: polysaccharide catabolic process5.72E-03
58GO:0009723: response to ethylene6.07E-03
59GO:0016925: protein sumoylation6.28E-03
60GO:0016024: CDP-diacylglycerol biosynthetic process6.28E-03
61GO:0030036: actin cytoskeleton organization6.86E-03
62GO:0018107: peptidyl-threonine phosphorylation6.86E-03
63GO:0009718: anthocyanin-containing compound biosynthetic process6.86E-03
64GO:0034605: cellular response to heat7.46E-03
65GO:0010143: cutin biosynthetic process7.46E-03
66GO:0002237: response to molecule of bacterial origin7.46E-03
67GO:0009969: xyloglucan biosynthetic process8.08E-03
68GO:0009225: nucleotide-sugar metabolic process8.08E-03
69GO:0045454: cell redox homeostasis8.34E-03
70GO:0005992: trehalose biosynthetic process9.37E-03
71GO:0019344: cysteine biosynthetic process9.37E-03
72GO:0019953: sexual reproduction1.00E-02
73GO:0010026: trichome differentiation1.00E-02
74GO:0016998: cell wall macromolecule catabolic process1.07E-02
75GO:0010017: red or far-red light signaling pathway1.14E-02
76GO:0040007: growth1.22E-02
77GO:0010214: seed coat development1.29E-02
78GO:0010087: phloem or xylem histogenesis1.44E-02
79GO:0048653: anther development1.44E-02
80GO:0010268: brassinosteroid homeostasis1.52E-02
81GO:0009958: positive gravitropism1.52E-02
82GO:0040008: regulation of growth1.63E-02
83GO:0009791: post-embryonic development1.68E-02
84GO:0016132: brassinosteroid biosynthetic process1.77E-02
85GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.77E-02
86GO:0002229: defense response to oomycetes1.77E-02
87GO:0009739: response to gibberellin1.91E-02
88GO:0016125: sterol metabolic process2.03E-02
89GO:0019760: glucosinolate metabolic process2.03E-02
90GO:0009639: response to red or far red light2.03E-02
91GO:0009738: abscisic acid-activated signaling pathway2.16E-02
92GO:0001666: response to hypoxia2.30E-02
93GO:0006355: regulation of transcription, DNA-templated2.36E-02
94GO:0016311: dephosphorylation2.68E-02
95GO:0009860: pollen tube growth2.85E-02
96GO:0048767: root hair elongation2.87E-02
97GO:0009813: flavonoid biosynthetic process2.87E-02
98GO:0010218: response to far red light2.97E-02
99GO:0007568: aging3.08E-02
100GO:0048527: lateral root development3.08E-02
101GO:0080167: response to karrikin3.27E-02
102GO:0009637: response to blue light3.28E-02
103GO:0009867: jasmonic acid mediated signaling pathway3.28E-02
104GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.39E-02
105GO:0042542: response to hydrogen peroxide3.82E-02
106GO:0010114: response to red light3.93E-02
107GO:0006855: drug transmembrane transport4.39E-02
108GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.50E-02
109GO:0009664: plant-type cell wall organization4.62E-02
110GO:0006629: lipid metabolic process4.81E-02
111GO:0009737: response to abscisic acid4.85E-02
112GO:0009809: lignin biosynthetic process4.86E-02
113GO:0006486: protein glycosylation4.86E-02
114GO:0009585: red, far-red light phototransduction4.86E-02
115GO:0051603: proteolysis involved in cellular protein catabolic process4.98E-02
RankGO TermAdjusted P value
1GO:0047890: flavanone 4-reductase activity0.00E+00
2GO:0004851: uroporphyrin-III C-methyltransferase activity0.00E+00
3GO:0045552: dihydrokaempferol 4-reductase activity0.00E+00
4GO:0016762: xyloglucan:xyloglucosyl transferase activity6.11E-06
5GO:0016798: hydrolase activity, acting on glycosyl bonds1.90E-05
6GO:0080132: fatty acid alpha-hydroxylase activity1.80E-04
7GO:0090440: abscisic acid transporter activity1.80E-04
8GO:0044212: transcription regulatory region DNA binding3.02E-04
9GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.22E-04
10GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.92E-04
11GO:0033741: adenylyl-sulfate reductase (glutathione) activity4.05E-04
12GO:0048531: beta-1,3-galactosyltransferase activity4.05E-04
13GO:0009973: adenylyl-sulfate reductase activity4.05E-04
14GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity4.05E-04
15GO:0010295: (+)-abscisic acid 8'-hydroxylase activity6.61E-04
16GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity9.27E-04
17GO:0033843: xyloglucan 6-xylosyltransferase activity9.45E-04
18GO:0050378: UDP-glucuronate 4-epimerase activity1.25E-03
19GO:0016757: transferase activity, transferring glycosyl groups1.50E-03
20GO:0031386: protein tag1.59E-03
21GO:0016758: transferase activity, transferring hexosyl groups1.86E-03
22GO:0010427: abscisic acid binding1.96E-03
23GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.96E-03
24GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.96E-03
25GO:0035252: UDP-xylosyltransferase activity1.96E-03
26GO:0016759: cellulose synthase activity2.03E-03
27GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.10E-03
28GO:0016161: beta-amylase activity2.35E-03
29GO:0016621: cinnamoyl-CoA reductase activity2.77E-03
30GO:0008271: secondary active sulfate transmembrane transporter activity3.67E-03
31GO:0043565: sequence-specific DNA binding3.95E-03
32GO:0004805: trehalose-phosphatase activity5.18E-03
33GO:0004864: protein phosphatase inhibitor activity5.18E-03
34GO:0015116: sulfate transmembrane transporter activity6.28E-03
35GO:0000976: transcription regulatory region sequence-specific DNA binding6.28E-03
36GO:0046983: protein dimerization activity7.38E-03
37GO:0003712: transcription cofactor activity8.08E-03
38GO:0003714: transcription corepressor activity9.37E-03
39GO:0008134: transcription factor binding9.37E-03
40GO:0003700: transcription factor activity, sequence-specific DNA binding1.03E-02
41GO:0004402: histone acetyltransferase activity1.44E-02
42GO:0001085: RNA polymerase II transcription factor binding1.52E-02
43GO:0050662: coenzyme binding1.60E-02
44GO:0004872: receptor activity1.68E-02
45GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.94E-02
46GO:0016791: phosphatase activity2.03E-02
47GO:0016722: oxidoreductase activity, oxidizing metal ions2.11E-02
48GO:0005200: structural constituent of cytoskeleton2.11E-02
49GO:0004806: triglyceride lipase activity2.58E-02
50GO:0004674: protein serine/threonine kinase activity2.65E-02
51GO:0015238: drug transmembrane transporter activity2.87E-02
52GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.08E-02
53GO:0004185: serine-type carboxypeptidase activity3.93E-02
54GO:0004871: signal transducer activity4.10E-02
55GO:0015293: symporter activity4.27E-02
56GO:0016298: lipase activity4.98E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0009505: plant-type cell wall1.18E-04
3GO:0031225: anchored component of membrane1.59E-04
4GO:0005794: Golgi apparatus1.78E-04
5GO:0048046: apoplast5.78E-04
6GO:0042406: extrinsic component of endoplasmic reticulum membrane6.61E-04
7GO:0005618: cell wall2.16E-03
8GO:0000139: Golgi membrane2.17E-03
9GO:0005576: extracellular region3.03E-03
10GO:0005615: extracellular space3.34E-03
11GO:0046658: anchored component of plasma membrane4.14E-03
12GO:0009506: plasmodesma6.56E-03
13GO:0005802: trans-Golgi network1.13E-02
14GO:0005770: late endosome1.52E-02
15GO:0032580: Golgi cisterna membrane2.03E-02
16GO:0005667: transcription factor complex2.48E-02
17GO:0019005: SCF ubiquitin ligase complex2.77E-02
18GO:0005886: plasma membrane2.94E-02
19GO:0000786: nucleosome3.18E-02
20GO:0031902: late endosome membrane3.71E-02
21GO:0005856: cytoskeleton4.27E-02
22GO:0005768: endosome4.72E-02
Gene type



Gene DE type