Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G37240

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080127: fruit septum development0.00E+00
2GO:1901485: positive regulation of transcription factor catabolic process0.00E+00
3GO:0000271: polysaccharide biosynthetic process1.28E-05
4GO:0010411: xyloglucan metabolic process4.86E-05
5GO:0080164: regulation of nitric oxide metabolic process7.07E-05
6GO:0019354: siroheme biosynthetic process7.07E-05
7GO:0042546: cell wall biogenesis1.26E-04
8GO:0071497: cellular response to freezing1.70E-04
9GO:0051592: response to calcium ion1.70E-04
10GO:0010200: response to chitin1.84E-04
11GO:0033591: response to L-ascorbic acid2.86E-04
12GO:0006556: S-adenosylmethionine biosynthetic process2.86E-04
13GO:0019722: calcium-mediated signaling3.21E-04
14GO:0009741: response to brassinosteroid4.06E-04
15GO:0045489: pectin biosynthetic process4.06E-04
16GO:0032456: endocytic recycling4.15E-04
17GO:0071555: cell wall organization4.67E-04
18GO:0009873: ethylene-activated signaling pathway4.92E-04
19GO:0046345: abscisic acid catabolic process5.53E-04
20GO:0009828: plant-type cell wall loosening6.02E-04
21GO:0007267: cell-cell signaling6.38E-04
22GO:2000762: regulation of phenylpropanoid metabolic process7.00E-04
23GO:0060918: auxin transport8.57E-04
24GO:1900425: negative regulation of defense response to bacterium8.57E-04
25GO:0003006: developmental process involved in reproduction8.57E-04
26GO:0006555: methionine metabolic process8.57E-04
27GO:0009826: unidimensional cell growth9.69E-04
28GO:0009612: response to mechanical stimulus1.02E-03
29GO:0009554: megasporogenesis1.02E-03
30GO:0016051: carbohydrate biosynthetic process1.15E-03
31GO:0051510: regulation of unidimensional cell growth1.19E-03
32GO:0010038: response to metal ion1.19E-03
33GO:0030162: regulation of proteolysis1.37E-03
34GO:0042542: response to hydrogen peroxide1.41E-03
35GO:0048574: long-day photoperiodism, flowering1.56E-03
36GO:0051865: protein autoubiquitination1.76E-03
37GO:0048507: meristem development1.76E-03
38GO:0006779: porphyrin-containing compound biosynthetic process1.97E-03
39GO:0009751: response to salicylic acid2.12E-03
40GO:0043069: negative regulation of programmed cell death2.19E-03
41GO:1903507: negative regulation of nucleic acid-templated transcription2.41E-03
42GO:0000038: very long-chain fatty acid metabolic process2.41E-03
43GO:0016024: CDP-diacylglycerol biosynthetic process2.64E-03
44GO:0010582: floral meristem determinacy2.64E-03
45GO:0009733: response to auxin2.74E-03
46GO:0018107: peptidyl-threonine phosphorylation2.88E-03
47GO:0048467: gynoecium development3.12E-03
48GO:0034605: cellular response to heat3.12E-03
49GO:0010143: cutin biosynthetic process3.12E-03
50GO:0009969: xyloglucan biosynthetic process3.37E-03
51GO:0009409: response to cold3.64E-03
52GO:0005992: trehalose biosynthetic process3.89E-03
53GO:0019953: sexual reproduction4.17E-03
54GO:0016998: cell wall macromolecule catabolic process4.44E-03
55GO:2000022: regulation of jasmonic acid mediated signaling pathway4.73E-03
56GO:0006730: one-carbon metabolic process4.73E-03
57GO:0040007: growth5.02E-03
58GO:0010268: brassinosteroid homeostasis6.24E-03
59GO:0009646: response to absence of light6.56E-03
60GO:0009791: post-embryonic development6.89E-03
61GO:0016132: brassinosteroid biosynthetic process7.22E-03
62GO:0002229: defense response to oomycetes7.22E-03
63GO:0010583: response to cyclopentenone7.56E-03
64GO:0009639: response to red or far red light8.25E-03
65GO:0016125: sterol metabolic process8.25E-03
66GO:0080167: response to karrikin9.13E-03
67GO:0001666: response to hypoxia9.34E-03
68GO:0009788: negative regulation of abscisic acid-activated signaling pathway9.71E-03
69GO:0016311: dephosphorylation1.09E-02
70GO:0048767: root hair elongation1.17E-02
71GO:0030154: cell differentiation1.22E-02
72GO:0048527: lateral root development1.25E-02
73GO:0045087: innate immune response1.33E-02
74GO:0009753: response to jasmonic acid1.45E-02
75GO:0031347: regulation of defense response1.82E-02
76GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.82E-02
77GO:0009664: plant-type cell wall organization1.87E-02
78GO:0009809: lignin biosynthetic process1.97E-02
79GO:0006486: protein glycosylation1.97E-02
80GO:0009909: regulation of flower development2.11E-02
81GO:0009416: response to light stimulus2.40E-02
82GO:0018105: peptidyl-serine phosphorylation2.58E-02
83GO:0009742: brassinosteroid mediated signaling pathway2.63E-02
84GO:0042744: hydrogen peroxide catabolic process3.25E-02
85GO:0006633: fatty acid biosynthetic process3.49E-02
86GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.04E-02
87GO:0006470: protein dephosphorylation4.10E-02
88GO:0016567: protein ubiquitination4.39E-02
89GO:0009414: response to water deprivation4.72E-02
90GO:0006468: protein phosphorylation4.89E-02
RankGO TermAdjusted P value
1GO:0004851: uroporphyrin-III C-methyltransferase activity0.00E+00
2GO:0080132: fatty acid alpha-hydroxylase activity7.07E-05
3GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.70E-04
4GO:0010295: (+)-abscisic acid 8'-hydroxylase activity2.86E-04
5GO:0004478: methionine adenosyltransferase activity2.86E-04
6GO:0016758: transferase activity, transferring hexosyl groups3.80E-04
7GO:0033843: xyloglucan 6-xylosyltransferase activity4.15E-04
8GO:0016762: xyloglucan:xyloglucosyl transferase activity4.99E-04
9GO:0002020: protease binding7.00E-04
10GO:0016798: hydrolase activity, acting on glycosyl bonds8.34E-04
11GO:0035252: UDP-xylosyltransferase activity8.57E-04
12GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity8.57E-04
13GO:0004366: glycerol-3-phosphate O-acyltransferase activity8.57E-04
14GO:0019900: kinase binding1.02E-03
15GO:0004805: trehalose-phosphatase activity2.19E-03
16GO:0003712: transcription cofactor activity3.37E-03
17GO:0008134: transcription factor binding3.89E-03
18GO:0003714: transcription corepressor activity3.89E-03
19GO:0016757: transferase activity, transferring glycosyl groups3.98E-03
20GO:0004402: histone acetyltransferase activity5.93E-03
21GO:0016759: cellulose synthase activity8.25E-03
22GO:0016791: phosphatase activity8.25E-03
23GO:0016722: oxidoreductase activity, oxidizing metal ions8.61E-03
24GO:0004871: signal transducer activity1.15E-02
25GO:0043621: protein self-association1.68E-02
26GO:0016298: lipase activity2.01E-02
27GO:0031625: ubiquitin protein ligase binding2.11E-02
28GO:0004674: protein serine/threonine kinase activity2.55E-02
29GO:0015035: protein disulfide oxidoreductase activity2.58E-02
30GO:0016746: transferase activity, transferring acyl groups2.58E-02
31GO:0043565: sequence-specific DNA binding2.69E-02
32GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.17E-02
33GO:0005516: calmodulin binding3.61E-02
34GO:0005506: iron ion binding4.76E-02
35GO:0044212: transcription regulatory region DNA binding4.84E-02
36GO:0008168: methyltransferase activity4.95E-02
RankGO TermAdjusted P value
1GO:0009505: plant-type cell wall1.27E-04
2GO:0031225: anchored component of membrane2.89E-04
3GO:0048046: apoplast2.96E-04
4GO:0005794: Golgi apparatus3.94E-04
5GO:0035619: root hair tip4.15E-04
6GO:0005576: extracellular region5.88E-04
7GO:0005615: extracellular space6.80E-04
8GO:0032588: trans-Golgi network membrane8.57E-04
9GO:0005618: cell wall1.40E-03
10GO:0009506: plasmodesma1.69E-03
11GO:0031901: early endosome membrane1.76E-03
12GO:0000139: Golgi membrane3.64E-03
13GO:0015629: actin cytoskeleton5.02E-03
14GO:0005886: plasma membrane6.99E-03
15GO:0016021: integral component of membrane8.29E-03
16GO:0019005: SCF ubiquitin ligase complex1.13E-02
17GO:0046658: anchored component of plasma membrane4.55E-02
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Gene type



Gene DE type