Gene: AT4G29190
     


Gene description


TAIR ID: AT4G29190

Short description: Zinc finger C-x8-C-x5-C-x3-H type family protein

Pathogen responsiveness: -0.18

General responsiveness: 0.16

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated


GO cellular component


plasma membrane, nucleus


GO molecular function


metal ion binding, DNA binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00642, Zinc finger C-x8-C-x5-C-x3-H type (and similar)
SMARTSM00356, ZnF_C3H1

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36920, AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


18 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h-1.669.88E-09
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d2.121.89E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.635.12E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.109.85E-06
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.048.12E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.545.13E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.816.17E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.984.12E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.902.99E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.853.47E-10
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.482.27E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.581.94E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.091.22E-10
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-1.784.30E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.621.18E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.227.99E-05
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.955.83E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min-2.625.42E-03






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