Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G29190

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090627: plant epidermal cell differentiation0.00E+00
2GO:0000025: maltose catabolic process0.00E+00
3GO:0009913: epidermal cell differentiation9.15E-06
4GO:0071902: positive regulation of protein serine/threonine kinase activity5.79E-05
5GO:0032958: inositol phosphate biosynthetic process5.79E-05
6GO:0000023: maltose metabolic process5.79E-05
7GO:0005980: glycogen catabolic process5.79E-05
8GO:0005983: starch catabolic process7.94E-05
9GO:0009266: response to temperature stimulus1.06E-04
10GO:0005976: polysaccharide metabolic process1.41E-04
11GO:0071712: ER-associated misfolded protein catabolic process1.41E-04
12GO:0032527: protein exit from endoplasmic reticulum1.41E-04
13GO:0051170: nuclear import1.41E-04
14GO:0010017: red or far-red light signaling pathway2.06E-04
15GO:0010506: regulation of autophagy2.40E-04
16GO:0071230: cellular response to amino acid stimulus2.40E-04
17GO:0031929: TOR signaling2.40E-04
18GO:0032940: secretion by cell2.40E-04
19GO:0010321: regulation of vegetative phase change3.49E-04
20GO:0006020: inositol metabolic process3.49E-04
21GO:0048825: cotyledon development3.61E-04
22GO:1901657: glycosyl compound metabolic process4.39E-04
23GO:0010023: proanthocyanidin biosynthetic process4.66E-04
24GO:0010600: regulation of auxin biosynthetic process4.66E-04
25GO:0048497: maintenance of floral organ identity5.92E-04
26GO:0009267: cellular response to starvation7.24E-04
27GO:0000160: phosphorelay signal transduction system7.51E-04
28GO:0009631: cold acclimation8.23E-04
29GO:0009861: jasmonic acid and ethylene-dependent systemic resistance8.63E-04
30GO:0010244: response to low fluence blue light stimulus by blue low-fluence system8.63E-04
31GO:0030307: positive regulation of cell growth1.01E-03
32GO:0010161: red light signaling pathway1.01E-03
33GO:0009704: de-etiolation1.16E-03
34GO:0009061: anaerobic respiration1.16E-03
35GO:0010928: regulation of auxin mediated signaling pathway1.16E-03
36GO:0006353: DNA-templated transcription, termination1.16E-03
37GO:0009414: response to water deprivation1.48E-03
38GO:0042761: very long-chain fatty acid biosynthetic process1.65E-03
39GO:0010015: root morphogenesis2.02E-03
40GO:0008361: regulation of cell size2.21E-03
41GO:0006355: regulation of transcription, DNA-templated2.27E-03
42GO:0006006: glucose metabolic process2.41E-03
43GO:0009718: anthocyanin-containing compound biosynthetic process2.41E-03
44GO:0006094: gluconeogenesis2.41E-03
45GO:0009845: seed germination2.89E-03
46GO:0005975: carbohydrate metabolic process2.89E-03
47GO:0010025: wax biosynthetic process3.04E-03
48GO:0007017: microtubule-based process3.49E-03
49GO:0007623: circadian rhythm3.68E-03
50GO:0045490: pectin catabolic process3.68E-03
51GO:0051260: protein homooligomerization3.72E-03
52GO:0048511: rhythmic process3.72E-03
53GO:0061077: chaperone-mediated protein folding3.72E-03
54GO:0009686: gibberellin biosynthetic process4.20E-03
55GO:0006351: transcription, DNA-templated4.31E-03
56GO:0080167: response to karrikin7.02E-03
57GO:0016126: sterol biosynthetic process7.78E-03
58GO:0009607: response to biotic stimulus8.08E-03
59GO:0045454: cell redox homeostasis8.40E-03
60GO:0045892: negative regulation of transcription, DNA-templated8.54E-03
61GO:0006950: response to stress8.71E-03
62GO:0016049: cell growth9.03E-03
63GO:0009817: defense response to fungus, incompatible interaction9.36E-03
64GO:0010218: response to far red light1.00E-02
65GO:0009409: response to cold1.15E-02
66GO:0010114: response to red light1.32E-02
67GO:0009640: photomorphogenesis1.32E-02
68GO:0009644: response to high light intensity1.40E-02
69GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.51E-02
70GO:0009585: red, far-red light phototransduction1.63E-02
71GO:0006813: potassium ion transport1.63E-02
72GO:0006096: glycolytic process1.84E-02
73GO:0009740: gibberellic acid mediated signaling pathway2.01E-02
74GO:0006511: ubiquitin-dependent protein catabolic process2.51E-02
75GO:0009739: response to gibberellin3.35E-02
76GO:0009651: response to salt stress3.58E-02
77GO:0006979: response to oxidative stress3.76E-02
78GO:0006970: response to osmotic stress4.45E-02
79GO:0009723: response to ethylene4.68E-02
RankGO TermAdjusted P value
1GO:0004134: 4-alpha-glucanotransferase activity0.00E+00
2GO:0080082: esculin beta-glucosidase activity0.00E+00
3GO:0009899: ent-kaurene synthase activity0.00E+00
4GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
5GO:0047668: amygdalin beta-glucosidase activity0.00E+00
6GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
7GO:0004567: beta-mannosidase activity0.00E+00
8GO:0004645: phosphorylase activity5.79E-05
9GO:0033857: diphosphoinositol-pentakisphosphate kinase activity5.79E-05
10GO:0000829: inositol heptakisphosphate kinase activity5.79E-05
11GO:0080079: cellobiose glucosidase activity5.79E-05
12GO:0008184: glycogen phosphorylase activity5.79E-05
13GO:0000828: inositol hexakisphosphate kinase activity5.79E-05
14GO:0044390: ubiquitin-like protein conjugating enzyme binding1.41E-04
15GO:0016868: intramolecular transferase activity, phosphotransferases1.41E-04
16GO:0010297: heteropolysaccharide binding1.41E-04
17GO:0030570: pectate lyase activity2.26E-04
18GO:0003677: DNA binding3.50E-04
19GO:0000156: phosphorelay response regulator activity4.39E-04
20GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway4.66E-04
21GO:0004506: squalene monooxygenase activity4.66E-04
22GO:0102483: scopolin beta-glucosidase activity6.49E-04
23GO:2001070: starch binding7.24E-04
24GO:0004332: fructose-bisphosphate aldolase activity7.24E-04
25GO:0008422: beta-glucosidase activity9.76E-04
26GO:0030674: protein binding, bridging1.16E-03
27GO:0003700: transcription factor activity, sequence-specific DNA binding1.54E-03
28GO:0044183: protein binding involved in protein folding2.02E-03
29GO:0047372: acylglycerol lipase activity2.02E-03
30GO:0015035: protein disulfide oxidoreductase activity2.21E-03
31GO:0008289: lipid binding2.35E-03
32GO:0004022: alcohol dehydrogenase (NAD) activity2.41E-03
33GO:0004565: beta-galactosidase activity2.41E-03
34GO:0016829: lyase activity2.89E-03
35GO:0005249: voltage-gated potassium channel activity4.95E-03
36GO:0043565: sequence-specific DNA binding5.09E-03
37GO:0005200: structural constituent of cytoskeleton7.18E-03
38GO:0009055: electron carrier activity1.11E-02
39GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.88E-02
40GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.44E-02
41GO:0030170: pyridoxal phosphate binding2.65E-02
42GO:0004252: serine-type endopeptidase activity2.65E-02
43GO:0000287: magnesium ion binding4.17E-02
44GO:0016788: hydrolase activity, acting on ester bonds4.28E-02
45GO:0050660: flavin adenine dinucleotide binding4.68E-02
RankGO TermAdjusted P value
1GO:0031931: TORC1 complex2.40E-04
2GO:0036513: Derlin-1 retrotranslocation complex3.49E-04
3GO:0008076: voltage-gated potassium channel complex3.49E-04
4GO:0009501: amyloplast1.16E-03
5GO:0010494: cytoplasmic stress granule1.48E-03
6GO:0045298: tubulin complex1.48E-03
7GO:0009505: plant-type cell wall2.16E-03
8GO:0000932: P-body7.78E-03
9GO:0009570: chloroplast stroma7.84E-03
10GO:0031966: mitochondrial membrane1.55E-02
11GO:0005834: heterotrimeric G-protein complex1.92E-02
12GO:0005623: cell2.51E-02
13GO:0005576: extracellular region2.63E-02
14GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.51E-02
15GO:0009536: plastid4.57E-02
16GO:0005874: microtubule4.80E-02
<
Gene type



Gene DE type