Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G29190

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
2GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
3GO:0010401: pectic galactan metabolic process0.00E+00
4GO:0010150: leaf senescence8.05E-07
5GO:0016337: single organismal cell-cell adhesion1.48E-05
6GO:0048482: plant ovule morphogenesis1.48E-05
7GO:0015969: guanosine tetraphosphate metabolic process1.48E-05
8GO:0052541: plant-type cell wall cellulose metabolic process3.88E-05
9GO:0015012: heparan sulfate proteoglycan biosynthetic process3.88E-05
10GO:0006024: glycosaminoglycan biosynthetic process3.88E-05
11GO:0046621: negative regulation of organ growth6.95E-05
12GO:0006624: vacuolar protein processing1.05E-04
13GO:0010508: positive regulation of autophagy1.45E-04
14GO:0042594: response to starvation1.45E-04
15GO:0006665: sphingolipid metabolic process1.88E-04
16GO:0048317: seed morphogenesis2.34E-04
17GO:0006333: chromatin assembly or disassembly3.32E-04
18GO:0009611: response to wounding3.73E-04
19GO:0032875: regulation of DNA endoreduplication3.84E-04
20GO:0010120: camalexin biosynthetic process4.37E-04
21GO:0030968: endoplasmic reticulum unfolded protein response4.37E-04
22GO:0010072: primary shoot apical meristem specification6.67E-04
23GO:0006970: response to osmotic stress1.13E-03
24GO:0009693: ethylene biosynthetic process1.34E-03
25GO:0046777: protein autophosphorylation1.38E-03
26GO:0010087: phloem or xylem histogenesis1.57E-03
27GO:0006623: protein targeting to vacuole1.81E-03
28GO:0009751: response to salicylic acid1.86E-03
29GO:0006635: fatty acid beta-oxidation1.89E-03
30GO:0006464: cellular protein modification process2.15E-03
31GO:0006914: autophagy2.15E-03
32GO:0009873: ethylene-activated signaling pathway2.42E-03
33GO:0010029: regulation of seed germination2.52E-03
34GO:0009816: defense response to bacterium, incompatible interaction2.52E-03
35GO:0008219: cell death2.90E-03
36GO:0009738: abscisic acid-activated signaling pathway3.20E-03
37GO:0006099: tricarboxylic acid cycle3.50E-03
38GO:0006486: protein glycosylation4.95E-03
39GO:0051603: proteolysis involved in cellular protein catabolic process5.07E-03
40GO:0009620: response to fungus5.93E-03
41GO:0006979: response to oxidative stress6.71E-03
42GO:0009845: seed germination7.79E-03
43GO:0006355: regulation of transcription, DNA-templated9.77E-03
44GO:0008380: RNA splicing1.04E-02
45GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.19E-02
46GO:0009723: response to ethylene1.39E-02
47GO:0009737: response to abscisic acid1.42E-02
48GO:0006351: transcription, DNA-templated1.48E-02
49GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.50E-02
50GO:0010200: response to chitin1.50E-02
51GO:0044550: secondary metabolite biosynthetic process1.55E-02
52GO:0006886: intracellular protein transport1.70E-02
53GO:0050832: defense response to fungus1.99E-02
54GO:0006397: mRNA processing1.99E-02
55GO:0009753: response to jasmonic acid2.02E-02
56GO:0016567: protein ubiquitination2.04E-02
57GO:0006508: proteolysis2.06E-02
58GO:0009651: response to salt stress2.25E-02
59GO:0045893: positive regulation of transcription, DNA-templated3.20E-02
60GO:0009414: response to water deprivation4.71E-02
61GO:0042742: defense response to bacterium4.79E-02
RankGO TermAdjusted P value
1GO:0030295: protein kinase activator activity1.48E-05
2GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding3.88E-05
3GO:0008728: GTP diphosphokinase activity3.88E-05
4GO:0004108: citrate (Si)-synthase activity1.05E-04
5GO:0030527: structural constituent of chromatin1.05E-04
6GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.88E-04
7GO:0008113: peptide-methionine (S)-S-oxide reductase activity2.82E-04
8GO:0004708: MAP kinase kinase activity3.84E-04
9GO:0004521: endoribonuclease activity7.29E-04
10GO:0004175: endopeptidase activity8.55E-04
11GO:0043130: ubiquitin binding1.05E-03
12GO:0035251: UDP-glucosyltransferase activity1.19E-03
13GO:0004197: cysteine-type endopeptidase activity1.98E-03
14GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.24E-03
15GO:0008234: cysteine-type peptidase activity5.31E-03
16GO:0004674: protein serine/threonine kinase activity6.48E-03
17GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen7.51E-03
18GO:0016301: kinase activity7.68E-03
19GO:0003682: chromatin binding1.31E-02
20GO:0004497: monooxygenase activity1.46E-02
21GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.75E-02
22GO:0043565: sequence-specific DNA binding3.42E-02
23GO:0019825: oxygen binding3.73E-02
24GO:0005516: calmodulin binding3.88E-02
25GO:0005525: GTP binding4.14E-02
26GO:0003700: transcription factor activity, sequence-specific DNA binding4.44E-02
27GO:0005509: calcium ion binding4.53E-02
28GO:0005515: protein binding4.70E-02
29GO:0005506: iron ion binding4.74E-02
RankGO TermAdjusted P value
1GO:0000323: lytic vacuole1.81E-07
2GO:0042406: extrinsic component of endoplasmic reticulum membrane6.95E-05
3GO:0034045: pre-autophagosomal structure membrane4.37E-04
4GO:0030665: clathrin-coated vesicle membrane5.49E-04
5GO:0017119: Golgi transport complex6.08E-04
6GO:0000785: chromatin1.98E-03
7GO:0031902: late endosome membrane3.82E-03
8GO:0005802: trans-Golgi network5.27E-03
9GO:0005768: endosome5.99E-03
10GO:0000139: Golgi membrane9.02E-03
11GO:0005887: integral component of plasma membrane2.40E-02
12GO:0005777: peroxisome3.20E-02
13GO:0005773: vacuole3.55E-02
14GO:0005622: intracellular4.37E-02
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Gene type



Gene DE type