gene detail

Gene description

TAIR ID: AT4G28750

Short description: Photosystem I reaction centre subunit IV / PsaE protein

Pathogen responsiveness: -1.05

General responsiveness: 3.38

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G016066

Wheat: No orthologous gene

GO biological process

response to cytokinin, photosynthesis

GO cellular component

chloroplast thylakoid membrane, photosystem I reaction center, chloroplast thylakoid, thylakoid, chloroplast envelope, chloroplast, plastoglobule, membrane

GO molecular function

unkown

Protein domain

Pfam	PF02427, Photosystem I reaction centre subunit IV / PsaE

Metabolic pathway

PHOTOALL-PWY: oxygenic photosynthesis
PWY-101: photosynthesis light reactions

KEGG pathway

PATH:ath00195: Photosynthesis

Transcriptional regulation

Regulator:
AT1G24260, AT2G43010, AT2G47190

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.69	4.26E-08
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.93	2.39E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.99	1.42E-05
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.51	6.32E-13
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-2.16	3.47E-10
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.90	2.04E-08
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.97	4.98E-09
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	-1.78	1.76E-07
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-2.16	7.60E-10
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	-1.78	6.66E-07