Gene: AT4G28080
     

Gene description


TAIR ID: AT4G28080

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: 0.78

General responsiveness: 2.74

Orthologous


Rice:

OS04G0645100   OS02G0717400  

Maize:

GRMZM2G318635  

Wheat: No orthologous gene

GO biological process


response to abscisic acid


GO cellular component


nucleus


GO molecular function


unkown


Protein domain


PfamPF15044, Mitochondrial function, CLU-N-term
PfamPF12807, Translation initiation factor eIF3 subunit 135
PfamPF13424, Tetratricopeptide repeat
SMARTSM00028, TPR

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


38 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.811.87E-07
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-2.427.23E-04
GSE17464Laer, controlLaer, Flg22 2 h-2.322.83E-04
GSE17464Penta, controlPenta, Flg22 2 h-2.772.34E-05
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.519.79E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.633.68E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-4.285.45E-11
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.122.60E-06
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.661.30E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.671.03E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.876.73E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.325.53E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-3.291.43E-08
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-3.336.43E-14
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-2.273.82E-07
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.866.50E-11
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-2.024.26E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.923.02E-11
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h-1.595.14E-04
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-3.034.41E-12
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-1.566.29E-04
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h-1.623.53E-04
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h-1.838.96E-05
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-2.245.94E-07
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h-1.722.24E-04
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.703.31E-09
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-2.334.84E-07
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.631.72E-09
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-2.695.29E-09
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.383.85E-08
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-2.026.85E-06
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h-1.651.54E-06
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.849.84E-04
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h-1.545.37E-07
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.231.54E-09
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-1.621.72E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-2.206.21E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.782.11E-02






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