Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G28080

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010081: regulation of inflorescence meristem growth0.00E+00
2GO:0006285: base-excision repair, AP site formation1.13E-05
3GO:0009090: homoserine biosynthetic process1.13E-05
4GO:0010080: regulation of floral meristem growth1.13E-05
5GO:0010024: phytochromobilin biosynthetic process3.00E-05
6GO:0006296: nucleotide-excision repair, DNA incision, 5'-to lesion5.40E-05
7GO:0006788: heme oxidation5.40E-05
8GO:0010022: meristem determinacy5.40E-05
9GO:0009067: aspartate family amino acid biosynthetic process8.23E-05
10GO:1990019: protein storage vacuole organization8.23E-05
11GO:0016556: mRNA modification8.23E-05
12GO:0009088: threonine biosynthetic process2.25E-04
13GO:0009690: cytokinin metabolic process3.08E-04
14GO:0006098: pentose-phosphate shunt3.97E-04
15GO:0009086: methionine biosynthetic process4.44E-04
16GO:1900865: chloroplast RNA modification4.44E-04
17GO:0031425: chloroplast RNA processing4.44E-04
18GO:0009089: lysine biosynthetic process via diaminopimelate5.39E-04
19GO:0010582: floral meristem determinacy5.89E-04
20GO:0006094: gluconeogenesis6.40E-04
21GO:0006284: base-excision repair1.14E-03
22GO:0032502: developmental process1.59E-03
23GO:0001666: response to hypoxia1.95E-03
24GO:0006631: fatty acid metabolic process3.06E-03
25GO:0006096: glycolytic process4.43E-03
26GO:0009451: RNA modification7.46E-03
27GO:0015979: photosynthesis1.27E-02
28GO:0006397: mRNA processing1.57E-02
29GO:0006511: ubiquitin-dependent protein catabolic process2.85E-02
RankGO TermAdjusted P value
1GO:0000703: oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity1.13E-05
2GO:0004412: homoserine dehydrogenase activity3.00E-05
3GO:0003906: DNA-(apurinic or apyrimidinic site) lyase activity5.40E-05
4GO:0004300: enoyl-CoA hydratase activity8.23E-05
5GO:0004072: aspartate kinase activity8.23E-05
6GO:0004392: heme oxygenase (decyclizing) activity1.14E-04
7GO:0019104: DNA N-glycosylase activity1.14E-04
8GO:0004332: fructose-bisphosphate aldolase activity1.86E-04
9GO:0004519: endonuclease activity1.48E-03
10GO:0016597: amino acid binding1.87E-03
11GO:0050661: NADP binding2.97E-03
12GO:0051539: 4 iron, 4 sulfur cluster binding2.97E-03
13GO:0003674: molecular_function4.43E-03
14GO:0003723: RNA binding3.74E-02
15GO:0004842: ubiquitin-protein transferase activity4.78E-02
RankGO TermAdjusted P value
1GO:0042644: chloroplast nucleoid3.97E-04
2GO:0019005: SCF ubiquitin ligase complex2.32E-03
3GO:0012505: endomembrane system4.93E-03
4GO:0005874: microtubule1.13E-02
5GO:0043231: intracellular membrane-bounded organelle1.64E-02
6GO:0005575: cellular_component2.23E-02
7GO:0005739: mitochondrion4.72E-02
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Gene type



Gene DE type