gene detail

Gene description

TAIR ID: AT4G25830

Short description: Uncharacterised protein family (UPF0497)

Pathogen responsiveness: -0.04

General responsiveness: 0.87

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

extracellular region, integral component of membrane, plasma membrane

GO molecular function

iron-sulfur cluster binding

Protein domain

Pfam	PF04535, Domain of unknown function (DUF588)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G38250, AT3G20770

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

15 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.52	1.41E-02
GSE5616	Col, WT, water 24 h	Col, WT, P. infestans 24 h	-1.71	2.52E-06
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-1.74	4.00E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.79	3.93E-11
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.93	1.06E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-2.02	4.31E-03
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-2.03	1.17E-04
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.25	1.61E-12
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-2.28	3.92E-05
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.33	8.52E-13

Showing 1 to 10 of 15 entries