Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G25830

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905499: trichome papilla formation0.00E+00
2GO:0050732: negative regulation of peptidyl-tyrosine phosphorylation0.00E+00
3GO:1901918: negative regulation of exoribonuclease activity0.00E+00
4GO:0033231: carbohydrate export0.00E+00
5GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
6GO:0005996: monosaccharide metabolic process0.00E+00
7GO:0046471: phosphatidylglycerol metabolic process0.00E+00
8GO:0042823: pyridoxal phosphate biosynthetic process9.15E-06
9GO:0010600: regulation of auxin biosynthetic process1.71E-05
10GO:0010244: response to low fluence blue light stimulus by blue low-fluence system5.87E-05
11GO:0009704: de-etiolation1.02E-04
12GO:0010928: regulation of auxin mediated signaling pathway1.02E-04
13GO:0046900: tetrahydrofolylpolyglutamate metabolic process1.46E-04
14GO:0048640: negative regulation of developmental growth1.46E-04
15GO:0043007: maintenance of rDNA1.46E-04
16GO:0019510: S-adenosylhomocysteine catabolic process1.46E-04
17GO:1902334: fructose export from vacuole to cytoplasm1.46E-04
18GO:0015755: fructose transport1.46E-04
19GO:0051180: vitamin transport1.46E-04
20GO:0030974: thiamine pyrophosphate transport1.46E-04
21GO:0071277: cellular response to calcium ion1.46E-04
22GO:0046467: membrane lipid biosynthetic process1.46E-04
23GO:0006637: acyl-CoA metabolic process1.46E-04
24GO:0042761: very long-chain fatty acid biosynthetic process1.88E-04
25GO:0018298: protein-chromophore linkage2.33E-04
26GO:0008616: queuosine biosynthetic process3.33E-04
27GO:0042819: vitamin B6 biosynthetic process3.33E-04
28GO:0015893: drug transport3.33E-04
29GO:0033353: S-adenosylmethionine cycle3.33E-04
30GO:0010207: photosystem II assembly3.85E-04
31GO:0006636: unsaturated fatty acid biosynthetic process4.81E-04
32GO:0010025: wax biosynthetic process4.81E-04
33GO:0006081: cellular aldehyde metabolic process5.47E-04
34GO:0015714: phosphoenolpyruvate transport5.47E-04
35GO:0009768: photosynthesis, light harvesting in photosystem I5.87E-04
36GO:0031408: oxylipin biosynthetic process6.43E-04
37GO:0009585: red, far-red light phototransduction6.52E-04
38GO:0071484: cellular response to light intensity7.83E-04
39GO:0009902: chloroplast relocation1.04E-03
40GO:0010021: amylopectin biosynthetic process1.04E-03
41GO:0015976: carbon utilization1.04E-03
42GO:0015689: molybdate ion transport1.04E-03
43GO:0006183: GTP biosynthetic process1.04E-03
44GO:0045727: positive regulation of translation1.04E-03
45GO:0015713: phosphoglycerate transport1.04E-03
46GO:0009646: response to absence of light1.11E-03
47GO:0019252: starch biosynthetic process1.19E-03
48GO:0006869: lipid transport1.23E-03
49GO:0006665: sphingolipid metabolic process1.31E-03
50GO:0032259: methylation1.38E-03
51GO:0010190: cytochrome b6f complex assembly1.61E-03
52GO:0017148: negative regulation of translation1.93E-03
53GO:0010019: chloroplast-nucleus signaling pathway1.93E-03
54GO:0045926: negative regulation of growth1.93E-03
55GO:0007623: circadian rhythm2.00E-03
56GO:0015995: chlorophyll biosynthetic process2.13E-03
57GO:1900057: positive regulation of leaf senescence2.27E-03
58GO:0009645: response to low light intensity stimulus2.27E-03
59GO:0010161: red light signaling pathway2.27E-03
60GO:1900056: negative regulation of leaf senescence2.27E-03
61GO:0009769: photosynthesis, light harvesting in photosystem II2.27E-03
62GO:0050829: defense response to Gram-negative bacterium2.27E-03
63GO:0010218: response to far red light2.60E-03
64GO:0009231: riboflavin biosynthetic process2.63E-03
65GO:0005978: glycogen biosynthetic process2.63E-03
66GO:0009637: response to blue light2.98E-03
67GO:0010100: negative regulation of photomorphogenesis3.00E-03
68GO:0032544: plastid translation3.00E-03
69GO:0071482: cellular response to light stimulus3.00E-03
70GO:0009657: plastid organization3.00E-03
71GO:0034599: cellular response to oxidative stress3.11E-03
72GO:0090333: regulation of stomatal closure3.40E-03
73GO:0006754: ATP biosynthetic process3.40E-03
74GO:0006098: pentose-phosphate shunt3.40E-03
75GO:0010206: photosystem II repair3.40E-03
76GO:0034765: regulation of ion transmembrane transport3.40E-03
77GO:0009658: chloroplast organization3.47E-03
78GO:0010205: photoinhibition3.81E-03
79GO:0010380: regulation of chlorophyll biosynthetic process3.81E-03
80GO:0010114: response to red light3.83E-03
81GO:0006995: cellular response to nitrogen starvation4.23E-03
82GO:0000272: polysaccharide catabolic process4.67E-03
83GO:0009750: response to fructose4.67E-03
84GO:0018119: peptidyl-cysteine S-nitrosylation4.67E-03
85GO:0046856: phosphatidylinositol dephosphorylation4.67E-03
86GO:0043085: positive regulation of catalytic activity4.67E-03
87GO:0006810: transport5.20E-03
88GO:0015979: photosynthesis5.40E-03
89GO:0006094: gluconeogenesis5.60E-03
90GO:0045454: cell redox homeostasis5.73E-03
91GO:0006541: glutamine metabolic process6.09E-03
92GO:0009833: plant-type primary cell wall biogenesis7.10E-03
93GO:0019762: glucosinolate catabolic process7.10E-03
94GO:0016042: lipid catabolic process7.21E-03
95GO:0006396: RNA processing7.54E-03
96GO:0051017: actin filament bundle assembly7.63E-03
97GO:0009695: jasmonic acid biosynthetic process8.18E-03
98GO:0051302: regulation of cell division8.18E-03
99GO:0019953: sexual reproduction8.18E-03
100GO:0051260: protein homooligomerization8.73E-03
101GO:0009269: response to desiccation8.73E-03
102GO:0030433: ubiquitin-dependent ERAD pathway9.30E-03
103GO:0030245: cellulose catabolic process9.30E-03
104GO:0010017: red or far-red light signaling pathway9.30E-03
105GO:0006730: one-carbon metabolic process9.30E-03
106GO:0009693: ethylene biosynthetic process9.89E-03
107GO:0009306: protein secretion1.05E-02
108GO:0019722: calcium-mediated signaling1.05E-02
109GO:0010091: trichome branching1.05E-02
110GO:0070417: cellular response to cold1.11E-02
111GO:0042631: cellular response to water deprivation1.17E-02
112GO:0042335: cuticle development1.17E-02
113GO:0042391: regulation of membrane potential1.17E-02
114GO:0006662: glycerol ether metabolic process1.24E-02
115GO:0009741: response to brassinosteroid1.24E-02
116GO:0055114: oxidation-reduction process1.25E-02
117GO:0007059: chromosome segregation1.30E-02
118GO:0007264: small GTPase mediated signal transduction1.50E-02
119GO:0010583: response to cyclopentenone1.50E-02
120GO:0007267: cell-cell signaling1.72E-02
121GO:0071805: potassium ion transmembrane transport1.72E-02
122GO:0010411: xyloglucan metabolic process2.09E-02
123GO:0030244: cellulose biosynthetic process2.25E-02
124GO:0006499: N-terminal protein myristoylation2.41E-02
125GO:0080167: response to karrikin2.44E-02
126GO:0009910: negative regulation of flower development2.49E-02
127GO:0016051: carbohydrate biosynthetic process2.66E-02
128GO:0006839: mitochondrial transport2.92E-02
129GO:0042546: cell wall biogenesis3.28E-02
130GO:0000209: protein polyubiquitination3.28E-02
131GO:0009644: response to high light intensity3.37E-02
132GO:0006281: DNA repair3.60E-02
133GO:0071555: cell wall organization3.75E-02
134GO:0006364: rRNA processing3.94E-02
135GO:0006857: oligopeptide transport4.14E-02
136GO:0006417: regulation of translation4.24E-02
137GO:0006096: glycolytic process4.44E-02
138GO:0043086: negative regulation of catalytic activity4.44E-02
139GO:0042545: cell wall modification4.96E-02
RankGO TermAdjusted P value
1GO:0102345: 3-hydroxy-lignoceroyl-CoA dehydratase activity0.00E+00
2GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
3GO:0015284: fructose uniporter activity0.00E+00
4GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
5GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
6GO:0030794: (S)-coclaurine-N-methyltransferase activity0.00E+00
7GO:0102344: 3-hydroxy-behenoyl-CoA dehydratase activity0.00E+00
8GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
9GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
10GO:0018708: thiol S-methyltransferase activity1.05E-06
11GO:0004321: fatty-acyl-CoA synthase activity1.46E-04
12GO:0008242: omega peptidase activity1.46E-04
13GO:0035671: enone reductase activity1.46E-04
14GO:0046906: tetrapyrrole binding1.46E-04
15GO:0090422: thiamine pyrophosphate transporter activity1.46E-04
16GO:0004013: adenosylhomocysteinase activity1.46E-04
17GO:0015121: phosphoenolpyruvate:phosphate antiporter activity1.46E-04
18GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity1.46E-04
19GO:0010313: phytochrome binding1.46E-04
20GO:0005353: fructose transmembrane transporter activity3.33E-04
21GO:0034722: gamma-glutamyl-peptidase activity3.33E-04
22GO:0010297: heteropolysaccharide binding3.33E-04
23GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity3.33E-04
24GO:0003938: IMP dehydrogenase activity3.33E-04
25GO:0033201: alpha-1,4-glucan synthase activity3.33E-04
26GO:0008479: queuine tRNA-ribosyltransferase activity3.33E-04
27GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity3.33E-04
28GO:0031409: pigment binding4.81E-04
29GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity5.47E-04
30GO:0010277: chlorophyllide a oxygenase [overall] activity5.47E-04
31GO:0004373: glycogen (starch) synthase activity5.47E-04
32GO:0003913: DNA photolyase activity5.47E-04
33GO:0003935: GTP cyclohydrolase II activity5.47E-04
34GO:0008168: methyltransferase activity5.61E-04
35GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity7.83E-04
36GO:0048027: mRNA 5'-UTR binding7.83E-04
37GO:0004445: inositol-polyphosphate 5-phosphatase activity7.83E-04
38GO:0008878: glucose-1-phosphate adenylyltransferase activity1.04E-03
39GO:0015120: phosphoglycerate transmembrane transporter activity1.04E-03
40GO:0080032: methyl jasmonate esterase activity1.04E-03
41GO:0015098: molybdate ion transmembrane transporter activity1.04E-03
42GO:0009011: starch synthase activity1.04E-03
43GO:0048038: quinone binding1.27E-03
44GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen1.31E-03
45GO:0009922: fatty acid elongase activity1.31E-03
46GO:0080030: methyl indole-3-acetate esterase activity1.61E-03
47GO:0004332: fructose-bisphosphate aldolase activity1.61E-03
48GO:0047714: galactolipase activity1.61E-03
49GO:0004029: aldehyde dehydrogenase (NAD) activity1.61E-03
50GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity1.61E-03
51GO:0016168: chlorophyll binding1.92E-03
52GO:0005242: inward rectifier potassium channel activity1.93E-03
53GO:0009881: photoreceptor activity2.27E-03
54GO:0019899: enzyme binding2.27E-03
55GO:0042802: identical protein binding2.71E-03
56GO:0008970: phosphatidylcholine 1-acylhydrolase activity3.00E-03
57GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water3.00E-03
58GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism3.40E-03
59GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors3.40E-03
60GO:0016207: 4-coumarate-CoA ligase activity3.40E-03
61GO:0000989: transcription factor activity, transcription factor binding3.40E-03
62GO:0047617: acyl-CoA hydrolase activity3.81E-03
63GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity3.81E-03
64GO:0015020: glucuronosyltransferase activity4.23E-03
65GO:0019904: protein domain specific binding4.67E-03
66GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity5.13E-03
67GO:0052689: carboxylic ester hydrolase activity5.18E-03
68GO:0004089: carbonate dehydratase activity5.60E-03
69GO:0004565: beta-galactosidase activity5.60E-03
70GO:0051119: sugar transmembrane transporter activity6.59E-03
71GO:0016874: ligase activity6.89E-03
72GO:0004725: protein tyrosine phosphatase activity7.10E-03
73GO:0015035: protein disulfide oxidoreductase activity7.54E-03
74GO:0003954: NADH dehydrogenase activity7.63E-03
75GO:0016760: cellulose synthase (UDP-forming) activity9.89E-03
76GO:0008810: cellulase activity9.89E-03
77GO:0003727: single-stranded RNA binding1.05E-02
78GO:0047134: protein-disulfide reductase activity1.11E-02
79GO:0008289: lipid binding1.14E-02
80GO:0005249: voltage-gated potassium channel activity1.17E-02
81GO:0030551: cyclic nucleotide binding1.17E-02
82GO:0046910: pectinesterase inhibitor activity1.18E-02
83GO:0005215: transporter activity1.19E-02
84GO:0008080: N-acetyltransferase activity1.24E-02
85GO:0050662: coenzyme binding1.30E-02
86GO:0004791: thioredoxin-disulfide reductase activity1.30E-02
87GO:0010181: FMN binding1.30E-02
88GO:0016762: xyloglucan:xyloglucosyl transferase activity1.43E-02
89GO:0004518: nuclease activity1.50E-02
90GO:0016491: oxidoreductase activity1.55E-02
91GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.57E-02
92GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.61E-02
93GO:0016759: cellulose synthase activity1.64E-02
94GO:0016791: phosphatase activity1.64E-02
95GO:0008375: acetylglucosaminyltransferase activity2.01E-02
96GO:0016788: hydrolase activity, acting on ester bonds2.01E-02
97GO:0016798: hydrolase activity, acting on glycosyl bonds2.09E-02
98GO:0004806: triglyceride lipase activity2.09E-02
99GO:0004721: phosphoprotein phosphatase activity2.09E-02
100GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.17E-02
101GO:0030145: manganese ion binding2.49E-02
102GO:0004871: signal transducer activity3.06E-02
103GO:0051537: 2 iron, 2 sulfur cluster binding3.37E-02
104GO:0043621: protein self-association3.37E-02
105GO:0051287: NAD binding3.65E-02
106GO:0009055: electron carrier activity3.86E-02
107GO:0016298: lipase activity4.04E-02
108GO:0031625: ubiquitin protein ligase binding4.24E-02
109GO:0045330: aspartyl esterase activity4.24E-02
110GO:0030599: pectinesterase activity4.85E-02
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Gene type



Gene DE type