GO Enrichment Analysis of Co-expressed Genes with
AT4G25830
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 3 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 4 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 5 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 6 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 7 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 8 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 8.89E-10 |
| 9 | GO:0006098: pentose-phosphate shunt | 2.10E-05 |
| 10 | GO:0080093: regulation of photorespiration | 3.90E-05 |
| 11 | GO:0031998: regulation of fatty acid beta-oxidation | 3.90E-05 |
| 12 | GO:0009443: pyridoxal 5'-phosphate salvage | 3.90E-05 |
| 13 | GO:0006094: gluconeogenesis | 5.16E-05 |
| 14 | GO:0010143: cutin biosynthetic process | 5.95E-05 |
| 15 | GO:0051645: Golgi localization | 9.72E-05 |
| 16 | GO:0071457: cellular response to ozone | 9.72E-05 |
| 17 | GO:0060151: peroxisome localization | 9.72E-05 |
| 18 | GO:0055114: oxidation-reduction process | 1.60E-04 |
| 19 | GO:0051646: mitochondrion localization | 1.68E-04 |
| 20 | GO:0090391: granum assembly | 1.68E-04 |
| 21 | GO:0090436: leaf pavement cell development | 1.68E-04 |
| 22 | GO:0006810: transport | 2.20E-04 |
| 23 | GO:0071484: cellular response to light intensity | 2.48E-04 |
| 24 | GO:0071486: cellular response to high light intensity | 3.33E-04 |
| 25 | GO:0006546: glycine catabolic process | 3.33E-04 |
| 26 | GO:0010236: plastoquinone biosynthetic process | 4.25E-04 |
| 27 | GO:0006097: glyoxylate cycle | 4.25E-04 |
| 28 | GO:0071493: cellular response to UV-B | 4.25E-04 |
| 29 | GO:0042549: photosystem II stabilization | 5.22E-04 |
| 30 | GO:0009228: thiamine biosynthetic process | 5.22E-04 |
| 31 | GO:0010189: vitamin E biosynthetic process | 6.22E-04 |
| 32 | GO:0009854: oxidative photosynthetic carbon pathway | 6.22E-04 |
| 33 | GO:0071482: cellular response to light stimulus | 9.50E-04 |
| 34 | GO:0009657: plastid organization | 9.50E-04 |
| 35 | GO:0019430: removal of superoxide radicals | 9.50E-04 |
| 36 | GO:0006096: glycolytic process | 1.10E-03 |
| 37 | GO:0009773: photosynthetic electron transport in photosystem I | 1.44E-03 |
| 38 | GO:0009735: response to cytokinin | 1.49E-03 |
| 39 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.58E-03 |
| 40 | GO:0006108: malate metabolic process | 1.72E-03 |
| 41 | GO:0009767: photosynthetic electron transport chain | 1.72E-03 |
| 42 | GO:0030048: actin filament-based movement | 1.72E-03 |
| 43 | GO:0048467: gynoecium development | 1.86E-03 |
| 44 | GO:0010207: photosystem II assembly | 1.86E-03 |
| 45 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.16E-03 |
| 46 | GO:0007017: microtubule-based process | 2.48E-03 |
| 47 | GO:0061077: chaperone-mediated protein folding | 2.64E-03 |
| 48 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.80E-03 |
| 49 | GO:0042631: cellular response to water deprivation | 3.50E-03 |
| 50 | GO:0042335: cuticle development | 3.50E-03 |
| 51 | GO:0071472: cellular response to salt stress | 3.69E-03 |
| 52 | GO:0010154: fruit development | 3.69E-03 |
| 53 | GO:0015986: ATP synthesis coupled proton transport | 3.87E-03 |
| 54 | GO:0009791: post-embryonic development | 4.06E-03 |
| 55 | GO:0080167: response to karrikin | 4.23E-03 |
| 56 | GO:0010090: trichome morphogenesis | 4.65E-03 |
| 57 | GO:0009627: systemic acquired resistance | 5.91E-03 |
| 58 | GO:0042128: nitrate assimilation | 5.91E-03 |
| 59 | GO:0006974: cellular response to DNA damage stimulus | 5.91E-03 |
| 60 | GO:0032259: methylation | 5.97E-03 |
| 61 | GO:0016311: dephosphorylation | 6.35E-03 |
| 62 | GO:0016049: cell growth | 6.35E-03 |
| 63 | GO:0009817: defense response to fungus, incompatible interaction | 6.58E-03 |
| 64 | GO:0046686: response to cadmium ion | 7.13E-03 |
| 65 | GO:0009853: photorespiration | 7.75E-03 |
| 66 | GO:0006099: tricarboxylic acid cycle | 7.99E-03 |
| 67 | GO:0010114: response to red light | 9.25E-03 |
| 68 | GO:0000209: protein polyubiquitination | 9.51E-03 |
| 69 | GO:0006855: drug transmembrane transport | 1.03E-02 |
| 70 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.17E-02 |
| 71 | GO:0006417: regulation of translation | 1.23E-02 |
| 72 | GO:0006396: RNA processing | 1.49E-02 |
| 73 | GO:0009742: brassinosteroid mediated signaling pathway | 1.52E-02 |
| 74 | GO:0006413: translational initiation | 2.05E-02 |
| 75 | GO:0010150: leaf senescence | 2.16E-02 |
| 76 | GO:0042742: defense response to bacterium | 2.25E-02 |
| 77 | GO:0009409: response to cold | 3.04E-02 |
| 78 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.51E-02 |
| 79 | GO:0015979: photosynthesis | 3.77E-02 |
| 80 | GO:0016042: lipid catabolic process | 4.43E-02 |
| 81 | GO:0006397: mRNA processing | 4.66E-02 |
| 82 | GO:0009753: response to jasmonic acid | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 2 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 3 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 4 | GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity | 0.00E+00 |
| 5 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 6 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 7 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.64E-09 |
| 8 | GO:0004332: fructose-bisphosphate aldolase activity | 4.77E-06 |
| 9 | GO:0048038: quinone binding | 5.67E-06 |
| 10 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 3.90E-05 |
| 11 | GO:0005528: FK506 binding | 8.70E-05 |
| 12 | GO:0004047: aminomethyltransferase activity | 9.72E-05 |
| 13 | GO:0070402: NADPH binding | 1.68E-04 |
| 14 | GO:0050734: hydroxycinnamoyltransferase activity | 1.68E-04 |
| 15 | GO:0009011: starch synthase activity | 3.33E-04 |
| 16 | GO:0016615: malate dehydrogenase activity | 5.22E-04 |
| 17 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 5.22E-04 |
| 18 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 5.22E-04 |
| 19 | GO:0004784: superoxide dismutase activity | 5.22E-04 |
| 20 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 6.22E-04 |
| 21 | GO:0030060: L-malate dehydrogenase activity | 6.22E-04 |
| 22 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.17E-04 |
| 23 | GO:0004033: aldo-keto reductase (NADP) activity | 8.37E-04 |
| 24 | GO:0015078: hydrogen ion transmembrane transporter activity | 9.50E-04 |
| 25 | GO:0030234: enzyme regulator activity | 1.31E-03 |
| 26 | GO:0003774: motor activity | 1.86E-03 |
| 27 | GO:0008266: poly(U) RNA binding | 1.86E-03 |
| 28 | GO:0016740: transferase activity | 2.15E-03 |
| 29 | GO:0003727: single-stranded RNA binding | 3.15E-03 |
| 30 | GO:0008168: methyltransferase activity | 3.29E-03 |
| 31 | GO:0016853: isomerase activity | 3.87E-03 |
| 32 | GO:0016791: phosphatase activity | 4.85E-03 |
| 33 | GO:0005200: structural constituent of cytoskeleton | 5.05E-03 |
| 34 | GO:0008483: transaminase activity | 5.05E-03 |
| 35 | GO:0016491: oxidoreductase activity | 5.77E-03 |
| 36 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 6.35E-03 |
| 37 | GO:0003993: acid phosphatase activity | 7.99E-03 |
| 38 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 8.24E-03 |
| 39 | GO:0004185: serine-type carboxypeptidase activity | 9.25E-03 |
| 40 | GO:0051537: 2 iron, 2 sulfur cluster binding | 9.77E-03 |
| 41 | GO:0043621: protein self-association | 9.77E-03 |
| 42 | GO:0051287: NAD binding | 1.06E-02 |
| 43 | GO:0031625: ubiquitin protein ligase binding | 1.23E-02 |
| 44 | GO:0003779: actin binding | 1.43E-02 |
| 45 | GO:0016746: transferase activity, transferring acyl groups | 1.49E-02 |
| 46 | GO:0005509: calcium ion binding | 2.07E-02 |
| 47 | GO:0003743: translation initiation factor activity | 2.41E-02 |
| 48 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.56E-02 |
| 49 | GO:0042802: identical protein binding | 2.56E-02 |
| 50 | GO:0016788: hydrolase activity, acting on ester bonds | 2.98E-02 |
| 51 | GO:0043531: ADP binding | 3.14E-02 |
| 52 | GO:0061630: ubiquitin protein ligase activity | 3.56E-02 |
| 53 | GO:0052689: carboxylic ester hydrolase activity | 3.68E-02 |
| 54 | GO:0042803: protein homodimerization activity | 4.03E-02 |
| 55 | GO:0004722: protein serine/threonine phosphatase activity | 4.16E-02 |
| 56 | GO:0003924: GTPase activity | 4.53E-02 |
| 57 | GO:0016787: hydrolase activity | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.23E-19 |
| 3 | GO:0009579: thylakoid | 1.03E-10 |
| 4 | GO:0009941: chloroplast envelope | 2.79E-10 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 2.02E-09 |
| 6 | GO:0009534: chloroplast thylakoid | 9.07E-08 |
| 7 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.18E-07 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.42E-07 |
| 9 | GO:0009570: chloroplast stroma | 3.18E-07 |
| 10 | GO:0031977: thylakoid lumen | 3.25E-05 |
| 11 | GO:0048046: apoplast | 3.53E-05 |
| 12 | GO:0009344: nitrite reductase complex [NAD(P)H] | 3.90E-05 |
| 13 | GO:0030095: chloroplast photosystem II | 5.95E-05 |
| 14 | GO:0009654: photosystem II oxygen evolving complex | 9.72E-05 |
| 15 | GO:0010287: plastoglobule | 1.28E-04 |
| 16 | GO:0019898: extrinsic component of membrane | 2.16E-04 |
| 17 | GO:0010319: stromule | 3.00E-04 |
| 18 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 5.22E-04 |
| 19 | GO:0045298: tubulin complex | 1.07E-03 |
| 20 | GO:0016459: myosin complex | 1.31E-03 |
| 21 | GO:0005777: peroxisome | 1.99E-03 |
| 22 | GO:0042651: thylakoid membrane | 2.48E-03 |
| 23 | GO:0009523: photosystem II | 4.06E-03 |
| 24 | GO:0005874: microtubule | 4.09E-03 |
| 25 | GO:0031969: chloroplast membrane | 4.23E-03 |
| 26 | GO:0022626: cytosolic ribosome | 1.06E-02 |
| 27 | GO:0009706: chloroplast inner membrane | 1.46E-02 |
| 28 | GO:0005618: cell wall | 2.33E-02 |
| 29 | GO:0005615: extracellular space | 2.34E-02 |
| 30 | GO:0005773: vacuole | 3.35E-02 |
| 31 | GO:0016020: membrane | 4.53E-02 |