Gene: AT4G25500
     

Gene description


TAIR ID: AT4G25500

Short description: arginine/serine-rich splicing factor 35

Pathogen responsiveness: -1.31

General responsiveness: -0.74

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


RNA splicing, mRNA splicing, via spliceosome


GO cellular component


spliceosomal complex, nuclear speck, nucleus, nuclear dicing body


GO molecular function


protein binding, RNA binding


Protein domain


PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00360, RRM

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT1G51600, AT5G13790, AT4G18770, AT1G24260, AT2G20180

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.653.08E-13
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.332.05E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.914.17E-14
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.971.34E-14
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.642.80E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.513.19E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min-2.004.22E-02






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