Gene: AT4G25500

Gene description

TAIR ID: AT4G25500

Short description: arginine/serine-rich splicing factor 35

Pathogen responsiveness: -1.31

General responsiveness: -0.74


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process

RNA splicing, mRNA splicing, via spliceosome

GO cellular component

spliceosomal complex, nuclear speck, nucleus, nuclear dicing body

GO molecular function

protein binding, RNA binding

Protein domain

PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Metabolic pathway

Not involved in metabolic pathway

Transcriptional regulation

AT1G51600, AT5G13790, AT4G18770, AT1G24260, AT2G20180


Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition

7 conditions

SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.653.08E-13
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.332.05E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.914.17E-14
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.971.34E-14
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.642.80E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.513.19E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min-2.004.22E-02

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