gene detail

Gene description

TAIR ID: AT4G14690

Short description: Chlorophyll A-B binding family protein

Pathogen responsiveness: 0.04

General responsiveness: 1.29

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

photosynthesis, cellular response to high light intensity, cellular response to far red light, response to UV-B, cellular response to heat, regulation of chlorophyll biosynthetic process, cellular response to UV-A, photoprotection, cellular response to blue light, response to red light, transmembrane transport, cellular response to red light, positive regulation of seed germination, response to far red light

GO cellular component

chloroplast thylakoid membrane, chloroplast, photosystem I, integral component of membrane, photosystem II

GO molecular function

substrate-specific transmembrane transporter activity

Protein domain

Pfam	PF00504, Chlorophyll A-B binding protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G18770, AT1G24260, AT2G20180, AT2G43010, AT1G09530

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 23 (Top10%)

click to view PPI network

Coexpression network

GSE56094_WT_HRPA- view
GSE45212_MED14_PSTDC3000_AVRRPT2 view

Differentially expressed condition

17 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-2.02	5.36E-03
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-2.52	2.24E-04
GSE17464	Laer, control	Laer, PstDC3000 12 h	-2.41	4.86E-04
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-4.27	2.62E-09
GSE17464	Penta, control	Penta, PstDC3000 12 h	-4.01	1.48E-08
GSE17464	Penta, control	Penta, Flg22 2 h	-1.63	1.41E-02
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.71	3.42E-04
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	-1.82	2.84E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-2.36	2.95E-09
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	-1.53	1.74E-05
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	-3.09	2.50E-11
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	-3.38	2.69E-12
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	-2.42	1.92E-08
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.67	4.62E-05
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-1.62	4.20E-02
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-1.84	3.67E-02
GSE6556	Col, WT, control	Col, WT, PstDC3000 AvrRpt2 48 h	-1.81	8.39E-04