Gene: AT1G09530

Gene description

TAIR ID: AT1G09530

Short description: phytochrome interacting factor 3

Pathogen responsiveness: -1.12

General responsiveness: 0.12


Rice: No orthologous gene


Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, red, far-red light phototransduction, red or far-red light signaling pathway, de-etiolation, response to red or far red light, gibberellic acid mediated signaling pathway, positive regulation of anthocyanin metabolic process, signal transduction, transcription

GO cellular component


GO molecular function

identical protein binding, protein binding, transcription factor activity, sequence-specific DNA binding

Protein domain

PfamPF00010, Helix-loop-helix DNA-binding domain

Metabolic pathway

Not involved in metabolic pathway

Protein-protein interaction network

The number of partners (degree) is: 32 (Top5%)

click to view PPI network

Differentially expressed condition

5 conditions

SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, Flg22 2 h-1.752.48E-05
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.617.74E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.711.57E-09
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.791.09E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.852.40E-05

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