gene detail

Gene description

TAIR ID: AT3G49260

Short description: IQ-domain 21

Pathogen responsiveness: 0.24

General responsiveness: 1.83

Orthologous

Rice:

OS02G0299200

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

nucleus

GO molecular function

unkown

Protein domain

Pfam	PF00612, IQ calmodulin-binding motif
Pfam	PF13178, Protein of unknown function (DUF4005)
SMART	SM00015, IQ

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

24 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-1.55	1.88E-06
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 5 d	-1.53	1.02E-04
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.96	3.50E-06
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-2.07	9.07E-07
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.80	5.02E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.87	2.21E-09
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.19	5.54E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-2.39	2.03E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-2.10	6.50E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-2.32	2.85E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	-1.58	2.42E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.76	1.28E-15
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.75	2.08E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.15	1.30E-16
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.91	4.88E-16
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.13	1.20E-16
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.63	2.30E-09
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.64	2.31E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-3.14	5.50E-14
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-2.64	1.32E-04
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.36	1.74E-05
GSE5686	Col, WT, control 5 d	Col, WT, G.orontii 5 d	-1.61	1.58E-06
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-3.13	1.05E-03
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	-2.51	3.93E-05