Gene: AT3G46780
     

Gene description


TAIR ID: AT3G46780

Short description: plastid transcriptionally active 16

Pathogen responsiveness: 0.65

General responsiveness: 3.78

Orthologous


Rice:

OS05G0291700  

Maize:

GRMZM2G449496  

Wheat: No orthologous gene

GO biological process


circadian rhythm


GO cellular component


chloroplast thylakoid, chloroplast thylakoid membrane, chloroplast envelope, stromal side of plastid thylakoid membrane, plastid chromosome, chloroplast nucleoid, membrane, nucleoid, chloroplast


GO molecular function


protein binding


Protein domain


PfamPF13460, NAD(P)H-binding

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 8

click to view PPI network

Differentially expressed condition


28 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.604.23E-03
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.732.82E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-4.612.03E-09
GSE21920Col, WT, mockCol, WT, Pto HopZ1a C216aA 6 h-1.731.33E-03
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.837.40E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.079.92E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.841.49E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.741.22E-06
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.564.85E-09
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-1.531.74E-03
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-3.364.18E-07
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-1.857.74E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.421.39E-06
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-3.043.05E-11
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-2.071.03E-05
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-3.302.92E-12
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-2.521.06E-07
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-3.142.07E-11
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h-1.704.99E-04
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-3.168.90E-12
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-1.772.77E-04
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.561.01E-03
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.711.50E-04
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-2.202.69E-06
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.696.81E-09
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-2.751.76E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.099.01E-04
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.781.06E-05






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