Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G46780

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015979: photosynthesis1.10E-10
2GO:0009768: photosynthesis, light harvesting in photosystem I1.36E-06
3GO:0071588: hydrogen peroxide mediated signaling pathway2.32E-06
4GO:0000302: response to reactive oxygen species3.96E-06
5GO:0018298: protein-chromophore linkage8.99E-06
6GO:0010218: response to far red light1.02E-05
7GO:0009637: response to blue light1.21E-05
8GO:0034599: cellular response to oxidative stress1.29E-05
9GO:0010114: response to red light1.67E-05
10GO:0042744: hydrogen peroxide catabolic process5.57E-05
11GO:0010019: chloroplast-nucleus signaling pathway5.85E-05
12GO:0010196: nonphotochemical quenching7.04E-05
13GO:0010207: photosystem II assembly2.03E-04
14GO:0015995: chlorophyll biosynthetic process6.55E-04
15GO:0009817: defense response to fungus, incompatible interaction6.99E-04
16GO:0009631: cold acclimation7.68E-04
17GO:0055114: oxidation-reduction process3.54E-03
18GO:0008152: metabolic process4.52E-03
19GO:0009735: response to cytokinin5.89E-03
20GO:0042742: defense response to bacterium1.03E-02
RankGO TermAdjusted P value
1GO:0004130: cytochrome-c peroxidase activity4.70E-08
2GO:0031409: pigment binding1.03E-06
3GO:0016168: chlorophyll binding6.88E-06
4GO:0004324: ferredoxin-NADP+ reductase activity1.23E-05
5GO:0016851: magnesium chelatase activity1.94E-05
6GO:0003959: NADPH dehydrogenase activity3.71E-05
7GO:0016688: L-ascorbate peroxidase activity4.74E-05
8GO:0008266: poly(U) RNA binding2.03E-04
9GO:0005528: FK506 binding2.54E-04
10GO:0046872: metal ion binding6.73E-04
11GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.06E-03
12GO:0020037: heme binding1.17E-03
13GO:0016787: hydrolase activity1.56E-03
14GO:0004601: peroxidase activity2.80E-03
15GO:0016491: oxidoreductase activity1.25E-02
16GO:0005515: protein binding1.85E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast0.00E+00
2GO:0009579: thylakoid3.93E-14
3GO:0009534: chloroplast thylakoid4.07E-14
4GO:0009535: chloroplast thylakoid membrane5.33E-12
5GO:0009543: chloroplast thylakoid lumen4.01E-07
6GO:0030076: light-harvesting complex8.92E-07
7GO:0009783: photosystem II antenna complex2.32E-06
8GO:0009522: photosystem I3.30E-06
9GO:0010007: magnesium chelatase complex1.23E-05
10GO:0031977: thylakoid lumen1.51E-05
11GO:0009941: chloroplast envelope1.88E-05
12GO:0009517: PSII associated light-harvesting complex II2.77E-05
13GO:0009570: chloroplast stroma3.61E-05
14GO:0010287: plastoglobule4.50E-05
15GO:0009533: chloroplast stromal thylakoid7.04E-05
16GO:0009538: photosystem I reaction center8.28E-05
17GO:0042651: thylakoid membrane2.72E-04
18GO:0009523: photosystem II4.43E-04
19GO:0009706: chloroplast inner membrane1.46E-03
20GO:0048046: apoplast2.57E-02
21GO:0016021: integral component of membrane3.46E-02
22GO:0016020: membrane3.86E-02
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Gene type



Gene DE type