GO Enrichment Analysis of Co-expressed Genes with
AT3G46780
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 3 | GO:0015979: photosynthesis | 2.34E-09 |
| 4 | GO:0035304: regulation of protein dephosphorylation | 9.86E-08 |
| 5 | GO:0010207: photosystem II assembly | 6.10E-07 |
| 6 | GO:0042549: photosystem II stabilization | 4.77E-06 |
| 7 | GO:0015995: chlorophyll biosynthetic process | 1.41E-05 |
| 8 | GO:0009735: response to cytokinin | 1.70E-05 |
| 9 | GO:0010206: photosystem II repair | 2.10E-05 |
| 10 | GO:0010205: photoinhibition | 2.59E-05 |
| 11 | GO:0019684: photosynthesis, light reaction | 3.76E-05 |
| 12 | GO:0009773: photosynthetic electron transport in photosystem I | 3.76E-05 |
| 13 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.43E-05 |
| 14 | GO:0010541: acropetal auxin transport | 9.72E-05 |
| 15 | GO:0006568: tryptophan metabolic process | 9.72E-05 |
| 16 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.32E-04 |
| 17 | GO:0048443: stamen development | 1.44E-04 |
| 18 | GO:0045493: xylan catabolic process | 1.68E-04 |
| 19 | GO:0010160: formation of animal organ boundary | 1.68E-04 |
| 20 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.48E-04 |
| 21 | GO:0051513: regulation of monopolar cell growth | 2.48E-04 |
| 22 | GO:0080170: hydrogen peroxide transmembrane transport | 2.48E-04 |
| 23 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 2.48E-04 |
| 24 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 2.48E-04 |
| 25 | GO:0009828: plant-type cell wall loosening | 2.82E-04 |
| 26 | GO:0030104: water homeostasis | 3.33E-04 |
| 27 | GO:0009913: epidermal cell differentiation | 5.22E-04 |
| 28 | GO:0006655: phosphatidylglycerol biosynthetic process | 5.22E-04 |
| 29 | GO:0060918: auxin transport | 5.22E-04 |
| 30 | GO:0009772: photosynthetic electron transport in photosystem II | 7.28E-04 |
| 31 | GO:0009664: plant-type cell wall organization | 8.75E-04 |
| 32 | GO:0048589: developmental growth | 1.07E-03 |
| 33 | GO:0009245: lipid A biosynthetic process | 1.07E-03 |
| 34 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.19E-03 |
| 35 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.31E-03 |
| 36 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.44E-03 |
| 37 | GO:0010152: pollen maturation | 1.58E-03 |
| 38 | GO:0008361: regulation of cell size | 1.58E-03 |
| 39 | GO:0010540: basipetal auxin transport | 1.86E-03 |
| 40 | GO:0010143: cutin biosynthetic process | 1.86E-03 |
| 41 | GO:0051017: actin filament bundle assembly | 2.32E-03 |
| 42 | GO:0048511: rhythmic process | 2.64E-03 |
| 43 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 2.80E-03 |
| 44 | GO:0071369: cellular response to ethylene stimulus | 2.97E-03 |
| 45 | GO:0009826: unidimensional cell growth | 3.29E-03 |
| 46 | GO:0080022: primary root development | 3.50E-03 |
| 47 | GO:0034220: ion transmembrane transport | 3.50E-03 |
| 48 | GO:0042335: cuticle development | 3.50E-03 |
| 49 | GO:0009958: positive gravitropism | 3.69E-03 |
| 50 | GO:0015986: ATP synthesis coupled proton transport | 3.87E-03 |
| 51 | GO:0042752: regulation of circadian rhythm | 3.87E-03 |
| 52 | GO:0048825: cotyledon development | 4.06E-03 |
| 53 | GO:0042742: defense response to bacterium | 4.07E-03 |
| 54 | GO:0000302: response to reactive oxygen species | 4.26E-03 |
| 55 | GO:0030163: protein catabolic process | 4.65E-03 |
| 56 | GO:0009639: response to red or far red light | 4.85E-03 |
| 57 | GO:0009627: systemic acquired resistance | 5.91E-03 |
| 58 | GO:0032259: methylation | 5.97E-03 |
| 59 | GO:0010411: xyloglucan metabolic process | 6.13E-03 |
| 60 | GO:0010218: response to far red light | 7.04E-03 |
| 61 | GO:0048527: lateral root development | 7.27E-03 |
| 62 | GO:0009637: response to blue light | 7.75E-03 |
| 63 | GO:0034599: cellular response to oxidative stress | 7.99E-03 |
| 64 | GO:0030001: metal ion transport | 8.48E-03 |
| 65 | GO:0009926: auxin polar transport | 9.25E-03 |
| 66 | GO:0009640: photomorphogenesis | 9.25E-03 |
| 67 | GO:0031347: regulation of defense response | 1.06E-02 |
| 68 | GO:0009793: embryo development ending in seed dormancy | 1.18E-02 |
| 69 | GO:0009845: seed germination | 1.81E-02 |
| 70 | GO:0042744: hydrogen peroxide catabolic process | 1.88E-02 |
| 71 | GO:0006633: fatty acid biosynthetic process | 2.02E-02 |
| 72 | GO:0009733: response to auxin | 2.52E-02 |
| 73 | GO:0009658: chloroplast organization | 2.94E-02 |
| 74 | GO:0048364: root development | 4.66E-02 |
| 75 | GO:0009737: response to abscisic acid | 4.76E-02 |
| 76 | GO:0008152: metabolic process | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 2 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 3 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 4 | GO:0010242: oxygen evolving activity | 0.00E+00 |
| 5 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 3.90E-05 |
| 6 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 3.90E-05 |
| 7 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 3.90E-05 |
| 8 | GO:0008266: poly(U) RNA binding | 5.95E-05 |
| 9 | GO:0005528: FK506 binding | 8.70E-05 |
| 10 | GO:0004751: ribose-5-phosphate isomerase activity | 1.68E-04 |
| 11 | GO:0016851: magnesium chelatase activity | 2.48E-04 |
| 12 | GO:0009044: xylan 1,4-beta-xylosidase activity | 3.33E-04 |
| 13 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 3.33E-04 |
| 14 | GO:0046556: alpha-L-arabinofuranosidase activity | 3.33E-04 |
| 15 | GO:0010011: auxin binding | 3.33E-04 |
| 16 | GO:0031177: phosphopantetheine binding | 5.22E-04 |
| 17 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 5.22E-04 |
| 18 | GO:0004130: cytochrome-c peroxidase activity | 5.22E-04 |
| 19 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 5.22E-04 |
| 20 | GO:0000035: acyl binding | 6.22E-04 |
| 21 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.17E-04 |
| 22 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 8.37E-04 |
| 23 | GO:0016746: transferase activity, transferring acyl groups | 1.35E-03 |
| 24 | GO:0031072: heat shock protein binding | 1.72E-03 |
| 25 | GO:0010329: auxin efflux transmembrane transporter activity | 1.72E-03 |
| 26 | GO:0003714: transcription corepressor activity | 2.32E-03 |
| 27 | GO:0003756: protein disulfide isomerase activity | 3.15E-03 |
| 28 | GO:0005509: calcium ion binding | 3.67E-03 |
| 29 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 3.69E-03 |
| 30 | GO:0051015: actin filament binding | 4.65E-03 |
| 31 | GO:0016791: phosphatase activity | 4.85E-03 |
| 32 | GO:0008483: transaminase activity | 5.05E-03 |
| 33 | GO:0015250: water channel activity | 5.47E-03 |
| 34 | GO:0016168: chlorophyll binding | 5.69E-03 |
| 35 | GO:0008236: serine-type peptidase activity | 6.35E-03 |
| 36 | GO:0005515: protein binding | 6.37E-03 |
| 37 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 8.24E-03 |
| 38 | GO:0016787: hydrolase activity | 1.07E-02 |
| 39 | GO:0051082: unfolded protein binding | 1.46E-02 |
| 40 | GO:0019843: rRNA binding | 1.72E-02 |
| 41 | GO:0030170: pyridoxal phosphate binding | 1.85E-02 |
| 42 | GO:0004252: serine-type endopeptidase activity | 1.85E-02 |
| 43 | GO:0008017: microtubule binding | 2.23E-02 |
| 44 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.56E-02 |
| 45 | GO:0008168: methyltransferase activity | 2.86E-02 |
| 46 | GO:0004601: peroxidase activity | 2.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043224: nuclear SCF ubiquitin ligase complex | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 9.47E-21 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.60E-16 |
| 4 | GO:0009507: chloroplast | 1.05E-15 |
| 5 | GO:0009579: thylakoid | 1.55E-15 |
| 6 | GO:0009570: chloroplast stroma | 1.63E-14 |
| 7 | GO:0009941: chloroplast envelope | 3.28E-14 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 5.05E-13 |
| 9 | GO:0031977: thylakoid lumen | 1.01E-08 |
| 10 | GO:0010287: plastoglobule | 1.23E-07 |
| 11 | GO:0030095: chloroplast photosystem II | 6.10E-07 |
| 12 | GO:0009654: photosystem II oxygen evolving complex | 1.35E-06 |
| 13 | GO:0019898: extrinsic component of membrane | 5.03E-06 |
| 14 | GO:0009538: photosystem I reaction center | 1.29E-05 |
| 15 | GO:0043674: columella | 3.90E-05 |
| 16 | GO:0030093: chloroplast photosystem I | 9.72E-05 |
| 17 | GO:0010007: magnesium chelatase complex | 1.68E-04 |
| 18 | GO:0055035: plastid thylakoid membrane | 4.25E-04 |
| 19 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 5.22E-04 |
| 20 | GO:0042807: central vacuole | 7.28E-04 |
| 21 | GO:0009533: chloroplast stromal thylakoid | 7.28E-04 |
| 22 | GO:0055028: cortical microtubule | 1.31E-03 |
| 23 | GO:0009508: plastid chromosome | 1.72E-03 |
| 24 | GO:0015629: actin cytoskeleton | 2.97E-03 |
| 25 | GO:0009522: photosystem I | 3.87E-03 |
| 26 | GO:0009523: photosystem II | 4.06E-03 |
| 27 | GO:0031969: chloroplast membrane | 4.23E-03 |
| 28 | GO:0010319: stromule | 5.05E-03 |
| 29 | GO:0009295: nucleoid | 5.05E-03 |
| 30 | GO:0005618: cell wall | 5.66E-03 |
| 31 | GO:0016020: membrane | 6.74E-03 |
| 32 | GO:0005856: cytoskeleton | 1.00E-02 |
| 33 | GO:0009706: chloroplast inner membrane | 1.46E-02 |
| 34 | GO:0009705: plant-type vacuole membrane | 2.16E-02 |
| 35 | GO:0009505: plant-type cell wall | 2.82E-02 |
| 36 | GO:0005874: microtubule | 3.35E-02 |