co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G42790

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010055: atrichoblast differentiation	0.00E+00
2	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
3	GO:0010401: pectic galactan metabolic process	0.00E+00
4	GO:0055074: calcium ion homeostasis	2.91E-06
5	GO:0015937: coenzyme A biosynthetic process	6.07E-05
6	GO:0016337: single organismal cell-cell adhesion	1.23E-04
7	GO:0009623: response to parasitic fungus	1.23E-04
8	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.23E-04
9	GO:0042964: thioredoxin reduction	1.23E-04
10	GO:0032107: regulation of response to nutrient levels	1.23E-04
11	GO:0090332: stomatal closure	1.48E-04
12	GO:0006024: glycosaminoglycan biosynthetic process	2.86E-04
13	GO:0048569: post-embryonic animal organ development	2.86E-04
14	GO:0052541: plant-type cell wall cellulose metabolic process	2.86E-04
15	GO:0008535: respiratory chain complex IV assembly	2.86E-04
16	GO:0019725: cellular homeostasis	2.86E-04
17	GO:0051252: regulation of RNA metabolic process	2.86E-04
18	GO:0015012: heparan sulfate proteoglycan biosynthetic process	2.86E-04
19	GO:0080183: response to photooxidative stress	2.86E-04
20	GO:0006788: heme oxidation	4.72E-04
21	GO:0071367: cellular response to brassinosteroid stimulus	4.72E-04
22	GO:0045836: positive regulation of meiotic nuclear division	4.72E-04
23	GO:0010186: positive regulation of cellular defense response	4.72E-04
24	GO:0009814: defense response, incompatible interaction	5.65E-04
25	GO:0071369: cellular response to ethylene stimulus	6.14E-04
26	GO:0072334: UDP-galactose transmembrane transport	6.76E-04
27	GO:0010104: regulation of ethylene-activated signaling pathway	6.76E-04
28	GO:0000187: activation of MAPK activity	6.76E-04
29	GO:0060548: negative regulation of cell death	8.97E-04
30	GO:0033320: UDP-D-xylose biosynthetic process	8.97E-04
31	GO:0006536: glutamate metabolic process	8.97E-04
32	GO:0046686: response to cadmium ion	1.01E-03
33	GO:0009058: biosynthetic process	1.07E-03
34	GO:0006665: sphingolipid metabolic process	1.13E-03
35	GO:0045927: positive regulation of growth	1.13E-03
36	GO:0006656: phosphatidylcholine biosynthetic process	1.13E-03
37	GO:0046283: anthocyanin-containing compound metabolic process	1.13E-03
38	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.13E-03
39	GO:0042732: D-xylose metabolic process	1.39E-03
40	GO:0042176: regulation of protein catabolic process	1.39E-03
41	GO:0060918: auxin transport	1.39E-03
42	GO:0006139: nucleobase-containing compound metabolic process	1.39E-03
43	GO:0009610: response to symbiotic fungus	1.95E-03
44	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	1.95E-03
45	GO:0009407: toxin catabolic process	2.07E-03
46	GO:0006102: isocitrate metabolic process	2.26E-03
47	GO:2000070: regulation of response to water deprivation	2.26E-03
48	GO:0006099: tricarboxylic acid cycle	2.49E-03
49	GO:0009657: plastid organization	2.58E-03
50	GO:0019430: removal of superoxide radicals	2.58E-03
51	GO:0001558: regulation of cell growth	2.58E-03
52	GO:0010204: defense response signaling pathway, resistance gene-independent	2.58E-03
53	GO:0015780: nucleotide-sugar transport	2.91E-03
54	GO:0009846: pollen germination	3.83E-03
55	GO:0055046: microgametogenesis	4.79E-03
56	GO:0009266: response to temperature stimulus	5.20E-03
57	GO:0006541: glutamine metabolic process	5.20E-03
58	GO:0009225: nucleotide-sugar metabolic process	5.63E-03
59	GO:0070588: calcium ion transmembrane transport	5.63E-03
60	GO:0051302: regulation of cell division	6.98E-03
61	GO:0051321: meiotic cell cycle	7.45E-03
62	GO:0016998: cell wall macromolecule catabolic process	7.45E-03
63	GO:0071456: cellular response to hypoxia	7.93E-03
64	GO:0010227: floral organ abscission	8.43E-03
65	GO:0006468: protein phosphorylation	8.43E-03
66	GO:0071215: cellular response to abscisic acid stimulus	8.43E-03
67	GO:0016117: carotenoid biosynthetic process	9.45E-03
68	GO:0034220: ion transmembrane transport	9.99E-03
69	GO:0010051: xylem and phloem pattern formation	9.99E-03
70	GO:0010087: phloem or xylem histogenesis	9.99E-03
71	GO:0048544: recognition of pollen	1.11E-02
72	GO:0007166: cell surface receptor signaling pathway	1.15E-02
73	GO:0030163: protein catabolic process	1.34E-02
74	GO:0006511: ubiquitin-dependent protein catabolic process	1.71E-02
75	GO:0016049: cell growth	1.85E-02
76	GO:0008219: cell death	1.91E-02
77	GO:0010043: response to zinc ion	2.12E-02
78	GO:0009631: cold acclimation	2.12E-02
79	GO:0048527: lateral root development	2.12E-02
80	GO:0045454: cell redox homeostasis	2.33E-02
81	GO:0042542: response to hydrogen peroxide	2.63E-02
82	GO:0016310: phosphorylation	2.78E-02
83	GO:0042742: defense response to bacterium	2.82E-02
84	GO:0009644: response to high light intensity	2.87E-02
85	GO:0008643: carbohydrate transport	2.87E-02
86	GO:0009636: response to toxic substance	2.95E-02
87	GO:0031347: regulation of defense response	3.11E-02
88	GO:0000165: MAPK cascade	3.11E-02
89	GO:0042538: hyperosmotic salinity response	3.19E-02
90	GO:0006486: protein glycosylation	3.35E-02
91	GO:0051603: proteolysis involved in cellular protein catabolic process	3.44E-02
92	GO:0048316: seed development	3.86E-02
93	GO:0009626: plant-type hypersensitive response	3.95E-02
94	GO:0009409: response to cold	4.10E-02
95	GO:0009651: response to salt stress	4.38E-02
96	GO:0006396: RNA processing	4.40E-02
97	GO:0009738: abscisic acid-activated signaling pathway	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0018580: nitronate monooxygenase activity	0.00E+00
2	GO:0019205: nucleobase-containing compound kinase activity	0.00E+00
3	GO:0004140: dephospho-CoA kinase activity	0.00E+00
4	GO:0051670: inulinase activity	0.00E+00
5	GO:2001227: quercitrin binding	1.23E-04
6	GO:0004105: choline-phosphate cytidylyltransferase activity	1.23E-04
7	GO:0051669: fructan beta-fructosidase activity	1.23E-04
8	GO:0048037: cofactor binding	1.23E-04
9	GO:0004633: phosphopantothenoylcysteine decarboxylase activity	1.23E-04
10	GO:0031219: levanase activity	1.23E-04
11	GO:2001147: camalexin binding	1.23E-04
12	GO:0008805: carbon-monoxide oxygenase activity	2.86E-04
13	GO:0004775: succinate-CoA ligase (ADP-forming) activity	2.86E-04
14	GO:0008428: ribonuclease inhibitor activity	2.86E-04
15	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	2.86E-04
16	GO:0004776: succinate-CoA ligase (GDP-forming) activity	2.86E-04
17	GO:0004566: beta-glucuronidase activity	2.86E-04
18	GO:0004867: serine-type endopeptidase inhibitor activity	3.45E-04
19	GO:0004351: glutamate decarboxylase activity	6.76E-04
20	GO:0004449: isocitrate dehydrogenase (NAD+) activity	6.76E-04
21	GO:0004392: heme oxygenase (decyclizing) activity	8.97E-04
22	GO:0009916: alternative oxidase activity	8.97E-04
23	GO:0005459: UDP-galactose transmembrane transporter activity	1.13E-03
24	GO:0008948: oxaloacetate decarboxylase activity	1.13E-03
25	GO:0048040: UDP-glucuronate decarboxylase activity	1.39E-03
26	GO:0051020: GTPase binding	1.66E-03
27	GO:0070403: NAD+ binding	1.66E-03
28	GO:0005338: nucleotide-sugar transmembrane transporter activity	1.95E-03
29	GO:0043295: glutathione binding	1.95E-03
30	GO:0005544: calcium-dependent phospholipid binding	2.26E-03
31	GO:0004525: ribonuclease III activity	2.26E-03
32	GO:0004708: MAP kinase kinase activity	2.26E-03
33	GO:0016301: kinase activity	2.91E-03
34	GO:0004364: glutathione transferase activity	2.94E-03
35	GO:0005524: ATP binding	3.26E-03
36	GO:0016740: transferase activity	3.36E-03
37	GO:0030234: enzyme regulator activity	3.62E-03
38	GO:0008327: methyl-CpG binding	4.00E-03
39	GO:0008559: xenobiotic-transporting ATPase activity	4.00E-03
40	GO:0046872: metal ion binding	4.69E-03
41	GO:0005388: calcium-transporting ATPase activity	4.79E-03
42	GO:0004565: beta-galactosidase activity	4.79E-03
43	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.79E-03
44	GO:0004175: endopeptidase activity	5.20E-03
45	GO:0004190: aspartic-type endopeptidase activity	5.63E-03
46	GO:0051082: unfolded protein binding	5.83E-03
47	GO:0001046: core promoter sequence-specific DNA binding	6.51E-03
48	GO:0035251: UDP-glucosyltransferase activity	7.45E-03
49	GO:0004298: threonine-type endopeptidase activity	7.45E-03
50	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	9.39E-03
51	GO:0004674: protein serine/threonine kinase activity	9.67E-03
52	GO:0001085: RNA polymerase II transcription factor binding	1.05E-02
53	GO:0004791: thioredoxin-disulfide reductase activity	1.11E-02
54	GO:0010181: FMN binding	1.11E-02
55	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.46E-02
56	GO:0000287: magnesium ion binding	1.54E-02
57	GO:0015250: water channel activity	1.58E-02
58	GO:0051213: dioxygenase activity	1.58E-02
59	GO:0030246: carbohydrate binding	1.69E-02
60	GO:0004683: calmodulin-dependent protein kinase activity	1.78E-02
61	GO:0005516: calmodulin binding	1.95E-02
62	GO:0005096: GTPase activator activity	1.98E-02
63	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.12E-02
64	GO:0051537: 2 iron, 2 sulfur cluster binding	2.87E-02
65	GO:0005198: structural molecule activity	2.95E-02
66	GO:0009055: electron carrier activity	3.08E-02
67	GO:0051287: NAD binding	3.11E-02
68	GO:0031625: ubiquitin protein ligase binding	3.60E-02
69	GO:0022857: transmembrane transporter activity	4.13E-02
70	GO:0015035: protein disulfide oxidoreductase activity	4.40E-02