co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G18710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000372: Group I intron splicing	0.00E+00
2	GO:0044154: histone H3-K14 acetylation	0.00E+00
3	GO:0043972: histone H3-K23 acetylation	0.00E+00
4	GO:0009793: embryo development ending in seed dormancy	2.44E-05
5	GO:0000373: Group II intron splicing	6.45E-05
6	GO:0043489: RNA stabilization	8.09E-05
7	GO:0048657: anther wall tapetum cell differentiation	8.09E-05
8	GO:0051171: regulation of nitrogen compound metabolic process	8.09E-05
9	GO:0043971: histone H3-K18 acetylation	8.09E-05
10	GO:0006436: tryptophanyl-tRNA aminoacylation	8.09E-05
11	GO:0000066: mitochondrial ornithine transport	8.09E-05
12	GO:0006435: threonyl-tRNA aminoacylation	1.93E-04
13	GO:0006696: ergosterol biosynthetic process	3.24E-04
14	GO:0045493: xylan catabolic process	3.24E-04
15	GO:0010255: glucose mediated signaling pathway	4.66E-04
16	GO:0051781: positive regulation of cell division	6.21E-04
17	GO:0006508: proteolysis	1.21E-03
18	GO:0048564: photosystem I assembly	1.54E-03
19	GO:0006839: mitochondrial transport	1.55E-03
20	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.73E-03
21	GO:0022900: electron transport chain	1.76E-03
22	GO:0044030: regulation of DNA methylation	1.76E-03
23	GO:0010380: regulation of chlorophyll biosynthetic process	2.22E-03
24	GO:0006259: DNA metabolic process	2.46E-03
25	GO:0006535: cysteine biosynthetic process from serine	2.46E-03
26	GO:0006265: DNA topological change	2.71E-03
27	GO:0006397: mRNA processing	2.85E-03
28	GO:0045037: protein import into chloroplast stroma	2.97E-03
29	GO:0010207: photosystem II assembly	3.52E-03
30	GO:0080188: RNA-directed DNA methylation	3.81E-03
31	GO:0019344: cysteine biosynthetic process	4.40E-03
32	GO:0006289: nucleotide-excision repair	4.40E-03
33	GO:0010187: negative regulation of seed germination	4.40E-03
34	GO:0006418: tRNA aminoacylation for protein translation	4.70E-03
35	GO:0010073: meristem maintenance	4.70E-03
36	GO:0015992: proton transport	5.02E-03
37	GO:0080092: regulation of pollen tube growth	5.34E-03
38	GO:0010584: pollen exine formation	6.01E-03
39	GO:0016117: carotenoid biosynthetic process	6.35E-03
40	GO:0010268: brassinosteroid homeostasis	7.06E-03
41	GO:0007059: chromosome segregation	7.42E-03
42	GO:0016132: brassinosteroid biosynthetic process	8.17E-03
43	GO:0007264: small GTPase mediated signal transduction	8.56E-03
44	GO:0016125: sterol metabolic process	9.34E-03
45	GO:0009911: positive regulation of flower development	1.06E-02
46	GO:0080167: response to karrikin	1.09E-02
47	GO:0010411: xyloglucan metabolic process	1.19E-02
48	GO:0048481: plant ovule development	1.27E-02
49	GO:0009910: negative regulation of flower development	1.41E-02
50	GO:0009631: cold acclimation	1.41E-02
51	GO:0007568: aging	1.41E-02
52	GO:0051603: proteolysis involved in cellular protein catabolic process	2.29E-02
53	GO:0010224: response to UV-B	2.29E-02
54	GO:0006417: regulation of translation	2.40E-02
55	GO:0048316: seed development	2.57E-02
56	GO:0009740: gibberellic acid mediated signaling pathway	2.75E-02
57	GO:0006396: RNA processing	2.93E-02
58	GO:0009790: embryo development	3.76E-02
59	GO:0040008: regulation of growth	4.09E-02
60	GO:0007623: circadian rhythm	4.23E-02
61	GO:0045490: pectin catabolic process	4.23E-02
62	GO:0009451: RNA modification	4.30E-02
63	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.58E-02
64	GO:0008380: RNA splicing	4.80E-02
65	GO:0010468: regulation of gene expression	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
2	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
3	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
4	GO:0004561: alpha-N-acetylglucosaminidase activity	0.00E+00
5	GO:0046905: phytoene synthase activity	0.00E+00
6	GO:0004830: tryptophan-tRNA ligase activity	8.09E-05
7	GO:0005290: L-histidine transmembrane transporter activity	8.09E-05
8	GO:0051996: squalene synthase activity	8.09E-05
9	GO:0004829: threonine-tRNA ligase activity	1.93E-04
10	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.93E-04
11	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	1.93E-04
12	GO:0050017: L-3-cyanoalanine synthase activity	1.93E-04
13	GO:0000064: L-ornithine transmembrane transporter activity	1.93E-04
14	GO:0004176: ATP-dependent peptidase activity	2.94E-04
15	GO:0016805: dipeptidase activity	3.24E-04
16	GO:0015189: L-lysine transmembrane transporter activity	4.66E-04
17	GO:0009678: hydrogen-translocating pyrophosphatase activity	4.66E-04
18	GO:0015181: arginine transmembrane transporter activity	4.66E-04
19	GO:0070628: proteasome binding	6.21E-04
20	GO:0009044: xylan 1,4-beta-xylosidase activity	6.21E-04
21	GO:0010385: double-stranded methylated DNA binding	6.21E-04
22	GO:0046556: alpha-L-arabinofuranosidase activity	6.21E-04
23	GO:0008237: metallopeptidase activity	7.56E-04
24	GO:0031593: polyubiquitin binding	9.59E-04
25	GO:0004124: cysteine synthase activity	1.14E-03
26	GO:0004656: procollagen-proline 4-dioxygenase activity	1.14E-03
27	GO:0004427: inorganic diphosphatase activity	1.34E-03
28	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	1.76E-03
29	GO:0003723: RNA binding	2.42E-03
30	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.71E-03
31	GO:0008266: poly(U) RNA binding	3.52E-03
32	GO:0043130: ubiquitin binding	4.40E-03
33	GO:0031418: L-ascorbic acid binding	4.40E-03
34	GO:0030570: pectate lyase activity	5.67E-03
35	GO:0004812: aminoacyl-tRNA ligase activity	6.35E-03
36	GO:0004402: histone acetyltransferase activity	6.70E-03
37	GO:0008536: Ran GTPase binding	7.06E-03
38	GO:0001085: RNA polymerase II transcription factor binding	7.06E-03
39	GO:0010181: FMN binding	7.42E-03
40	GO:0030246: carbohydrate binding	8.15E-03
41	GO:0003682: chromatin binding	9.30E-03
42	GO:0003684: damaged DNA binding	9.34E-03
43	GO:0005506: iron ion binding	1.34E-02
44	GO:0004222: metalloendopeptidase activity	1.37E-02
45	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.41E-02
46	GO:0042393: histone binding	1.65E-02
47	GO:0004185: serine-type carboxypeptidase activity	1.80E-02
48	GO:0051537: 2 iron, 2 sulfur cluster binding	1.91E-02
49	GO:0004672: protein kinase activity	2.23E-02
50	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.43E-02
51	GO:0016829: lyase activity	3.56E-02
52	GO:0030170: pyridoxal phosphate binding	3.62E-02
53	GO:0004252: serine-type endopeptidase activity	3.62E-02
54	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.69E-02
55	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.78E-02
56	GO:0008565: protein transporter activity	3.82E-02
57	GO:0005525: GTP binding	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	5.53E-08
2	GO:0030529: intracellular ribonucleoprotein complex	4.95E-05
3	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	6.21E-04
4	GO:0009570: chloroplast stroma	1.65E-03
5	GO:0016324: apical plasma membrane	2.46E-03
6	GO:0009941: chloroplast envelope	2.82E-03
7	GO:0005578: proteinaceous extracellular matrix	3.24E-03
8	GO:0009532: plastid stroma	5.02E-03
9	GO:0009295: nucleoid	9.75E-03
10	GO:0031225: anchored component of membrane	9.83E-03
11	GO:0009535: chloroplast thylakoid membrane	1.02E-02
12	GO:0031969: chloroplast membrane	1.09E-02
13	GO:0005667: transcription factor complex	1.14E-02
14	GO:0005743: mitochondrial inner membrane	1.50E-02
15	GO:0009505: plant-type cell wall	1.82E-02
16	GO:0005856: cytoskeleton	1.96E-02
17	GO:0009706: chloroplast inner membrane	2.87E-02
18	GO:0010287: plastoglobule	3.24E-02
19	GO:0005623: cell	3.43E-02
20	GO:0005773: vacuole	3.69E-02
21	GO:0005802: trans-Golgi network	4.58E-02
22	GO:0005886: plasma membrane	4.81E-02