Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G18710

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
2GO:0045184: establishment of protein localization0.00E+00
3GO:0009606: tropism0.00E+00
4GO:1905421: regulation of plant organ morphogenesis0.00E+00
5GO:0031222: arabinan catabolic process0.00E+00
6GO:1903224: regulation of endodermal cell differentiation0.00E+00
7GO:0030155: regulation of cell adhesion0.00E+00
8GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
9GO:0090071: negative regulation of ribosome biogenesis0.00E+00
10GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process0.00E+00
11GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
12GO:0009451: RNA modification1.63E-06
13GO:0009734: auxin-activated signaling pathway9.94E-06
14GO:0042793: transcription from plastid promoter1.32E-05
15GO:0046620: regulation of organ growth4.99E-05
16GO:0009657: plastid organization6.95E-05
17GO:0010306: rhamnogalacturonan II biosynthetic process1.21E-04
18GO:0016556: mRNA modification1.21E-04
19GO:0046739: transport of virus in multicellular host1.21E-04
20GO:0009733: response to auxin1.73E-04
21GO:0051322: anaphase2.05E-04
22GO:0009828: plant-type cell wall loosening3.05E-04
23GO:0009664: plant-type cell wall organization3.60E-04
24GO:0042026: protein refolding5.75E-04
25GO:0042371: vitamin K biosynthetic process6.37E-04
26GO:0015904: tetracycline transport6.37E-04
27GO:0035987: endodermal cell differentiation6.37E-04
28GO:0090558: plant epidermis development6.37E-04
29GO:0006436: tryptophanyl-tRNA aminoacylation6.37E-04
30GO:0034757: negative regulation of iron ion transport6.37E-04
31GO:0070509: calcium ion import6.37E-04
32GO:0010729: positive regulation of hydrogen peroxide biosynthetic process6.37E-04
33GO:0042659: regulation of cell fate specification6.37E-04
34GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process6.37E-04
35GO:0010063: positive regulation of trichoblast fate specification6.37E-04
36GO:0010480: microsporocyte differentiation6.37E-04
37GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic6.37E-04
38GO:0010103: stomatal complex morphogenesis7.35E-04
39GO:0048528: post-embryonic root development7.35E-04
40GO:0048437: floral organ development7.35E-04
41GO:0010497: plasmodesmata-mediated intercellular transport1.11E-03
42GO:0007389: pattern specification process1.11E-03
43GO:0009658: chloroplast organization1.18E-03
44GO:0048868: pollen tube development1.23E-03
45GO:0009926: auxin polar transport1.31E-03
46GO:0000373: Group II intron splicing1.33E-03
47GO:0000902: cell morphogenesis1.33E-03
48GO:0009220: pyrimidine ribonucleotide biosynthetic process1.37E-03
49GO:1902326: positive regulation of chlorophyll biosynthetic process1.37E-03
50GO:1904143: positive regulation of carotenoid biosynthetic process1.37E-03
51GO:0080009: mRNA methylation1.37E-03
52GO:2000123: positive regulation of stomatal complex development1.37E-03
53GO:0010271: regulation of chlorophyll catabolic process1.37E-03
54GO:0018026: peptidyl-lysine monomethylation1.37E-03
55GO:0009662: etioplast organization1.37E-03
56GO:1900033: negative regulation of trichome patterning1.37E-03
57GO:0042325: regulation of phosphorylation1.37E-03
58GO:0060359: response to ammonium ion1.37E-03
59GO:0048255: mRNA stabilization1.37E-03
60GO:1900865: chloroplast RNA modification1.57E-03
61GO:0010583: response to cyclopentenone1.75E-03
62GO:0006949: syncytium formation1.84E-03
63GO:0040008: regulation of growth1.89E-03
64GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.95E-03
65GO:0010252: auxin homeostasis2.06E-03
66GO:0001578: microtubule bundle formation2.26E-03
67GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic2.26E-03
68GO:0080117: secondary growth2.26E-03
69GO:0043157: response to cation stress2.26E-03
70GO:0045910: negative regulation of DNA recombination2.26E-03
71GO:0005977: glycogen metabolic process2.26E-03
72GO:0006954: inflammatory response2.26E-03
73GO:0006518: peptide metabolic process2.26E-03
74GO:0048281: inflorescence morphogenesis2.26E-03
75GO:0090708: specification of plant organ axis polarity2.26E-03
76GO:0042780: tRNA 3'-end processing2.26E-03
77GO:0045037: protein import into chloroplast stroma2.44E-03
78GO:0010207: photosystem II assembly3.14E-03
79GO:0010071: root meristem specification3.28E-03
80GO:0051513: regulation of monopolar cell growth3.28E-03
81GO:0031048: chromatin silencing by small RNA3.28E-03
82GO:0010148: transpiration3.28E-03
83GO:0051085: chaperone mediated protein folding requiring cofactor3.28E-03
84GO:1902476: chloride transmembrane transport3.28E-03
85GO:0010239: chloroplast mRNA processing3.28E-03
86GO:0051289: protein homotetramerization3.28E-03
87GO:0019048: modulation by virus of host morphology or physiology3.28E-03
88GO:0048481: plant ovule development3.64E-03
89GO:0009826: unidimensional cell growth4.15E-03
90GO:0009416: response to light stimulus4.16E-03
91GO:0006221: pyrimidine nucleotide biosynthetic process4.43E-03
92GO:0010021: amylopectin biosynthetic process4.43E-03
93GO:0030104: water homeostasis4.43E-03
94GO:0051567: histone H3-K9 methylation4.43E-03
95GO:0006479: protein methylation4.43E-03
96GO:0048629: trichome patterning4.43E-03
97GO:2000038: regulation of stomatal complex development4.43E-03
98GO:0042274: ribosomal small subunit biogenesis4.43E-03
99GO:0006021: inositol biosynthetic process4.43E-03
100GO:0044205: 'de novo' UMP biosynthetic process4.43E-03
101GO:0051302: regulation of cell division4.82E-03
102GO:0006418: tRNA aminoacylation for protein translation4.82E-03
103GO:0016998: cell wall macromolecule catabolic process5.30E-03
104GO:0048497: maintenance of floral organ identity5.69E-03
105GO:0016123: xanthophyll biosynthetic process5.69E-03
106GO:0009107: lipoate biosynthetic process5.69E-03
107GO:0010158: abaxial cell fate specification5.69E-03
108GO:0010375: stomatal complex patterning5.69E-03
109GO:0010236: plastoquinone biosynthetic process5.69E-03
110GO:0010082: regulation of root meristem growth6.35E-03
111GO:0009831: plant-type cell wall modification involved in multidimensional cell growth6.35E-03
112GO:0010315: auxin efflux7.06E-03
113GO:0009913: epidermal cell differentiation7.06E-03
114GO:0006655: phosphatidylglycerol biosynthetic process7.06E-03
115GO:1902456: regulation of stomatal opening7.06E-03
116GO:0010405: arabinogalactan protein metabolic process7.06E-03
117GO:0048831: regulation of shoot system development7.06E-03
118GO:0009959: negative gravitropism7.06E-03
119GO:0018258: protein O-linked glycosylation via hydroxyproline7.06E-03
120GO:0016458: gene silencing7.06E-03
121GO:0016554: cytidine to uridine editing7.06E-03
122GO:0050665: hydrogen peroxide biosynthetic process7.06E-03
123GO:0005975: carbohydrate metabolic process8.04E-03
124GO:0000226: microtubule cytoskeleton organization8.11E-03
125GO:0009854: oxidative photosynthetic carbon pathway8.54E-03
126GO:0042372: phylloquinone biosynthetic process8.54E-03
127GO:2000067: regulation of root morphogenesis8.54E-03
128GO:1901259: chloroplast rRNA processing8.54E-03
129GO:0006458: 'de novo' protein folding8.54E-03
130GO:0009955: adaxial/abaxial pattern specification8.54E-03
131GO:0017148: negative regulation of translation8.54E-03
132GO:0009942: longitudinal axis specification8.54E-03
133GO:0048509: regulation of meristem development8.54E-03
134GO:0030488: tRNA methylation8.54E-03
135GO:0009741: response to brassinosteroid8.75E-03
136GO:0048544: recognition of pollen9.42E-03
137GO:0009739: response to gibberellin9.77E-03
138GO:0006821: chloride transport1.01E-02
139GO:0006955: immune response1.01E-02
140GO:0070370: cellular heat acclimation1.01E-02
141GO:0007050: cell cycle arrest1.01E-02
142GO:0009772: photosynthetic electron transport in photosystem II1.01E-02
143GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process1.01E-02
144GO:0010444: guard mother cell differentiation1.01E-02
145GO:0010050: vegetative phase change1.01E-02
146GO:0009630: gravitropism1.16E-02
147GO:0055075: potassium ion homeostasis1.18E-02
148GO:0001522: pseudouridine synthesis1.18E-02
149GO:0000105: histidine biosynthetic process1.18E-02
150GO:0048766: root hair initiation1.18E-02
151GO:0048564: photosystem I assembly1.18E-02
152GO:0009850: auxin metabolic process1.18E-02
153GO:0001558: regulation of cell growth1.36E-02
154GO:0010204: defense response signaling pathway, resistance gene-independent1.36E-02
155GO:0009827: plant-type cell wall modification1.36E-02
156GO:0000910: cytokinesis1.49E-02
157GO:0006098: pentose-phosphate shunt1.54E-02
158GO:0001666: response to hypoxia1.58E-02
159GO:0010027: thylakoid membrane organization1.58E-02
160GO:0009742: brassinosteroid mediated signaling pathway1.69E-02
161GO:0042761: very long-chain fatty acid biosynthetic process1.74E-02
162GO:2000280: regulation of root development1.74E-02
163GO:0031425: chloroplast RNA processing1.74E-02
164GO:0009638: phototropism1.74E-02
165GO:0010411: xyloglucan metabolic process1.86E-02
166GO:0030422: production of siRNA involved in RNA interference1.94E-02
167GO:0048829: root cap development1.94E-02
168GO:0006259: DNA metabolic process1.94E-02
169GO:0045036: protein targeting to chloroplast1.94E-02
170GO:0006298: mismatch repair1.94E-02
171GO:0006535: cysteine biosynthetic process from serine1.94E-02
172GO:0048229: gametophyte development2.15E-02
173GO:0008285: negative regulation of cell proliferation2.15E-02
174GO:0006265: DNA topological change2.15E-02
175GO:0010015: root morphogenesis2.15E-02
176GO:0000160: phosphorelay signal transduction system2.17E-02
177GO:0016024: CDP-diacylglycerol biosynthetic process2.37E-02
178GO:0010582: floral meristem determinacy2.37E-02
179GO:0006790: sulfur compound metabolic process2.37E-02
180GO:0006865: amino acid transport2.50E-02
181GO:0009790: embryo development2.54E-02
182GO:0006094: gluconeogenesis2.60E-02
183GO:0010102: lateral root morphogenesis2.60E-02
184GO:0050826: response to freezing2.60E-02
185GO:0009785: blue light signaling pathway2.60E-02
186GO:0010075: regulation of meristem growth2.60E-02
187GO:0009691: cytokinin biosynthetic process2.60E-02
188GO:0010588: cotyledon vascular tissue pattern formation2.60E-02
189GO:0009934: regulation of meristem structural organization2.83E-02
190GO:0070588: calcium ion transmembrane transport3.07E-02
191GO:0046854: phosphatidylinositol phosphorylation3.07E-02
192GO:0006833: water transport3.32E-02
193GO:0010114: response to red light3.37E-02
194GO:0008283: cell proliferation3.37E-02
195GO:0042546: cell wall biogenesis3.51E-02
196GO:0009944: polarity specification of adaxial/abaxial axis3.57E-02
197GO:0019344: cysteine biosynthetic process3.57E-02
198GO:0080147: root hair cell development3.57E-02
199GO:0009116: nucleoside metabolic process3.57E-02
200GO:0010073: meristem maintenance3.83E-02
201GO:0019953: sexual reproduction3.83E-02
202GO:0006855: drug transmembrane transport3.93E-02
203GO:0015992: proton transport4.10E-02
204GO:0031408: oxylipin biosynthetic process4.10E-02
205GO:0061077: chaperone-mediated protein folding4.10E-02
206GO:0003333: amino acid transmembrane transport4.10E-02
207GO:0006306: DNA methylation4.10E-02
208GO:0048364: root development4.15E-02
209GO:0007005: mitochondrion organization4.37E-02
210GO:0031348: negative regulation of defense response4.37E-02
211GO:0016226: iron-sulfur cluster assembly4.37E-02
212GO:0019748: secondary metabolic process4.37E-02
213GO:0006730: one-carbon metabolic process4.37E-02
214GO:0006508: proteolysis4.38E-02
215GO:0009736: cytokinin-activated signaling pathway4.53E-02
216GO:0071555: cell wall organization4.56E-02
217GO:0071215: cellular response to abscisic acid stimulus4.65E-02
218GO:0001944: vasculature development4.65E-02
219GO:0009686: gibberellin biosynthetic process4.65E-02
220GO:0009793: embryo development ending in seed dormancy4.82E-02
221GO:0042127: regulation of cell proliferation4.93E-02
RankGO TermAdjusted P value
1GO:0070009: serine-type aminopeptidase activity0.00E+00
2GO:0071633: dihydroceramidase activity0.00E+00
3GO:0052834: inositol monophosphate phosphatase activity0.00E+00
4GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
5GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
6GO:0004401: histidinol-phosphatase activity0.00E+00
7GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
8GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity0.00E+00
9GO:0004056: argininosuccinate lyase activity0.00E+00
10GO:0004519: endonuclease activity4.45E-08
11GO:0003723: RNA binding4.27E-06
12GO:0001872: (1->3)-beta-D-glucan binding1.21E-04
13GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity6.37E-04
14GO:0051777: ent-kaurenoate oxidase activity6.37E-04
15GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity6.37E-04
16GO:0010347: L-galactose-1-phosphate phosphatase activity6.37E-04
17GO:0016274: protein-arginine N-methyltransferase activity6.37E-04
18GO:0052381: tRNA dimethylallyltransferase activity6.37E-04
19GO:0005227: calcium activated cation channel activity6.37E-04
20GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity6.37E-04
21GO:0042834: peptidoglycan binding6.37E-04
22GO:0004830: tryptophan-tRNA ligase activity6.37E-04
23GO:0008173: RNA methyltransferase activity1.11E-03
24GO:0008805: carbon-monoxide oxygenase activity1.37E-03
25GO:0008934: inositol monophosphate 1-phosphatase activity1.37E-03
26GO:0017118: lipoyltransferase activity1.37E-03
27GO:0008493: tetracycline transporter activity1.37E-03
28GO:0052833: inositol monophosphate 4-phosphatase activity1.37E-03
29GO:0016415: octanoyltransferase activity1.37E-03
30GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity1.37E-03
31GO:0004047: aminomethyltransferase activity1.37E-03
32GO:0003988: acetyl-CoA C-acyltransferase activity1.37E-03
33GO:0009884: cytokinin receptor activity1.37E-03
34GO:0019156: isoamylase activity1.37E-03
35GO:0004326: tetrahydrofolylpolyglutamate synthase activity1.37E-03
36GO:0052832: inositol monophosphate 3-phosphatase activity1.37E-03
37GO:0009672: auxin:proton symporter activity1.57E-03
38GO:0044183: protein binding involved in protein folding2.13E-03
39GO:0016805: dipeptidase activity2.26E-03
40GO:0042781: 3'-tRNA processing endoribonuclease activity2.26E-03
41GO:0005034: osmosensor activity2.26E-03
42GO:0070330: aromatase activity2.26E-03
43GO:0017150: tRNA dihydrouridine synthase activity2.26E-03
44GO:0010329: auxin efflux transmembrane transporter activity2.78E-03
45GO:0004650: polygalacturonase activity3.10E-03
46GO:0009041: uridylate kinase activity3.28E-03
47GO:0043023: ribosomal large subunit binding3.28E-03
48GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity3.28E-03
49GO:0009678: hydrogen-translocating pyrophosphatase activity3.28E-03
50GO:0035197: siRNA binding3.28E-03
51GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity3.28E-03
52GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity3.28E-03
53GO:0004222: metalloendopeptidase activity4.13E-03
54GO:0046556: alpha-L-arabinofuranosidase activity4.43E-03
55GO:0019199: transmembrane receptor protein kinase activity4.43E-03
56GO:0004659: prenyltransferase activity4.43E-03
57GO:0016279: protein-lysine N-methyltransferase activity4.43E-03
58GO:0004930: G-protein coupled receptor activity4.43E-03
59GO:0005253: anion channel activity4.43E-03
60GO:0042277: peptide binding4.43E-03
61GO:0008891: glycolate oxidase activity4.43E-03
62GO:0016829: lyase activity5.68E-03
63GO:0016773: phosphotransferase activity, alcohol group as acceptor5.69E-03
64GO:0004888: transmembrane signaling receptor activity5.69E-03
65GO:0005275: amine transmembrane transporter activity5.69E-03
66GO:0018685: alkane 1-monooxygenase activity5.69E-03
67GO:0030570: pectate lyase activity6.35E-03
68GO:0030983: mismatched DNA binding7.06E-03
69GO:0004605: phosphatidate cytidylyltransferase activity7.06E-03
70GO:0005247: voltage-gated chloride channel activity7.06E-03
71GO:1990714: hydroxyproline O-galactosyltransferase activity7.06E-03
72GO:0004556: alpha-amylase activity7.06E-03
73GO:0004332: fructose-bisphosphate aldolase activity7.06E-03
74GO:0004812: aminoacyl-tRNA ligase activity7.49E-03
75GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds7.59E-03
76GO:0016832: aldehyde-lyase activity8.54E-03
77GO:0019900: kinase binding8.54E-03
78GO:0004124: cysteine synthase activity8.54E-03
79GO:0008195: phosphatidate phosphatase activity8.54E-03
80GO:0004656: procollagen-proline 4-dioxygenase activity8.54E-03
81GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity8.54E-03
82GO:0004427: inorganic diphosphatase activity1.01E-02
83GO:0016762: xyloglucan:xyloglucosyl transferase activity1.08E-02
84GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.36E-02
85GO:0008237: metallopeptidase activity1.40E-02
86GO:0051082: unfolded protein binding1.57E-02
87GO:0016798: hydrolase activity, acting on glycosyl bonds1.86E-02
88GO:0030247: polysaccharide binding1.86E-02
89GO:0004673: protein histidine kinase activity1.94E-02
90GO:0019843: rRNA binding2.09E-02
91GO:0015238: drug transmembrane transporter activity2.17E-02
92GO:0004521: endoribonuclease activity2.37E-02
93GO:0004565: beta-galactosidase activity2.60E-02
94GO:0019888: protein phosphatase regulator activity2.60E-02
95GO:0031072: heat shock protein binding2.60E-02
96GO:0009982: pseudouridine synthase activity2.60E-02
97GO:0000155: phosphorelay sensor kinase activity2.60E-02
98GO:0005262: calcium channel activity2.60E-02
99GO:0004022: alcohol dehydrogenase (NAD) activity2.60E-02
100GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.62E-02
101GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.83E-02
102GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.88E-02
103GO:0008017: microtubule binding3.32E-02
104GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.37E-02
105GO:0031418: L-ascorbic acid binding3.57E-02
106GO:0043424: protein histidine kinase binding3.83E-02
107GO:0008408: 3'-5' exonuclease activity4.10E-02
108GO:0004176: ATP-dependent peptidase activity4.10E-02
109GO:0033612: receptor serine/threonine kinase binding4.10E-02
110GO:0005524: ATP binding4.15E-02
111GO:0022891: substrate-specific transmembrane transporter activity4.65E-02
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Gene type



Gene DE type