Gene: AT3G13740
     


Gene description


TAIR ID: AT3G13740

Short description: Ribonuclease III family protein

Pathogen responsiveness: -0.35

General responsiveness: 0.04

GO biological process


ncRNA processing, rRNA 5'-end processing, maturation of 4.5S rRNA


GO cellular component


chloroplast, nucleus


GO molecular function


unkown


Protein domain


PfamPF00636, Ribonuclease III domain
SMARTSM00535, RIBOc

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G18770, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


14 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, Flg22 2 h-1.671.71E-03
GSE17464Penta, controlPenta, Flg22 2 h-1.749.91E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.771.43E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.595.46E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.792.63E-10
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.633.74E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.274.49E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.782.08E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.852.27E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.955.14E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.871.81E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.282.10E-13
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.751.63E-04
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.872.30E-03






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