Gene: AT3G07010
     

Gene description


TAIR ID: AT3G07010

Short description: Pectin lyase-like superfamily protein

Pathogen responsiveness: 0.61

General responsiveness: 0.20

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


pectin catabolic process


GO cellular component


extracellular region


GO molecular function


metal ion binding, pectate lyase activity, lyase activity


Protein domain


PfamPF00544, Pectate lyase
SMARTSM00656, Amb_all

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


29 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 0 hCol, WT, G.orontii 5 d-1.631.84E-02
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h-1.552.74E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d2.538.88E-09
GSE17464Laer, controlLaer, PstDC3000 12 h1.936.87E-06
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d1.801.92E-05
GSE17464Penta, controlPenta, PstDC3000 12 h2.511.08E-08
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.851.15E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.231.71E-11
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.681.85E-13
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.321.73E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.505.45E-13
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.715.98E-14
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.499.52E-04
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.621.86E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.961.85E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.352.17E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.815.71E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.021.53E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-3.101.39E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.501.87E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.697.97E-07
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.055.46E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.491.52E-09
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-2.712.00E-02
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.662.17E-03
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-3.151.06E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.927.04E-03
GSE5685Col, WT, control 16 hCol, WT, Ps ES4326 AvrRpt2 16 h-1.582.84E-02
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-3.071.09E-03






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