GO Enrichment Analysis of Co-expressed Genes with
AT3G07010
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 2 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 3 | GO:0042493: response to drug | 0.00E+00 |
| 4 | GO:0006412: translation | 3.68E-08 |
| 5 | GO:0042254: ribosome biogenesis | 1.50E-07 |
| 6 | GO:0009926: auxin polar transport | 6.80E-07 |
| 7 | GO:0046620: regulation of organ growth | 7.76E-07 |
| 8 | GO:0051513: regulation of monopolar cell growth | 6.29E-06 |
| 9 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.60E-05 |
| 10 | GO:0009958: positive gravitropism | 4.34E-05 |
| 11 | GO:0009828: plant-type cell wall loosening | 8.12E-05 |
| 12 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.18E-04 |
| 13 | GO:0042759: long-chain fatty acid biosynthetic process | 1.18E-04 |
| 14 | GO:0042371: vitamin K biosynthetic process | 1.18E-04 |
| 15 | GO:0006949: syncytium formation | 1.63E-04 |
| 16 | GO:0010541: acropetal auxin transport | 2.73E-04 |
| 17 | GO:0001736: establishment of planar polarity | 2.73E-04 |
| 18 | GO:0010143: cutin biosynthetic process | 2.87E-04 |
| 19 | GO:0010207: photosystem II assembly | 2.87E-04 |
| 20 | GO:0009734: auxin-activated signaling pathway | 2.98E-04 |
| 21 | GO:0006833: water transport | 3.60E-04 |
| 22 | GO:0009664: plant-type cell wall organization | 4.11E-04 |
| 23 | GO:0010160: formation of animal organ boundary | 4.52E-04 |
| 24 | GO:0015840: urea transport | 4.52E-04 |
| 25 | GO:0080055: low-affinity nitrate transport | 4.52E-04 |
| 26 | GO:0045493: xylan catabolic process | 4.52E-04 |
| 27 | GO:0009733: response to auxin | 4.60E-04 |
| 28 | GO:0051085: chaperone mediated protein folding requiring cofactor | 6.47E-04 |
| 29 | GO:0080170: hydrogen peroxide transmembrane transport | 6.47E-04 |
| 30 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 6.47E-04 |
| 31 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 6.47E-04 |
| 32 | GO:0009650: UV protection | 6.47E-04 |
| 33 | GO:0006986: response to unfolded protein | 6.47E-04 |
| 34 | GO:0034220: ion transmembrane transport | 7.29E-04 |
| 35 | GO:0022622: root system development | 8.60E-04 |
| 36 | GO:0030104: water homeostasis | 8.60E-04 |
| 37 | GO:0016042: lipid catabolic process | 9.07E-04 |
| 38 | GO:0010236: plastoquinone biosynthetic process | 1.08E-03 |
| 39 | GO:0042549: photosystem II stabilization | 1.33E-03 |
| 40 | GO:0060918: auxin transport | 1.33E-03 |
| 41 | GO:0045490: pectin catabolic process | 1.38E-03 |
| 42 | GO:0009627: systemic acquired resistance | 1.52E-03 |
| 43 | GO:0042372: phylloquinone biosynthetic process | 1.59E-03 |
| 44 | GO:0015995: chlorophyll biosynthetic process | 1.60E-03 |
| 45 | GO:0009610: response to symbiotic fungus | 1.87E-03 |
| 46 | GO:0009772: photosynthetic electron transport in photosystem II | 1.87E-03 |
| 47 | GO:1900056: negative regulation of leaf senescence | 1.87E-03 |
| 48 | GO:0019745: pentacyclic triterpenoid biosynthetic process | 1.87E-03 |
| 49 | GO:0032880: regulation of protein localization | 1.87E-03 |
| 50 | GO:0009735: response to cytokinin | 1.96E-03 |
| 51 | GO:0048527: lateral root development | 2.04E-03 |
| 52 | GO:0030091: protein repair | 2.16E-03 |
| 53 | GO:0009826: unidimensional cell growth | 2.28E-03 |
| 54 | GO:0032544: plastid translation | 2.46E-03 |
| 55 | GO:0009245: lipid A biosynthetic process | 2.78E-03 |
| 56 | GO:0010206: photosystem II repair | 2.78E-03 |
| 57 | GO:0080167: response to karrikin | 3.14E-03 |
| 58 | GO:0048829: root cap development | 3.46E-03 |
| 59 | GO:0015979: photosynthesis | 3.71E-03 |
| 60 | GO:0010015: root morphogenesis | 3.82E-03 |
| 61 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.82E-03 |
| 62 | GO:0048765: root hair cell differentiation | 3.82E-03 |
| 63 | GO:0008361: regulation of cell size | 4.19E-03 |
| 64 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.19E-03 |
| 65 | GO:2000012: regulation of auxin polar transport | 4.57E-03 |
| 66 | GO:0006006: glucose metabolic process | 4.57E-03 |
| 67 | GO:0010540: basipetal auxin transport | 4.97E-03 |
| 68 | GO:0019253: reductive pentose-phosphate cycle | 4.97E-03 |
| 69 | GO:0019762: glucosinolate catabolic process | 5.79E-03 |
| 70 | GO:0010025: wax biosynthetic process | 5.79E-03 |
| 71 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.79E-03 |
| 72 | GO:0000027: ribosomal large subunit assembly | 6.22E-03 |
| 73 | GO:0051017: actin filament bundle assembly | 6.22E-03 |
| 74 | GO:0048511: rhythmic process | 7.11E-03 |
| 75 | GO:0003333: amino acid transmembrane transport | 7.11E-03 |
| 76 | GO:0009411: response to UV | 8.05E-03 |
| 77 | GO:0009625: response to insect | 8.05E-03 |
| 78 | GO:0048443: stamen development | 8.53E-03 |
| 79 | GO:0006284: base-excision repair | 8.53E-03 |
| 80 | GO:0040008: regulation of growth | 9.00E-03 |
| 81 | GO:0008284: positive regulation of cell proliferation | 9.02E-03 |
| 82 | GO:0042335: cuticle development | 9.53E-03 |
| 83 | GO:0000413: protein peptidyl-prolyl isomerization | 9.53E-03 |
| 84 | GO:0009739: response to gibberellin | 1.06E-02 |
| 85 | GO:0042752: regulation of circadian rhythm | 1.06E-02 |
| 86 | GO:0002229: defense response to oomycetes | 1.16E-02 |
| 87 | GO:0009630: gravitropism | 1.22E-02 |
| 88 | GO:0030163: protein catabolic process | 1.28E-02 |
| 89 | GO:0009639: response to red or far red light | 1.33E-02 |
| 90 | GO:0055085: transmembrane transport | 1.44E-02 |
| 91 | GO:0009658: chloroplast organization | 1.46E-02 |
| 92 | GO:0010027: thylakoid membrane organization | 1.51E-02 |
| 93 | GO:0010411: xyloglucan metabolic process | 1.70E-02 |
| 94 | GO:0010311: lateral root formation | 1.89E-02 |
| 95 | GO:0010218: response to far red light | 1.96E-02 |
| 96 | GO:0007165: signal transduction | 1.98E-02 |
| 97 | GO:0007568: aging | 2.02E-02 |
| 98 | GO:0006865: amino acid transport | 2.09E-02 |
| 99 | GO:0009637: response to blue light | 2.16E-02 |
| 100 | GO:0030001: metal ion transport | 2.37E-02 |
| 101 | GO:0009640: photomorphogenesis | 2.59E-02 |
| 102 | GO:0010114: response to red light | 2.59E-02 |
| 103 | GO:0042742: defense response to bacterium | 2.60E-02 |
| 104 | GO:0071555: cell wall organization | 2.60E-02 |
| 105 | GO:0006281: DNA repair | 2.68E-02 |
| 106 | GO:0006857: oligopeptide transport | 3.36E-02 |
| 107 | GO:0006096: glycolytic process | 3.60E-02 |
| 108 | GO:0009740: gibberellic acid mediated signaling pathway | 3.94E-02 |
| 109 | GO:0042545: cell wall modification | 4.02E-02 |
| 110 | GO:0009624: response to nematode | 4.11E-02 |
| 111 | GO:0006810: transport | 4.18E-02 |
| 112 | GO:0009742: brassinosteroid mediated signaling pathway | 4.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 3 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 4 | GO:0102245: lupan-3beta,20-diol synthase activity | 0.00E+00 |
| 5 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 6 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 7 | GO:0003735: structural constituent of ribosome | 8.54E-11 |
| 8 | GO:0019843: rRNA binding | 2.49E-10 |
| 9 | GO:0005528: FK506 binding | 1.39E-05 |
| 10 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.66E-05 |
| 11 | GO:0052689: carboxylic ester hydrolase activity | 8.35E-05 |
| 12 | GO:0015250: water channel activity | 1.06E-04 |
| 13 | GO:0015200: methylammonium transmembrane transporter activity | 1.18E-04 |
| 14 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.73E-04 |
| 15 | GO:0042389: omega-3 fatty acid desaturase activity | 2.73E-04 |
| 16 | GO:0016788: hydrolase activity, acting on ester bonds | 3.88E-04 |
| 17 | GO:0042300: beta-amyrin synthase activity | 4.52E-04 |
| 18 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 4.52E-04 |
| 19 | GO:0050734: hydroxycinnamoyltransferase activity | 4.52E-04 |
| 20 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 4.52E-04 |
| 21 | GO:0030570: pectate lyase activity | 5.76E-04 |
| 22 | GO:0008097: 5S rRNA binding | 6.47E-04 |
| 23 | GO:0016851: magnesium chelatase activity | 6.47E-04 |
| 24 | GO:0042299: lupeol synthase activity | 6.47E-04 |
| 25 | GO:0010011: auxin binding | 8.60E-04 |
| 26 | GO:0010328: auxin influx transmembrane transporter activity | 8.60E-04 |
| 27 | GO:0009044: xylan 1,4-beta-xylosidase activity | 8.60E-04 |
| 28 | GO:0046556: alpha-L-arabinofuranosidase activity | 8.60E-04 |
| 29 | GO:0015204: urea transmembrane transporter activity | 8.60E-04 |
| 30 | GO:0004659: prenyltransferase activity | 8.60E-04 |
| 31 | GO:0016829: lyase activity | 1.02E-03 |
| 32 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.08E-03 |
| 33 | GO:0016791: phosphatase activity | 1.15E-03 |
| 34 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.33E-03 |
| 35 | GO:0031177: phosphopantetheine binding | 1.33E-03 |
| 36 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.33E-03 |
| 37 | GO:0008519: ammonium transmembrane transporter activity | 1.33E-03 |
| 38 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.59E-03 |
| 39 | GO:0000035: acyl binding | 1.59E-03 |
| 40 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 2.16E-03 |
| 41 | GO:0003993: acid phosphatase activity | 2.33E-03 |
| 42 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.46E-03 |
| 43 | GO:0010329: auxin efflux transmembrane transporter activity | 4.57E-03 |
| 44 | GO:0008266: poly(U) RNA binding | 4.97E-03 |
| 45 | GO:0008083: growth factor activity | 4.97E-03 |
| 46 | GO:0004650: polygalacturonase activity | 4.99E-03 |
| 47 | GO:0051087: chaperone binding | 6.66E-03 |
| 48 | GO:0004707: MAP kinase activity | 7.11E-03 |
| 49 | GO:0008080: N-acetyltransferase activity | 1.00E-02 |
| 50 | GO:0051015: actin filament binding | 1.28E-02 |
| 51 | GO:0008236: serine-type peptidase activity | 1.76E-02 |
| 52 | GO:0050661: NADP binding | 2.37E-02 |
| 53 | GO:0004722: protein serine/threonine phosphatase activity | 2.39E-02 |
| 54 | GO:0015293: symporter activity | 2.81E-02 |
| 55 | GO:0005215: transporter activity | 2.94E-02 |
| 56 | GO:0051287: NAD binding | 2.96E-02 |
| 57 | GO:0015171: amino acid transmembrane transporter activity | 3.44E-02 |
| 58 | GO:0045330: aspartyl esterase activity | 3.44E-02 |
| 59 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.68E-02 |
| 60 | GO:0030599: pectinesterase activity | 3.94E-02 |
| 61 | GO:0051082: unfolded protein binding | 4.11E-02 |
| 62 | GO:0016746: transferase activity, transferring acyl groups | 4.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009570: chloroplast stroma | 7.79E-17 |
| 3 | GO:0009941: chloroplast envelope | 1.51E-12 |
| 4 | GO:0009507: chloroplast | 1.73E-12 |
| 5 | GO:0005840: ribosome | 5.86E-09 |
| 6 | GO:0009579: thylakoid | 8.48E-08 |
| 7 | GO:0016020: membrane | 2.50E-07 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 2.79E-07 |
| 9 | GO:0031977: thylakoid lumen | 5.45E-07 |
| 10 | GO:0005576: extracellular region | 1.31E-06 |
| 11 | GO:0009534: chloroplast thylakoid | 1.41E-05 |
| 12 | GO:0009505: plant-type cell wall | 1.79E-05 |
| 13 | GO:0009535: chloroplast thylakoid membrane | 1.91E-05 |
| 14 | GO:0042807: central vacuole | 5.63E-05 |
| 15 | GO:0043674: columella | 1.18E-04 |
| 16 | GO:0009547: plastid ribosome | 1.18E-04 |
| 17 | GO:0000311: plastid large ribosomal subunit | 2.21E-04 |
| 18 | GO:0009654: photosystem II oxygen evolving complex | 4.41E-04 |
| 19 | GO:0010007: magnesium chelatase complex | 4.52E-04 |
| 20 | GO:0005618: cell wall | 5.12E-04 |
| 21 | GO:0019898: extrinsic component of membrane | 8.98E-04 |
| 22 | GO:0048046: apoplast | 1.41E-03 |
| 23 | GO:0009533: chloroplast stromal thylakoid | 1.87E-03 |
| 24 | GO:0009986: cell surface | 1.87E-03 |
| 25 | GO:0022626: cytosolic ribosome | 2.10E-03 |
| 26 | GO:0000326: protein storage vacuole | 2.46E-03 |
| 27 | GO:0008180: COP9 signalosome | 2.78E-03 |
| 28 | GO:0009506: plasmodesma | 3.40E-03 |
| 29 | GO:0030095: chloroplast photosystem II | 4.97E-03 |
| 30 | GO:0015935: small ribosomal subunit | 7.11E-03 |
| 31 | GO:0005887: integral component of plasma membrane | 7.58E-03 |
| 32 | GO:0015629: actin cytoskeleton | 8.05E-03 |
| 33 | GO:0009705: plant-type vacuole membrane | 9.43E-03 |
| 34 | GO:0019005: SCF ubiquitin ligase complex | 1.82E-02 |
| 35 | GO:0031969: chloroplast membrane | 1.82E-02 |
| 36 | GO:0005886: plasma membrane | 1.85E-02 |
| 37 | GO:0031225: anchored component of membrane | 1.87E-02 |
| 38 | GO:0022625: cytosolic large ribosomal subunit | 1.91E-02 |
| 39 | GO:0005856: cytoskeleton | 2.81E-02 |
| 40 | GO:0005773: vacuole | 2.83E-02 |
| 41 | GO:0000502: proteasome complex | 3.20E-02 |