co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G07010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090279: regulation of calcium ion import	0.00E+00
2	GO:0090697: post-embryonic plant organ morphogenesis	0.00E+00
3	GO:0080127: fruit septum development	0.00E+00
4	GO:1905177: tracheary element differentiation	0.00E+00
5	GO:0071474: cellular hyperosmotic response	0.00E+00
6	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
7	GO:2000469: negative regulation of peroxidase activity	0.00E+00
8	GO:0030155: regulation of cell adhesion	0.00E+00
9	GO:0090706: specification of plant organ position	0.00E+00
10	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	7.85E-06
11	GO:0015979: photosynthesis	1.29E-04
12	GO:0010028: xanthophyll cycle	1.33E-04
13	GO:0010450: inflorescence meristem growth	1.33E-04
14	GO:0005980: glycogen catabolic process	1.33E-04
15	GO:0015995: chlorophyll biosynthetic process	1.71E-04
16	GO:0009773: photosynthetic electron transport in photosystem I	2.29E-04
17	GO:0031648: protein destabilization	3.07E-04
18	GO:0016122: xanthophyll metabolic process	3.07E-04
19	GO:0006521: regulation of cellular amino acid metabolic process	3.07E-04
20	GO:0051262: protein tetramerization	3.07E-04
21	GO:0009944: polarity specification of adaxial/abaxial axis	4.74E-04
22	GO:0010623: programmed cell death involved in cell development	5.06E-04
23	GO:0080055: low-affinity nitrate transport	5.06E-04
24	GO:0045165: cell fate commitment	5.06E-04
25	GO:0048281: inflorescence morphogenesis	5.06E-04
26	GO:0010731: protein glutathionylation	7.24E-04
27	GO:0010148: transpiration	7.24E-04
28	GO:0015846: polyamine transport	9.59E-04
29	GO:0006808: regulation of nitrogen utilization	9.59E-04
30	GO:0051322: anaphase	9.59E-04
31	GO:0006109: regulation of carbohydrate metabolic process	9.59E-04
32	GO:0015994: chlorophyll metabolic process	9.59E-04
33	GO:0010600: regulation of auxin biosynthetic process	9.59E-04
34	GO:0010508: positive regulation of autophagy	9.59E-04
35	GO:0000304: response to singlet oxygen	1.21E-03
36	GO:1902183: regulation of shoot apical meristem development	1.21E-03
37	GO:0010158: abaxial cell fate specification	1.21E-03
38	GO:0010190: cytochrome b6f complex assembly	1.49E-03
39	GO:0003006: developmental process involved in reproduction	1.49E-03
40	GO:0000470: maturation of LSU-rRNA	1.49E-03
41	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.78E-03
42	GO:0070370: cellular heat acclimation	2.09E-03
43	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	2.09E-03
44	GO:0030307: positive regulation of cell growth	2.09E-03
45	GO:0010103: stomatal complex morphogenesis	2.09E-03
46	GO:0010161: red light signaling pathway	2.09E-03
47	GO:0009704: de-etiolation	2.42E-03
48	GO:0010928: regulation of auxin mediated signaling pathway	2.42E-03
49	GO:0006353: DNA-templated transcription, termination	2.42E-03
50	GO:0009735: response to cytokinin	2.55E-03
51	GO:0001558: regulation of cell growth	2.77E-03
52	GO:0010093: specification of floral organ identity	2.77E-03
53	GO:0051865: protein autoubiquitination	3.13E-03
54	GO:2000024: regulation of leaf development	3.13E-03
55	GO:0006783: heme biosynthetic process	3.13E-03
56	GO:0048507: meristem development	3.13E-03
57	GO:0042761: very long-chain fatty acid biosynthetic process	3.50E-03
58	GO:0009409: response to cold	3.64E-03
59	GO:0031627: telomeric loop formation	3.89E-03
60	GO:0006782: protoporphyrinogen IX biosynthetic process	3.89E-03
61	GO:0006810: transport	4.19E-03
62	GO:0019684: photosynthesis, light reaction	4.30E-03
63	GO:0009089: lysine biosynthetic process via diaminopimelate	4.30E-03
64	GO:0043085: positive regulation of catalytic activity	4.30E-03
65	GO:0010015: root morphogenesis	4.30E-03
66	GO:0010582: floral meristem determinacy	4.72E-03
67	GO:0045454: cell redox homeostasis	4.91E-03
68	GO:0010102: lateral root morphogenesis	5.15E-03
69	GO:0009266: response to temperature stimulus	5.60E-03
70	GO:0006302: double-strand break repair	5.60E-03
71	GO:0048467: gynoecium development	5.60E-03
72	GO:0009933: meristem structural organization	5.60E-03
73	GO:0010025: wax biosynthetic process	6.53E-03
74	GO:0008152: metabolic process	7.26E-03
75	GO:0051302: regulation of cell division	7.51E-03
76	GO:0007017: microtubule-based process	7.51E-03
77	GO:0031408: oxylipin biosynthetic process	8.02E-03
78	GO:0051321: meiotic cell cycle	8.02E-03
79	GO:0003333: amino acid transmembrane transport	8.02E-03
80	GO:0019915: lipid storage	8.02E-03
81	GO:0061077: chaperone-mediated protein folding	8.02E-03
82	GO:2000022: regulation of jasmonic acid mediated signaling pathway	8.55E-03
83	GO:0019748: secondary metabolic process	8.55E-03
84	GO:0010017: red or far-red light signaling pathway	8.55E-03
85	GO:0055114: oxidation-reduction process	8.76E-03
86	GO:0001944: vasculature development	9.08E-03
87	GO:0009686: gibberellin biosynthetic process	9.08E-03
88	GO:0010089: xylem development	9.63E-03
89	GO:0006662: glycerol ether metabolic process	1.13E-02
90	GO:0010154: fruit development	1.13E-02
91	GO:0009646: response to absence of light	1.19E-02
92	GO:0010583: response to cyclopentenone	1.38E-02
93	GO:1901657: glycosyl compound metabolic process	1.44E-02
94	GO:0010252: auxin homeostasis	1.51E-02
95	GO:0000910: cytokinesis	1.64E-02
96	GO:0016126: sterol biosynthetic process	1.71E-02
97	GO:0042254: ribosome biogenesis	1.77E-02
98	GO:0009607: response to biotic stimulus	1.78E-02
99	GO:0009627: systemic acquired resistance	1.85E-02
100	GO:0006970: response to osmotic stress	1.88E-02
101	GO:0010218: response to far red light	2.21E-02
102	GO:0048527: lateral root development	2.29E-02
103	GO:0009631: cold acclimation	2.29E-02
104	GO:0034599: cellular response to oxidative stress	2.52E-02
105	GO:0006631: fatty acid metabolic process	2.76E-02
106	GO:0006869: lipid transport	2.84E-02
107	GO:0010114: response to red light	2.92E-02
108	GO:0032259: methylation	3.06E-02
109	GO:0009414: response to water deprivation	3.13E-02
110	GO:0009965: leaf morphogenesis	3.18E-02
111	GO:0009664: plant-type cell wall organization	3.44E-02
112	GO:0009585: red, far-red light phototransduction	3.62E-02
113	GO:0006412: translation	3.67E-02
114	GO:0009733: response to auxin	3.72E-02
115	GO:0006857: oligopeptide transport	3.80E-02
116	GO:0009909: regulation of flower development	3.89E-02
117	GO:0043086: negative regulation of catalytic activity	4.07E-02
118	GO:0009740: gibberellic acid mediated signaling pathway	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
2	GO:0009899: ent-kaurene synthase activity	0.00E+00
3	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
4	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.47E-05
5	GO:0048038: quinone binding	7.86E-05
6	GO:0004645: phosphorylase activity	1.33E-04
7	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.33E-04
8	GO:0005227: calcium activated cation channel activity	1.33E-04
9	GO:0008184: glycogen phosphorylase activity	1.33E-04
10	GO:0004853: uroporphyrinogen decarboxylase activity	1.33E-04
11	GO:0018708: thiol S-methyltransferase activity	3.07E-04
12	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	3.07E-04
13	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	3.07E-04
14	GO:0045174: glutathione dehydrogenase (ascorbate) activity	5.06E-04
15	GO:0080054: low-affinity nitrate transmembrane transporter activity	5.06E-04
16	GO:0017150: tRNA dihydrouridine synthase activity	5.06E-04
17	GO:0015203: polyamine transmembrane transporter activity	7.24E-04
18	GO:0016851: magnesium chelatase activity	7.24E-04
19	GO:0042277: peptide binding	9.59E-04
20	GO:0004506: squalene monooxygenase activity	9.59E-04
21	GO:0019199: transmembrane receptor protein kinase activity	9.59E-04
22	GO:0051920: peroxiredoxin activity	1.78E-03
23	GO:0005261: cation channel activity	1.78E-03
24	GO:0016209: antioxidant activity	2.42E-03
25	GO:0004033: aldo-keto reductase (NADP) activity	2.42E-03
26	GO:0015174: basic amino acid transmembrane transporter activity	3.50E-03
27	GO:0043621: protein self-association	3.67E-03
28	GO:0008047: enzyme activator activity	3.89E-03
29	GO:0044183: protein binding involved in protein folding	4.30E-03
30	GO:0047372: acylglycerol lipase activity	4.30E-03
31	GO:0003691: double-stranded telomeric DNA binding	4.30E-03
32	GO:0000976: transcription regulatory region sequence-specific DNA binding	4.72E-03
33	GO:0004565: beta-galactosidase activity	5.15E-03
34	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	5.56E-03
35	GO:0015035: protein disulfide oxidoreductase activity	6.67E-03
36	GO:0004857: enzyme inhibitor activity	7.01E-03
37	GO:0005528: FK506 binding	7.01E-03
38	GO:0003735: structural constituent of ribosome	7.12E-03
39	GO:0008408: 3'-5' exonuclease activity	8.02E-03
40	GO:0019843: rRNA binding	8.12E-03
41	GO:0030570: pectate lyase activity	9.08E-03
42	GO:0047134: protein-disulfide reductase activity	1.02E-02
43	GO:0001085: RNA polymerase II transcription factor binding	1.13E-02
44	GO:0004791: thioredoxin-disulfide reductase activity	1.19E-02
45	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.44E-02
46	GO:0005200: structural constituent of cytoskeleton	1.57E-02
47	GO:0016597: amino acid binding	1.64E-02
48	GO:0008168: methyltransferase activity	1.68E-02
49	GO:0102483: scopolin beta-glucosidase activity	1.92E-02
50	GO:0050660: flavin adenine dinucleotide binding	2.02E-02
51	GO:0030145: manganese ion binding	2.29E-02
52	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.29E-02
53	GO:0008422: beta-glucosidase activity	2.60E-02
54	GO:0004364: glutathione transferase activity	2.84E-02
55	GO:0004185: serine-type carboxypeptidase activity	2.92E-02
56	GO:0051537: 2 iron, 2 sulfur cluster binding	3.09E-02
57	GO:0015293: symporter activity	3.18E-02
58	GO:0003924: GTPase activity	3.19E-02
59	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.26E-02
60	GO:0009055: electron carrier activity	3.42E-02
61	GO:0008289: lipid binding	4.42E-02
62	GO:0016491: oxidoreductase activity	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
2	GO:0009507: chloroplast	1.71E-14
3	GO:0009535: chloroplast thylakoid membrane	3.51E-12
4	GO:0009570: chloroplast stroma	9.56E-11
5	GO:0009534: chloroplast thylakoid	7.79E-10
6	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.64E-08
7	GO:0009941: chloroplast envelope	3.31E-06
8	GO:0009543: chloroplast thylakoid lumen	1.04E-05
9	GO:0009538: photosystem I reaction center	8.88E-05
10	GO:0000791: euchromatin	1.33E-04
11	GO:0030870: Mre11 complex	3.07E-04
12	GO:0030095: chloroplast photosystem II	3.42E-04
13	GO:0031977: thylakoid lumen	3.44E-04
14	GO:0010007: magnesium chelatase complex	5.06E-04
15	GO:0009654: photosystem II oxygen evolving complex	5.22E-04
16	GO:0015935: small ribosomal subunit	5.72E-04
17	GO:0009579: thylakoid	8.54E-04
18	GO:0019898: extrinsic component of membrane	1.06E-03
19	GO:0000795: synaptonemal complex	1.21E-03
20	GO:0010319: stromule	1.44E-03
21	GO:0000783: nuclear telomere cap complex	2.77E-03
22	GO:0045298: tubulin complex	3.13E-03
23	GO:0009574: preprophase band	5.15E-03
24	GO:0043234: protein complex	6.53E-03
25	GO:0042651: thylakoid membrane	7.51E-03
26	GO:0010287: plastoglobule	7.69E-03
27	GO:0005840: ribosome	9.16E-03
28	GO:0000785: chromatin	1.38E-02
29	GO:0009295: nucleoid	1.57E-02
30	GO:0005667: transcription factor complex	1.85E-02
31	GO:0048046: apoplast	2.01E-02
32	GO:0005874: microtubule	2.09E-02
33	GO:0031966: mitochondrial membrane	3.44E-02
34	GO:0009536: plastid	4.15E-02
35	GO:0005834: heterotrimeric G-protein complex	4.26E-02
36	GO:0009505: plant-type cell wall	4.26E-02