Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G07010

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070125: mitochondrial translational elongation0.00E+00
2GO:0019685: photosynthesis, dark reaction0.00E+00
3GO:0010081: regulation of inflorescence meristem growth0.00E+00
4GO:0009583: detection of light stimulus0.00E+00
5GO:0071000: response to magnetism0.00E+00
6GO:0007638: mechanosensory behavior0.00E+00
7GO:0000372: Group I intron splicing0.00E+00
8GO:0080127: fruit septum development0.00E+00
9GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
10GO:0009733: response to auxin1.77E-06
11GO:0046620: regulation of organ growth1.75E-05
12GO:1902448: positive regulation of shade avoidance2.63E-05
13GO:0000373: Group II intron splicing3.40E-05
14GO:0009926: auxin polar transport5.90E-05
15GO:0010582: floral meristem determinacy9.11E-05
16GO:0009734: auxin-activated signaling pathway1.41E-04
17GO:0016123: xanthophyll biosynthetic process1.56E-04
18GO:0072387: flavin adenine dinucleotide metabolic process4.13E-04
19GO:0043087: regulation of GTPase activity4.13E-04
20GO:0043609: regulation of carbon utilization4.13E-04
21GO:0006436: tryptophanyl-tRNA aminoacylation4.13E-04
22GO:0034757: negative regulation of iron ion transport4.13E-04
23GO:0006419: alanyl-tRNA aminoacylation4.13E-04
24GO:0070509: calcium ion import4.13E-04
25GO:0010080: regulation of floral meristem growth4.13E-04
26GO:0000105: histidine biosynthetic process4.85E-04
27GO:0040008: regulation of growth5.92E-04
28GO:0010583: response to cyclopentenone7.72E-04
29GO:0001736: establishment of planar polarity8.93E-04
30GO:0080009: mRNA methylation8.93E-04
31GO:0009786: regulation of asymmetric cell division8.93E-04
32GO:0010343: singlet oxygen-mediated programmed cell death8.93E-04
33GO:1901529: positive regulation of anion channel activity8.93E-04
34GO:0048255: mRNA stabilization8.93E-04
35GO:0010569: regulation of double-strand break repair via homologous recombination8.93E-04
36GO:0010617: circadian regulation of calcium ion oscillation8.93E-04
37GO:0010271: regulation of chlorophyll catabolic process8.93E-04
38GO:1901959: positive regulation of cutin biosynthetic process8.93E-04
39GO:0099402: plant organ development8.93E-04
40GO:0048829: root cap development9.73E-04
41GO:0006782: protoporphyrinogen IX biosynthetic process9.73E-04
42GO:0045037: protein import into chloroplast stroma1.28E-03
43GO:0006094: gluconeogenesis1.45E-03
44GO:0006000: fructose metabolic process1.45E-03
45GO:0080117: secondary growth1.45E-03
46GO:0010226: response to lithium ion1.45E-03
47GO:0016045: detection of bacterium1.45E-03
48GO:0010022: meristem determinacy1.45E-03
49GO:1901672: positive regulation of systemic acquired resistance1.45E-03
50GO:1904278: positive regulation of wax biosynthetic process1.45E-03
51GO:0080055: low-affinity nitrate transport1.45E-03
52GO:0070588: calcium ion transmembrane transport1.83E-03
53GO:2001141: regulation of RNA biosynthetic process2.10E-03
54GO:0051513: regulation of monopolar cell growth2.10E-03
55GO:0007231: osmosensory signaling pathway2.10E-03
56GO:0051639: actin filament network formation2.10E-03
57GO:0034059: response to anoxia2.10E-03
58GO:1901332: negative regulation of lateral root development2.10E-03
59GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.15E-03
60GO:0051017: actin filament bundle assembly2.27E-03
61GO:0051764: actin crosslink formation2.82E-03
62GO:0009765: photosynthesis, light harvesting2.82E-03
63GO:0033500: carbohydrate homeostasis2.82E-03
64GO:0045723: positive regulation of fatty acid biosynthetic process2.82E-03
65GO:0006021: inositol biosynthetic process2.82E-03
66GO:0008295: spermidine biosynthetic process2.82E-03
67GO:1902347: response to strigolactone2.82E-03
68GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.29E-03
69GO:0010236: plastoquinone biosynthetic process3.61E-03
70GO:0048497: maintenance of floral organ identity3.61E-03
71GO:0010158: abaxial cell fate specification3.61E-03
72GO:0080110: sporopollenin biosynthetic process3.61E-03
73GO:0016120: carotene biosynthetic process3.61E-03
74GO:0010117: photoprotection3.61E-03
75GO:0046283: anthocyanin-containing compound metabolic process3.61E-03
76GO:0016117: carotenoid biosynthetic process3.87E-03
77GO:0009793: embryo development ending in seed dormancy4.34E-03
78GO:0016554: cytidine to uridine editing4.47E-03
79GO:0009913: epidermal cell differentiation4.47E-03
80GO:0060918: auxin transport4.47E-03
81GO:0009920: cell plate formation involved in plant-type cell wall biogenesis4.47E-03
82GO:0048831: regulation of shoot system development4.47E-03
83GO:1901371: regulation of leaf morphogenesis4.47E-03
84GO:0003006: developmental process involved in reproduction4.47E-03
85GO:0009958: positive gravitropism4.52E-03
86GO:0010310: regulation of hydrogen peroxide metabolic process5.38E-03
87GO:0010244: response to low fluence blue light stimulus by blue low-fluence system5.38E-03
88GO:0009942: longitudinal axis specification5.38E-03
89GO:0048509: regulation of meristem development5.38E-03
90GO:0048316: seed development5.57E-03
91GO:0009610: response to symbiotic fungus6.36E-03
92GO:0006955: immune response6.36E-03
93GO:0048528: post-embryonic root development6.36E-03
94GO:1900056: negative regulation of leaf senescence6.36E-03
95GO:0010050: vegetative phase change6.36E-03
96GO:0010098: suspensor development6.36E-03
97GO:0019745: pentacyclic triterpenoid biosynthetic process6.36E-03
98GO:0010444: guard mother cell differentiation6.36E-03
99GO:0000082: G1/S transition of mitotic cell cycle6.36E-03
100GO:0006400: tRNA modification6.36E-03
101GO:0051510: regulation of unidimensional cell growth6.36E-03
102GO:0009828: plant-type cell wall loosening6.77E-03
103GO:0009850: auxin metabolic process7.40E-03
104GO:0032544: plastid translation8.49E-03
105GO:0007389: pattern specification process8.49E-03
106GO:0009932: cell tip growth8.49E-03
107GO:0006002: fructose 6-phosphate metabolic process8.49E-03
108GO:0071482: cellular response to light stimulus8.49E-03
109GO:0009657: plastid organization8.49E-03
110GO:0048574: long-day photoperiodism, flowering8.49E-03
111GO:0015995: chlorophyll biosynthetic process9.54E-03
112GO:0006098: pentose-phosphate shunt9.65E-03
113GO:0090305: nucleic acid phosphodiester bond hydrolysis9.65E-03
114GO:0046916: cellular transition metal ion homeostasis9.65E-03
115GO:0048507: meristem development9.65E-03
116GO:0018298: protein-chromophore linkage1.06E-02
117GO:1900426: positive regulation of defense response to bacterium1.09E-02
118GO:0009638: phototropism1.09E-02
119GO:0006779: porphyrin-containing compound biosynthetic process1.09E-02
120GO:0042761: very long-chain fatty acid biosynthetic process1.09E-02
121GO:1900865: chloroplast RNA modification1.09E-02
122GO:0000160: phosphorelay signal transduction system1.11E-02
123GO:0010311: lateral root formation1.11E-02
124GO:0045036: protein targeting to chloroplast1.21E-02
125GO:0009641: shade avoidance1.21E-02
126GO:0006949: syncytium formation1.21E-02
127GO:0031627: telomeric loop formation1.21E-02
128GO:0009299: mRNA transcription1.21E-02
129GO:0006535: cysteine biosynthetic process from serine1.21E-02
130GO:0006865: amino acid transport1.28E-02
131GO:0048765: root hair cell differentiation1.34E-02
132GO:0006816: calcium ion transport1.34E-02
133GO:0006415: translational termination1.34E-02
134GO:0006352: DNA-templated transcription, initiation1.34E-02
135GO:0006790: sulfur compound metabolic process1.48E-02
136GO:0030001: metal ion transport1.53E-02
137GO:0010075: regulation of meristem growth1.62E-02
138GO:0009725: response to hormone1.62E-02
139GO:0009785: blue light signaling pathway1.62E-02
140GO:0009887: animal organ morphogenesis1.76E-02
141GO:0048467: gynoecium development1.76E-02
142GO:0010207: photosystem II assembly1.76E-02
143GO:0046854: phosphatidylinositol phosphorylation1.91E-02
144GO:0010053: root epidermal cell differentiation1.91E-02
145GO:0080188: RNA-directed DNA methylation1.91E-02
146GO:0007275: multicellular organism development1.93E-02
147GO:0010025: wax biosynthetic process2.06E-02
148GO:0007165: signal transduction2.17E-02
149GO:0009664: plant-type cell wall organization2.18E-02
150GO:0006289: nucleotide-excision repair2.22E-02
151GO:2000377: regulation of reactive oxygen species metabolic process2.22E-02
152GO:0019344: cysteine biosynthetic process2.22E-02
153GO:0007010: cytoskeleton organization2.22E-02
154GO:0009826: unidimensional cell growth2.26E-02
155GO:0009736: cytokinin-activated signaling pathway2.34E-02
156GO:0006418: tRNA aminoacylation for protein translation2.38E-02
157GO:0016998: cell wall macromolecule catabolic process2.55E-02
158GO:0003333: amino acid transmembrane transport2.55E-02
159GO:0016226: iron-sulfur cluster assembly2.72E-02
160GO:0035428: hexose transmembrane transport2.72E-02
161GO:0071215: cellular response to abscisic acid stimulus2.89E-02
162GO:0010082: regulation of root meristem growth2.89E-02
163GO:0009620: response to fungus3.05E-02
164GO:0010584: pollen exine formation3.07E-02
165GO:0006284: base-excision repair3.07E-02
166GO:0042127: regulation of cell proliferation3.07E-02
167GO:0070417: cellular response to cold3.25E-02
168GO:0009624: response to nematode3.34E-02
169GO:0046777: protein autophosphorylation3.36E-02
170GO:0009416: response to light stimulus3.43E-02
171GO:0010087: phloem or xylem histogenesis3.44E-02
172GO:0010118: stomatal movement3.44E-02
173GO:0009742: brassinosteroid mediated signaling pathway3.54E-02
174GO:0010182: sugar mediated signaling pathway3.63E-02
175GO:0048868: pollen tube development3.63E-02
176GO:0046323: glucose import3.63E-02
177GO:0071555: cell wall organization3.63E-02
178GO:0009741: response to brassinosteroid3.63E-02
179GO:0007018: microtubule-based movement3.82E-02
180GO:0042752: regulation of circadian rhythm3.82E-02
181GO:0009646: response to absence of light3.82E-02
182GO:0048544: recognition of pollen3.82E-02
183GO:0045892: negative regulation of transcription, DNA-templated3.94E-02
184GO:0048825: cotyledon development4.01E-02
185GO:0071554: cell wall organization or biogenesis4.21E-02
186GO:0032502: developmental process4.41E-02
187GO:0016032: viral process4.41E-02
188GO:0010252: auxin homeostasis4.83E-02
RankGO TermAdjusted P value
1GO:0010355: homogentisate farnesyltransferase activity0.00E+00
2GO:0052834: inositol monophosphate phosphatase activity0.00E+00
3GO:0010356: homogentisate geranylgeranyltransferase activity0.00E+00
4GO:0010357: homogentisate solanesyltransferase activity0.00E+00
5GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
6GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
7GO:0045435: lycopene epsilon cyclase activity0.00E+00
8GO:0004401: histidinol-phosphatase activity0.00E+00
9GO:0102245: lupan-3beta,20-diol synthase activity0.00E+00
10GO:0001872: (1->3)-beta-D-glucan binding5.73E-05
11GO:0005096: GTPase activator activity2.36E-04
12GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity4.13E-04
13GO:0004830: tryptophan-tRNA ligase activity4.13E-04
14GO:0003879: ATP phosphoribosyltransferase activity4.13E-04
15GO:0010347: L-galactose-1-phosphate phosphatase activity4.13E-04
16GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity4.13E-04
17GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.13E-04
18GO:0005227: calcium activated cation channel activity4.13E-04
19GO:0042834: peptidoglycan binding4.13E-04
20GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity4.13E-04
21GO:0004813: alanine-tRNA ligase activity4.13E-04
22GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity4.13E-04
23GO:0050017: L-3-cyanoalanine synthase activity8.93E-04
24GO:0005094: Rho GDP-dissociation inhibitor activity8.93E-04
25GO:0043425: bHLH transcription factor binding8.93E-04
26GO:0004047: aminomethyltransferase activity8.93E-04
27GO:0004766: spermidine synthase activity8.93E-04
28GO:0052832: inositol monophosphate 3-phosphatase activity8.93E-04
29GO:0004109: coproporphyrinogen oxidase activity8.93E-04
30GO:0008805: carbon-monoxide oxygenase activity8.93E-04
31GO:0008934: inositol monophosphate 1-phosphatase activity8.93E-04
32GO:0052833: inositol monophosphate 4-phosphatase activity8.93E-04
33GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity8.93E-04
34GO:0009884: cytokinin receptor activity8.93E-04
35GO:0005034: osmosensor activity1.45E-03
36GO:0052692: raffinose alpha-galactosidase activity1.45E-03
37GO:0042300: beta-amyrin synthase activity1.45E-03
38GO:0005262: calcium channel activity1.45E-03
39GO:0080054: low-affinity nitrate transmembrane transporter activity1.45E-03
40GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups1.45E-03
41GO:0003725: double-stranded RNA binding1.45E-03
42GO:0003913: DNA photolyase activity1.45E-03
43GO:0004148: dihydrolipoyl dehydrogenase activity1.45E-03
44GO:0004557: alpha-galactosidase activity1.45E-03
45GO:0009882: blue light photoreceptor activity2.10E-03
46GO:0016149: translation release factor activity, codon specific2.10E-03
47GO:0042299: lupeol synthase activity2.10E-03
48GO:0001053: plastid sigma factor activity2.82E-03
49GO:0010011: auxin binding2.82E-03
50GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed2.82E-03
51GO:0016987: sigma factor activity2.82E-03
52GO:0010328: auxin influx transmembrane transporter activity2.82E-03
53GO:0070628: proteasome binding2.82E-03
54GO:0019199: transmembrane receptor protein kinase activity2.82E-03
55GO:0030570: pectate lyase activity3.29E-03
56GO:0005471: ATP:ADP antiporter activity3.61E-03
57GO:0008725: DNA-3-methyladenine glycosylase activity3.61E-03
58GO:2001070: starch binding4.47E-03
59GO:0004332: fructose-bisphosphate aldolase activity4.47E-03
60GO:0004709: MAP kinase kinase kinase activity4.47E-03
61GO:0031593: polyubiquitin binding4.47E-03
62GO:0019900: kinase binding5.38E-03
63GO:0004124: cysteine synthase activity5.38E-03
64GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.38E-03
65GO:0051015: actin filament binding6.36E-03
66GO:0009881: photoreceptor activity6.36E-03
67GO:0046914: transition metal ion binding8.49E-03
68GO:0005515: protein binding9.07E-03
69GO:0030247: polysaccharide binding9.54E-03
70GO:0003747: translation release factor activity9.65E-03
71GO:0071949: FAD binding9.65E-03
72GO:0009672: auxin:proton symporter activity1.09E-02
73GO:0042803: protein homodimerization activity1.15E-02
74GO:0004673: protein histidine kinase activity1.21E-02
75GO:0004161: dimethylallyltranstransferase activity1.34E-02
76GO:0003691: double-stranded telomeric DNA binding1.34E-02
77GO:0000976: transcription regulatory region sequence-specific DNA binding1.48E-02
78GO:0000049: tRNA binding1.48E-02
79GO:0000155: phosphorelay sensor kinase activity1.62E-02
80GO:0004565: beta-galactosidase activity1.62E-02
81GO:0010329: auxin efflux transmembrane transporter activity1.62E-02
82GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.76E-02
83GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.77E-02
84GO:0042802: identical protein binding1.85E-02
85GO:0043621: protein self-association1.88E-02
86GO:0035091: phosphatidylinositol binding1.88E-02
87GO:0003712: transcription cofactor activity1.91E-02
88GO:0003723: RNA binding2.04E-02
89GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity2.06E-02
90GO:0102336: 3-oxo-arachidoyl-CoA synthase activity2.06E-02
91GO:0102337: 3-oxo-cerotoyl-CoA synthase activity2.06E-02
92GO:0043130: ubiquitin binding2.22E-02
93GO:0043424: protein histidine kinase binding2.38E-02
94GO:0016301: kinase activity2.52E-02
95GO:0015171: amino acid transmembrane transporter activity2.60E-02
96GO:0004672: protein kinase activity2.73E-02
97GO:0004674: protein serine/threonine kinase activity2.79E-02
98GO:0003779: actin binding3.24E-02
99GO:0004812: aminoacyl-tRNA ligase activity3.25E-02
100GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity3.63E-02
101GO:0008536: Ran GTPase binding3.63E-02
102GO:0005355: glucose transmembrane transporter activity3.82E-02
103GO:0050662: coenzyme binding3.82E-02
104GO:0010181: FMN binding3.82E-02
105GO:0005524: ATP binding3.94E-02
106GO:0019843: rRNA binding4.17E-02
107GO:0016762: xyloglucan:xyloglucosyl transferase activity4.21E-02
108GO:0004518: nuclease activity4.41E-02
109GO:0016829: lyase activity4.51E-02
110GO:0000156: phosphorelay response regulator activity4.62E-02
111GO:0003684: damaged DNA binding4.83E-02
112GO:0016791: phosphatase activity4.83E-02
113GO:0008565: protein transporter activity4.97E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.76E-06
2GO:0005886: plasma membrane1.02E-04
3GO:0009986: cell surface3.88E-04
4GO:0009570: chloroplast stroma4.86E-04
5GO:0031225: anchored component of membrane8.17E-04
6GO:0046658: anchored component of plasma membrane1.05E-03
7GO:0016605: PML body1.45E-03
8GO:0030139: endocytic vesicle1.45E-03
9GO:0032585: multivesicular body membrane2.10E-03
10GO:0032432: actin filament bundle2.10E-03
11GO:0009532: plastid stroma2.75E-03
12GO:0009941: chloroplast envelope4.94E-03
13GO:0005655: nucleolar ribonuclease P complex5.38E-03
14GO:0030529: intracellular ribonucleoprotein complex8.09E-03
15GO:0000783: nuclear telomere cap complex8.49E-03
16GO:0005623: cell9.33E-03
17GO:0016604: nuclear body1.09E-02
18GO:0005884: actin filament1.34E-02
19GO:0000311: plastid large ribosomal subunit1.48E-02
20GO:0005578: proteinaceous extracellular matrix1.62E-02
21GO:0009574: preprophase band1.62E-02
22GO:0030095: chloroplast photosystem II1.76E-02
23GO:0009536: plastid1.95E-02
24GO:0009505: plant-type cell wall2.03E-02
25GO:0009654: photosystem II oxygen evolving complex2.38E-02
26GO:0015629: actin cytoskeleton2.89E-02
27GO:0031969: chloroplast membrane3.10E-02
28GO:0005871: kinesin complex3.25E-02
29GO:0009706: chloroplast inner membrane3.34E-02
30GO:0019898: extrinsic component of membrane4.01E-02
31GO:0031965: nuclear membrane4.01E-02
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Gene type



Gene DE type