Gene: AT3G02540
Gene description
TAIR ID: AT3G02540
Short description: Rad23 UV excision repair protein family
Pathogen responsiveness: -1.17
General responsiveness: -1.59
Orthologous
Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene
GO biological process
proteasome-mediated ubiquitin-dependent protein catabolic process, nucleotide-excision repair
GO cellular component
nucleus, cytoplasm
GO molecular function
polyubiquitin modification-dependent protein binding, protein binding, damaged DNA binding
Protein domain
| Pfam | PF00627, UBA/TS-N domain |
| Pfam | PF09280, XPC-binding domain |
| Pfam | PF00240, Ubiquitin family |
| SMART | SM00213, UBQ |
| SMART | SM00727, STI1 |
| SMART | SM00165, UBA |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
PATH:ath04141: Protein processing in endoplasmic reticulum
PATH:ath03420: Nucleotide excision repair
click to view PPI networkCoexpression network
Differentially expressed condition 
8 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17464 | Penta, control | Penta, Alternaria brassicicola 3 d | 1.90 | 1.37E-11 |
| GSE17464 | Penta, control | Penta, PstDC3000 12 h | 1.61 | 2.39E-09 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -1.86 | 8.60E-14 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -1.65 | 5.12E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -1.73 | 3.23E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -2.12 | 1.48E-14 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -1.59 | 1.70E-08 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | -1.57 | 2.77E-03 |
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