GO Enrichment Analysis of Co-expressed Genes with
AT3G02540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015717: triose phosphate transport | 0.00E+00 |
| 2 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 3 | GO:0015970: guanosine tetraphosphate biosynthetic process | 0.00E+00 |
| 4 | GO:0015995: chlorophyll biosynthetic process | 2.72E-05 |
| 5 | GO:0000476: maturation of 4.5S rRNA | 5.34E-05 |
| 6 | GO:0000967: rRNA 5'-end processing | 5.34E-05 |
| 7 | GO:0015979: photosynthesis | 1.14E-04 |
| 8 | GO:0090342: regulation of cell aging | 1.30E-04 |
| 9 | GO:0034470: ncRNA processing | 1.30E-04 |
| 10 | GO:0035436: triose phosphate transmembrane transport | 2.22E-04 |
| 11 | GO:0009734: auxin-activated signaling pathway | 3.14E-04 |
| 12 | GO:0051205: protein insertion into membrane | 4.35E-04 |
| 13 | GO:0015713: phosphoglycerate transport | 4.35E-04 |
| 14 | GO:0042938: dipeptide transport | 4.35E-04 |
| 15 | GO:0009765: photosynthesis, light harvesting | 4.35E-04 |
| 16 | GO:0045038: protein import into chloroplast thylakoid membrane | 5.52E-04 |
| 17 | GO:0006655: phosphatidylglycerol biosynthetic process | 6.76E-04 |
| 18 | GO:0009643: photosynthetic acclimation | 6.76E-04 |
| 19 | GO:0009942: longitudinal axis specification | 8.05E-04 |
| 20 | GO:0009769: photosynthesis, light harvesting in photosystem II | 9.40E-04 |
| 21 | GO:0009645: response to low light intensity stimulus | 9.40E-04 |
| 22 | GO:0051510: regulation of unidimensional cell growth | 9.40E-04 |
| 23 | GO:0080186: developmental vegetative growth | 9.40E-04 |
| 24 | GO:0009640: photomorphogenesis | 1.03E-03 |
| 25 | GO:0009642: response to light intensity | 1.08E-03 |
| 26 | GO:0007389: pattern specification process | 1.23E-03 |
| 27 | GO:0006629: lipid metabolic process | 1.35E-03 |
| 28 | GO:0048507: meristem development | 1.38E-03 |
| 29 | GO:0010206: photosystem II repair | 1.38E-03 |
| 30 | GO:0006949: syncytium formation | 1.71E-03 |
| 31 | GO:0009698: phenylpropanoid metabolic process | 1.88E-03 |
| 32 | GO:0043085: positive regulation of catalytic activity | 1.88E-03 |
| 33 | GO:0009750: response to fructose | 1.88E-03 |
| 34 | GO:0030148: sphingolipid biosynthetic process | 1.88E-03 |
| 35 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.06E-03 |
| 36 | GO:0015706: nitrate transport | 2.06E-03 |
| 37 | GO:0009887: animal organ morphogenesis | 2.43E-03 |
| 38 | GO:0040008: regulation of growth | 3.16E-03 |
| 39 | GO:0007017: microtubule-based process | 3.24E-03 |
| 40 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.24E-03 |
| 41 | GO:0009269: response to desiccation | 3.46E-03 |
| 42 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 3.90E-03 |
| 43 | GO:0070417: cellular response to cold | 4.36E-03 |
| 44 | GO:0010305: leaf vascular tissue pattern formation | 4.84E-03 |
| 45 | GO:0006662: glycerol ether metabolic process | 4.84E-03 |
| 46 | GO:0009741: response to brassinosteroid | 4.84E-03 |
| 47 | GO:0009826: unidimensional cell growth | 4.90E-03 |
| 48 | GO:0009791: post-embryonic development | 5.34E-03 |
| 49 | GO:0009749: response to glucose | 5.34E-03 |
| 50 | GO:0008654: phospholipid biosynthetic process | 5.34E-03 |
| 51 | GO:0010193: response to ozone | 5.60E-03 |
| 52 | GO:0010583: response to cyclopentenone | 5.86E-03 |
| 53 | GO:0009723: response to ethylene | 5.89E-03 |
| 54 | GO:0080167: response to karrikin | 6.31E-03 |
| 55 | GO:0010252: auxin homeostasis | 6.39E-03 |
| 56 | GO:0009828: plant-type cell wall loosening | 6.39E-03 |
| 57 | GO:0046777: protein autophosphorylation | 6.74E-03 |
| 58 | GO:0010027: thylakoid membrane organization | 7.22E-03 |
| 59 | GO:0009733: response to auxin | 7.87E-03 |
| 60 | GO:0016311: dephosphorylation | 8.38E-03 |
| 61 | GO:0018298: protein-chromophore linkage | 8.68E-03 |
| 62 | GO:0010218: response to far red light | 9.30E-03 |
| 63 | GO:0009910: negative regulation of flower development | 9.61E-03 |
| 64 | GO:0048364: root development | 9.71E-03 |
| 65 | GO:0009637: response to blue light | 1.02E-02 |
| 66 | GO:0034599: cellular response to oxidative stress | 1.06E-02 |
| 67 | GO:0005975: carbohydrate metabolic process | 1.16E-02 |
| 68 | GO:0010114: response to red light | 1.23E-02 |
| 69 | GO:0009926: auxin polar transport | 1.23E-02 |
| 70 | GO:0009744: response to sucrose | 1.23E-02 |
| 71 | GO:0009644: response to high light intensity | 1.30E-02 |
| 72 | GO:0055114: oxidation-reduction process | 1.36E-02 |
| 73 | GO:0009664: plant-type cell wall organization | 1.44E-02 |
| 74 | GO:0010224: response to UV-B | 1.55E-02 |
| 75 | GO:0006857: oligopeptide transport | 1.59E-02 |
| 76 | GO:0007275: multicellular organism development | 1.60E-02 |
| 77 | GO:0009740: gibberellic acid mediated signaling pathway | 1.86E-02 |
| 78 | GO:0009742: brassinosteroid mediated signaling pathway | 2.02E-02 |
| 79 | GO:0009790: embryo development | 2.55E-02 |
| 80 | GO:0006413: translational initiation | 2.73E-02 |
| 81 | GO:0006508: proteolysis | 2.81E-02 |
| 82 | GO:0007623: circadian rhythm | 2.87E-02 |
| 83 | GO:0010150: leaf senescence | 2.87E-02 |
| 84 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.96E-02 |
| 85 | GO:0009739: response to gibberellin | 3.11E-02 |
| 86 | GO:0007166: cell surface receptor signaling pathway | 3.15E-02 |
| 87 | GO:0009658: chloroplast organization | 3.91E-02 |
| 88 | GO:0007049: cell cycle | 4.23E-02 |
| 89 | GO:0009409: response to cold | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 2 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 3 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 4 | GO:0004462: lactoylglutathione lyase activity | 8.00E-06 |
| 5 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 5.34E-05 |
| 6 | GO:0052631: sphingolipid delta-8 desaturase activity | 5.34E-05 |
| 7 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 5.34E-05 |
| 8 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 1.30E-04 |
| 9 | GO:0016630: protochlorophyllide reductase activity | 1.30E-04 |
| 10 | GO:0019172: glyoxalase III activity | 1.30E-04 |
| 11 | GO:0008728: GTP diphosphokinase activity | 1.30E-04 |
| 12 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.30E-04 |
| 13 | GO:0016805: dipeptidase activity | 2.22E-04 |
| 14 | GO:0071917: triose-phosphate transmembrane transporter activity | 2.22E-04 |
| 15 | GO:0004180: carboxypeptidase activity | 2.22E-04 |
| 16 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 2.22E-04 |
| 17 | GO:0008289: lipid binding | 3.08E-04 |
| 18 | GO:0015120: phosphoglycerate transmembrane transporter activity | 4.35E-04 |
| 19 | GO:0042936: dipeptide transporter activity | 4.35E-04 |
| 20 | GO:0004605: phosphatidate cytidylyltransferase activity | 6.76E-04 |
| 21 | GO:0009927: histidine phosphotransfer kinase activity | 8.05E-04 |
| 22 | GO:0004602: glutathione peroxidase activity | 8.05E-04 |
| 23 | GO:0016298: lipase activity | 1.42E-03 |
| 24 | GO:0009672: auxin:proton symporter activity | 1.54E-03 |
| 25 | GO:0008047: enzyme activator activity | 1.71E-03 |
| 26 | GO:0010329: auxin efflux transmembrane transporter activity | 2.25E-03 |
| 27 | GO:0004190: aspartic-type endopeptidase activity | 2.63E-03 |
| 28 | GO:0031409: pigment binding | 2.83E-03 |
| 29 | GO:0047134: protein-disulfide reductase activity | 4.36E-03 |
| 30 | GO:0004791: thioredoxin-disulfide reductase activity | 5.09E-03 |
| 31 | GO:0019901: protein kinase binding | 5.34E-03 |
| 32 | GO:0048038: quinone binding | 5.60E-03 |
| 33 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.12E-03 |
| 34 | GO:0005200: structural constituent of cytoskeleton | 6.66E-03 |
| 35 | GO:0016168: chlorophyll binding | 7.50E-03 |
| 36 | GO:0005215: transporter activity | 7.72E-03 |
| 37 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 8.68E-03 |
| 38 | GO:0003993: acid phosphatase activity | 1.06E-02 |
| 39 | GO:0004185: serine-type carboxypeptidase activity | 1.23E-02 |
| 40 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.30E-02 |
| 41 | GO:0016787: hydrolase activity | 1.79E-02 |
| 42 | GO:0015035: protein disulfide oxidoreductase activity | 1.98E-02 |
| 43 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.32E-02 |
| 44 | GO:0016829: lyase activity | 2.41E-02 |
| 45 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.73E-02 |
| 46 | GO:0005525: GTP binding | 2.73E-02 |
| 47 | GO:0015297: antiporter activity | 2.77E-02 |
| 48 | GO:0003743: translation initiation factor activity | 3.20E-02 |
| 49 | GO:0008168: methyltransferase activity | 3.81E-02 |
| 50 | GO:0016491: oxidoreductase activity | 4.41E-02 |
| 51 | GO:0008233: peptidase activity | 4.50E-02 |
| 52 | GO:0004672: protein kinase activity | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 7.27E-10 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 9.47E-10 |
| 4 | GO:0009507: chloroplast | 2.42E-06 |
| 5 | GO:0009941: chloroplast envelope | 2.18E-04 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 2.41E-04 |
| 7 | GO:0009517: PSII associated light-harvesting complex II | 4.35E-04 |
| 8 | GO:0030660: Golgi-associated vesicle membrane | 4.35E-04 |
| 9 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 4.35E-04 |
| 10 | GO:0009570: chloroplast stroma | 4.78E-04 |
| 11 | GO:0016021: integral component of membrane | 6.32E-04 |
| 12 | GO:0031977: thylakoid lumen | 9.55E-04 |
| 13 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.08E-03 |
| 14 | GO:0045298: tubulin complex | 1.38E-03 |
| 15 | GO:0005765: lysosomal membrane | 1.88E-03 |
| 16 | GO:0009706: chloroplast inner membrane | 1.93E-03 |
| 17 | GO:0030095: chloroplast photosystem II | 2.43E-03 |
| 18 | GO:0030076: light-harvesting complex | 2.63E-03 |
| 19 | GO:0042651: thylakoid membrane | 3.24E-03 |
| 20 | GO:0009579: thylakoid | 3.49E-03 |
| 21 | GO:0009522: photosystem I | 5.09E-03 |
| 22 | GO:0009523: photosystem II | 5.34E-03 |
| 23 | GO:0009707: chloroplast outer membrane | 8.68E-03 |
| 24 | GO:0005789: endoplasmic reticulum membrane | 1.17E-02 |
| 25 | GO:0010008: endosome membrane | 1.74E-02 |
| 26 | GO:0010287: plastoglobule | 2.19E-02 |
| 27 | GO:0005623: cell | 2.32E-02 |
| 28 | GO:0005886: plasma membrane | 2.83E-02 |
| 29 | GO:0046658: anchored component of plasma membrane | 3.50E-02 |
| 30 | GO:0005618: cell wall | 3.85E-02 |
| 31 | GO:0016020: membrane | 4.22E-02 |
| 32 | GO:0005874: microtubule | 4.45E-02 |
| 33 | GO:0031969: chloroplast membrane | 4.56E-02 |