gene detail

Gene description

TAIR ID: AT2G44920

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: -0.01

General responsiveness: 2.36

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

chloroplast thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast thylakoid lumen, thylakoid, thylakoid lumen

GO molecular function

protein binding

Protein domain

Pfam	PF00805, Pentapeptide repeats (8 copies)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT2G20180, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.57	2.65E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.79	5.56E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.64	1.66E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-3.10	5.87E-10
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-1.50	5.57E-06
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.61	9.26E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.24	6.94E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-3.01	1.36E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.88	1.17E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.68	5.33E-14
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.51	8.15E-14
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.97	4.95E-08
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.30	4.57E-08
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.14	2.31E-03
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.61	6.24E-07