co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G44920

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
2	GO:0006982: response to lipid hydroperoxide	0.00E+00
3	GO:0002184: cytoplasmic translational termination	0.00E+00
4	GO:0010335: response to non-ionic osmotic stress	0.00E+00
5	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
6	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
7	GO:0015717: triose phosphate transport	0.00E+00
8	GO:0005996: monosaccharide metabolic process	0.00E+00
9	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
10	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
11	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
12	GO:0015979: photosynthesis	2.00E-22
13	GO:0015995: chlorophyll biosynthetic process	1.25E-14
14	GO:0032544: plastid translation	3.38E-11
15	GO:0018298: protein-chromophore linkage	1.49E-09
16	GO:0009768: photosynthesis, light harvesting in photosystem I	9.22E-09
17	GO:0009773: photosynthetic electron transport in photosystem I	3.86E-08
18	GO:0010207: photosystem II assembly	1.25E-07
19	GO:0055114: oxidation-reduction process	1.92E-07
20	GO:0009658: chloroplast organization	7.34E-07
21	GO:0009735: response to cytokinin	1.11E-06
22	GO:0030388: fructose 1,6-bisphosphate metabolic process	8.09E-06
23	GO:1902326: positive regulation of chlorophyll biosynthetic process	8.09E-06
24	GO:0006636: unsaturated fatty acid biosynthetic process	9.51E-06
25	GO:0009645: response to low light intensity stimulus	1.27E-05
26	GO:0006000: fructose metabolic process	2.78E-05
27	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	6.06E-05
28	GO:0010114: response to red light	6.56E-05
29	GO:0006412: translation	8.26E-05
30	GO:0009765: photosynthesis, light harvesting	1.06E-04
31	GO:0015994: chlorophyll metabolic process	1.06E-04
32	GO:0010600: regulation of auxin biosynthetic process	1.06E-04
33	GO:0006094: gluconeogenesis	1.19E-04
34	GO:0019253: reductive pentose-phosphate cycle	1.43E-04
35	GO:0010218: response to far red light	2.77E-04
36	GO:0009854: oxidative photosynthetic carbon pathway	3.15E-04
37	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	3.15E-04
38	GO:0009637: response to blue light	3.48E-04
39	GO:0034599: cellular response to oxidative stress	3.73E-04
40	GO:0010196: nonphotochemical quenching	4.06E-04
41	GO:0065002: intracellular protein transmembrane transport	4.26E-04
42	GO:0071277: cellular response to calcium ion	4.26E-04
43	GO:0043087: regulation of GTPase activity	4.26E-04
44	GO:0071461: cellular response to redox state	4.26E-04
45	GO:0080093: regulation of photorespiration	4.26E-04
46	GO:0031998: regulation of fatty acid beta-oxidation	4.26E-04
47	GO:0034337: RNA folding	4.26E-04
48	GO:0019510: S-adenosylhomocysteine catabolic process	4.26E-04
49	GO:0046467: membrane lipid biosynthetic process	4.26E-04
50	GO:0043953: protein transport by the Tat complex	4.26E-04
51	GO:0051775: response to redox state	4.26E-04
52	GO:0048564: photosystem I assembly	5.08E-04
53	GO:0010928: regulation of auxin mediated signaling pathway	5.08E-04
54	GO:0009704: de-etiolation	5.08E-04
55	GO:0006810: transport	5.35E-04
56	GO:0006002: fructose 6-phosphate metabolic process	6.20E-04
57	GO:0071482: cellular response to light stimulus	6.20E-04
58	GO:0019252: starch biosynthetic process	6.92E-04
59	GO:0006783: heme biosynthetic process	7.43E-04
60	GO:0006754: ATP biosynthetic process	7.43E-04
61	GO:0006779: porphyrin-containing compound biosynthetic process	8.75E-04
62	GO:0008616: queuosine biosynthetic process	9.21E-04
63	GO:0006729: tetrahydrobiopterin biosynthetic process	9.21E-04
64	GO:0080005: photosystem stoichiometry adjustment	9.21E-04
65	GO:0033353: S-adenosylmethionine cycle	9.21E-04
66	GO:0042819: vitamin B6 biosynthetic process	9.21E-04
67	GO:0032259: methylation	1.07E-03
68	GO:0018119: peptidyl-cysteine S-nitrosylation	1.17E-03
69	GO:0009409: response to cold	1.24E-03
70	GO:0090391: granum assembly	1.50E-03
71	GO:0006518: peptide metabolic process	1.50E-03
72	GO:0035436: triose phosphate transmembrane transport	1.50E-03
73	GO:0044375: regulation of peroxisome size	1.50E-03
74	GO:0009767: photosynthetic electron transport chain	1.52E-03
75	GO:0005986: sucrose biosynthetic process	1.52E-03
76	GO:0006108: malate metabolic process	1.52E-03
77	GO:0042742: defense response to bacterium	1.71E-03
78	GO:0019762: glucosinolate catabolic process	2.14E-03
79	GO:0006020: inositol metabolic process	2.17E-03
80	GO:0071484: cellular response to light intensity	2.17E-03
81	GO:0009152: purine ribonucleotide biosynthetic process	2.17E-03
82	GO:0046653: tetrahydrofolate metabolic process	2.17E-03
83	GO:0006107: oxaloacetate metabolic process	2.17E-03
84	GO:0033014: tetrapyrrole biosynthetic process	2.17E-03
85	GO:0008615: pyridoxine biosynthetic process	2.17E-03
86	GO:0010731: protein glutathionylation	2.17E-03
87	GO:1901332: negative regulation of lateral root development	2.17E-03
88	GO:0042823: pyridoxal phosphate biosynthetic process	2.17E-03
89	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	2.17E-03
90	GO:2001141: regulation of RNA biosynthetic process	2.17E-03
91	GO:0009853: photorespiration	2.27E-03
92	GO:0006633: fatty acid biosynthetic process	2.80E-03
93	GO:0031408: oxylipin biosynthetic process	2.89E-03
94	GO:0015976: carbon utilization	2.91E-03
95	GO:0006109: regulation of carbohydrate metabolic process	2.91E-03
96	GO:0045727: positive regulation of translation	2.91E-03
97	GO:0006536: glutamate metabolic process	2.91E-03
98	GO:0006546: glycine catabolic process	2.91E-03
99	GO:0006021: inositol biosynthetic process	2.91E-03
100	GO:0006734: NADH metabolic process	2.91E-03
101	GO:0015713: phosphoglycerate transport	2.91E-03
102	GO:0010021: amylopectin biosynthetic process	2.91E-03
103	GO:0019748: secondary metabolic process	3.16E-03
104	GO:0009644: response to high light intensity	3.47E-03
105	GO:0043097: pyrimidine nucleoside salvage	3.73E-03
106	GO:0006097: glyoxylate cycle	3.73E-03
107	GO:0009107: lipoate biosynthetic process	3.73E-03
108	GO:0000304: response to singlet oxygen	3.73E-03
109	GO:0006656: phosphatidylcholine biosynthetic process	3.73E-03
110	GO:0042631: cellular response to water deprivation	4.40E-03
111	GO:0042549: photosystem II stabilization	4.61E-03
112	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	4.61E-03
113	GO:0006206: pyrimidine nucleobase metabolic process	4.61E-03
114	GO:0009643: photosynthetic acclimation	4.61E-03
115	GO:0050665: hydrogen peroxide biosynthetic process	4.61E-03
116	GO:0046855: inositol phosphate dephosphorylation	4.61E-03
117	GO:0006520: cellular amino acid metabolic process	4.74E-03
118	GO:0006662: glycerol ether metabolic process	4.74E-03
119	GO:1901259: chloroplast rRNA processing	5.57E-03
120	GO:0010189: vitamin E biosynthetic process	5.57E-03
121	GO:0042254: ribosome biogenesis	6.49E-03
122	GO:0010161: red light signaling pathway	6.58E-03
123	GO:0009772: photosynthetic electron transport in photosystem II	6.58E-03
124	GO:1900057: positive regulation of leaf senescence	6.58E-03
125	GO:0016559: peroxisome fission	7.65E-03
126	GO:0009642: response to light intensity	7.65E-03
127	GO:0010027: thylakoid membrane organization	8.49E-03
128	GO:0006526: arginine biosynthetic process	8.79E-03
129	GO:0009657: plastid organization	8.79E-03
130	GO:0010206: photosystem II repair	9.98E-03
131	GO:0090333: regulation of stomatal closure	9.98E-03
132	GO:0009817: defense response to fungus, incompatible interaction	1.11E-02
133	GO:0010205: photoinhibition	1.12E-02
134	GO:0005975: carbohydrate metabolic process	1.24E-02
135	GO:0043069: negative regulation of programmed cell death	1.25E-02
136	GO:0006535: cysteine biosynthetic process from serine	1.25E-02
137	GO:0006782: protoporphyrinogen IX biosynthetic process	1.25E-02
138	GO:0019684: photosynthesis, light reaction	1.39E-02
139	GO:0009698: phenylpropanoid metabolic process	1.39E-02
140	GO:0043085: positive regulation of catalytic activity	1.39E-02
141	GO:0006352: DNA-templated transcription, initiation	1.39E-02
142	GO:0000272: polysaccharide catabolic process	1.39E-02
143	GO:0006099: tricarboxylic acid cycle	1.48E-02
144	GO:0006790: sulfur compound metabolic process	1.53E-02
145	GO:0016925: protein sumoylation	1.53E-02
146	GO:0006807: nitrogen compound metabolic process	1.67E-02
147	GO:0018107: peptidyl-threonine phosphorylation	1.67E-02
148	GO:0009266: response to temperature stimulus	1.82E-02
149	GO:0046854: phosphatidylinositol phosphorylation	1.98E-02
150	GO:0007031: peroxisome organization	1.98E-02
151	GO:0005985: sucrose metabolic process	1.98E-02
152	GO:0009636: response to toxic substance	2.05E-02
153	GO:0019344: cysteine biosynthetic process	2.30E-02
154	GO:0000027: ribosomal large subunit assembly	2.30E-02
155	GO:0006364: rRNA processing	2.46E-02
156	GO:0009585: red, far-red light phototransduction	2.46E-02
157	GO:0061077: chaperone-mediated protein folding	2.64E-02
158	GO:0010017: red or far-red light signaling pathway	2.82E-02
159	GO:0016226: iron-sulfur cluster assembly	2.82E-02
160	GO:0030433: ubiquitin-dependent ERAD pathway	2.82E-02
161	GO:0006730: one-carbon metabolic process	2.82E-02
162	GO:0043086: negative regulation of catalytic activity	2.91E-02
163	GO:0009625: response to insect	3.00E-02
164	GO:0009693: ethylene biosynthetic process	3.00E-02
165	GO:0009306: protein secretion	3.18E-02
166	GO:0006606: protein import into nucleus	3.56E-02
167	GO:0006814: sodium ion transport	3.95E-02
168	GO:0009646: response to absence of light	3.95E-02
169	GO:0015986: ATP synthesis coupled proton transport	3.95E-02
170	GO:0045454: cell redox homeostasis	4.11E-02
171	GO:0009791: post-embryonic development	4.15E-02
172	GO:0000302: response to reactive oxygen species	4.36E-02
173	GO:0009058: biosynthetic process	4.61E-02
174	GO:0009567: double fertilization forming a zygote and endosperm	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0008465: glycerate dehydrogenase activity	0.00E+00
2	GO:0046408: chlorophyll synthetase activity	0.00E+00
3	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
4	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
5	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
6	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
7	GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	0.00E+00
8	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
9	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
10	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
11	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
12	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
13	GO:0045550: geranylgeranyl reductase activity	0.00E+00
14	GO:0090711: FMN hydrolase activity	0.00E+00
15	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
16	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
17	GO:0008974: phosphoribulokinase activity	0.00E+00
18	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
19	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
20	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
21	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
22	GO:0019843: rRNA binding	6.72E-11
23	GO:0016168: chlorophyll binding	5.98E-10
24	GO:0031409: pigment binding	4.47E-09
25	GO:0016851: magnesium chelatase activity	3.78E-07
26	GO:0016491: oxidoreductase activity	5.30E-06
27	GO:0042389: omega-3 fatty acid desaturase activity	8.09E-06
28	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	8.09E-06
29	GO:0018708: thiol S-methyltransferase activity	8.09E-06
30	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	8.09E-06
31	GO:0003735: structural constituent of ribosome	8.87E-06
32	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	2.69E-05
33	GO:0048038: quinone binding	7.54E-05
34	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.06E-04
35	GO:0009011: starch synthase activity	1.06E-04
36	GO:0043495: protein anchor	1.06E-04
37	GO:0005528: FK506 binding	2.29E-04
38	GO:0016615: malate dehydrogenase activity	2.34E-04
39	GO:0030060: L-malate dehydrogenase activity	3.15E-04
40	GO:0019899: enzyme binding	4.06E-04
41	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	4.26E-04
42	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	4.26E-04
43	GO:0030794: (S)-coclaurine-N-methyltransferase activity	4.26E-04
44	GO:0016776: phosphotransferase activity, phosphate group as acceptor	4.26E-04
45	GO:0004013: adenosylhomocysteinase activity	4.26E-04
46	GO:0080132: fatty acid alpha-hydroxylase activity	4.26E-04
47	GO:0004325: ferrochelatase activity	4.26E-04
48	GO:0008746: NAD(P)+ transhydrogenase activity	4.26E-04
49	GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity	4.26E-04
50	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.60E-04
51	GO:0008883: glutamyl-tRNA reductase activity	9.21E-04
52	GO:0047746: chlorophyllase activity	9.21E-04
53	GO:0010297: heteropolysaccharide binding	9.21E-04
54	GO:0009977: proton motive force dependent protein transmembrane transporter activity	9.21E-04
55	GO:0004047: aminomethyltransferase activity	9.21E-04
56	GO:0052832: inositol monophosphate 3-phosphatase activity	9.21E-04
57	GO:0033201: alpha-1,4-glucan synthase activity	9.21E-04
58	GO:0008479: queuine tRNA-ribosyltransferase activity	9.21E-04
59	GO:0016630: protochlorophyllide reductase activity	9.21E-04
60	GO:0008934: inositol monophosphate 1-phosphatase activity	9.21E-04
61	GO:0052833: inositol monophosphate 4-phosphatase activity	9.21E-04
62	GO:0000234: phosphoethanolamine N-methyltransferase activity	9.21E-04
63	GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity	9.21E-04
64	GO:0050017: L-3-cyanoalanine synthase activity	9.21E-04
65	GO:0030234: enzyme regulator activity	1.02E-03
66	GO:0042802: identical protein binding	1.07E-03
67	GO:0008168: methyltransferase activity	1.41E-03
68	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.50E-03
69	GO:0071917: triose-phosphate transmembrane transporter activity	1.50E-03
70	GO:0008864: formyltetrahydrofolate deformylase activity	1.50E-03
71	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.50E-03
72	GO:0019948: SUMO activating enzyme activity	1.50E-03
73	GO:0010277: chlorophyllide a oxygenase [overall] activity	1.50E-03
74	GO:0004373: glycogen (starch) synthase activity	1.50E-03
75	GO:0016992: lipoate synthase activity	1.50E-03
76	GO:0031072: heat shock protein binding	1.52E-03
77	GO:0004565: beta-galactosidase activity	1.52E-03
78	GO:0008266: poly(U) RNA binding	1.72E-03
79	GO:0043023: ribosomal large subunit binding	2.17E-03
80	GO:0004351: glutamate decarboxylase activity	2.17E-03
81	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	2.17E-03
82	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	2.17E-03
83	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	2.17E-03
84	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	2.17E-03
85	GO:0015120: phosphoglycerate transmembrane transporter activity	2.91E-03
86	GO:0001053: plastid sigma factor activity	2.91E-03
87	GO:0008453: alanine-glyoxylate transaminase activity	2.91E-03
88	GO:0016987: sigma factor activity	2.91E-03
89	GO:0008891: glycolate oxidase activity	2.91E-03
90	GO:0004185: serine-type carboxypeptidase activity	3.13E-03
91	GO:0022891: substrate-specific transmembrane transporter activity	3.45E-03
92	GO:0051537: 2 iron, 2 sulfur cluster binding	3.47E-03
93	GO:0003959: NADPH dehydrogenase activity	3.73E-03
94	GO:0051287: NAD binding	4.00E-03
95	GO:0047134: protein-disulfide reductase activity	4.06E-03
96	GO:0004332: fructose-bisphosphate aldolase activity	4.61E-03
97	GO:0004130: cytochrome-c peroxidase activity	4.61E-03
98	GO:0042578: phosphoric ester hydrolase activity	4.61E-03
99	GO:0009055: electron carrier activity	4.95E-03
100	GO:0004791: thioredoxin-disulfide reductase activity	5.10E-03
101	GO:0004124: cysteine synthase activity	5.57E-03
102	GO:0004849: uridine kinase activity	5.57E-03
103	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	5.57E-03
104	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	5.57E-03
105	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	6.67E-03
106	GO:0005515: protein binding	7.30E-03
107	GO:0004033: aldo-keto reductase (NADP) activity	7.65E-03
108	GO:0008135: translation factor activity, RNA binding	8.79E-03
109	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	9.98E-03
110	GO:0071949: FAD binding	9.98E-03
111	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.12E-02
112	GO:0004222: metalloendopeptidase activity	1.23E-02
113	GO:0008047: enzyme activator activity	1.25E-02
114	GO:0003746: translation elongation factor activity	1.41E-02
115	GO:0004089: carbonate dehydratase activity	1.67E-02
116	GO:0005315: inorganic phosphate transmembrane transporter activity	1.67E-02
117	GO:0004364: glutathione transferase activity	1.75E-02
118	GO:0043621: protein self-association	1.97E-02
119	GO:0051536: iron-sulfur cluster binding	2.30E-02
120	GO:0004857: enzyme inhibitor activity	2.30E-02
121	GO:0016787: hydrolase activity	2.54E-02
122	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.01E-02
123	GO:0016887: ATPase activity	3.02E-02
124	GO:0003727: single-stranded RNA binding	3.18E-02
125	GO:0008514: organic anion transmembrane transporter activity	3.18E-02
126	GO:0051082: unfolded protein binding	3.50E-02
127	GO:0015035: protein disulfide oxidoreductase activity	3.61E-02
128	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	3.75E-02
129	GO:0050662: coenzyme binding	3.95E-02
130	GO:0010181: FMN binding	3.95E-02
131	GO:0016762: xyloglucan:xyloglucosyl transferase activity	4.36E-02
132	GO:0030170: pyridoxal phosphate binding	4.85E-02