Gene: AT2G42360
     

Gene description


TAIR ID: AT2G42360

Short description: RING/U-box superfamily protein

Pathogen responsiveness: 2.12

General responsiveness: -1.87

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G428179  

Wheat: No orthologous gene

GO biological process


protein ubiquitination


GO cellular component


integral component of membrane, nucleus


GO molecular function


ubiquitin-protein transferase activity, metal ion binding


Protein domain


PfamPF13639, Ring finger domain
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G24050, AT4G16110, AT2G20180, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 23 (Top10%)

click to view PPI network

Differentially expressed condition


81 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, ERF104 ox, water 4 hCol, ERF104 ox, Flg22 4 h2.274.30E-02
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h3.601.19E-03
GSE11807Col, mpk6 ko, water 4 hCol, mpk6 ko, Flg22 4 h2.652.18E-02
GSE12856Col, WT, controlCol, WT, Bg h1.771.85E-04
GSE12856Col, ataf1, controlCol, ataf1, Bg h3.642.16E-07
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d2.111.31E-16
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d1.842.51E-14
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 30 min3.449.49E-03
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 60min3.121.42E-02
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 30 min2.152.25E-02
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 60min3.701.02E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-3.101.32E-11
GSE17464Laer, controlLaer, PstDC3000 12 h-1.821.76E-05
GSE17464Laer, controlLaer, Flg22 2 h1.773.47E-05
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-2.451.68E-08
GSE17464Penta, controlPenta, PstDC3000 12 h-1.713.81E-05
GSE17464Penta, controlPenta, Flg22 2 h1.705.82E-05
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h1.531.70E-02
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.649.12E-03
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.571.35E-02
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h2.096.49E-12
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h2.308.93E-13
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h2.231.51E-12
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.921.75E-03
GSE20278Col, RPL18-HF, control, polysomal RNACol, RPL18-HF, TuMV 10 d, polysomal RNA1.734.17E-03
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d1.862.09E-03
GSE2169Col, WT, waterCol, WT, chitin 30 min1.742.88E-08
GSE2169Col, rre1, waterCol, rre1, chitin 30 min1.502.22E-07
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min1.531.27E-06
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d2.496.14E-05
GSE37269St0, WT, controlSt0, WT, TEV 21 d1.941.42E-03
GSE37921Col, WT, controlCol, WT, CMV1.897.58E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt22.047.57E-06
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.007.46E-06
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.832.25E-07
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.925.66E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.621.52E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.995.76E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h4.501.59E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h4.412.45E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h4.233.12E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h4.721.34E-12
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h4.821.52E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h5.872.29E-14
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h4.731.82E-12
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h2.471.80E-02
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h3.841.92E-04
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h2.652.17E-08
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h3.852.05E-11
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h2.751.24E-08
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h4.413.06E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.802.69E-03
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h2.225.59E-03
GSE5520Col, WT, control 7 hCol, WT, E.coli_0157_H7 7 h1.652.75E-02
GSE5520Col, WT, control 7 hCol, WT, E.coli_TUV86 flic- 7 h1.875.93E-03
GSE5520Col, WT, control 7 hCol, WT, hrpA- 10 h2.062.47E-03
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h1.812.66E-05
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h2.175.44E-07
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h1.502.42E-04
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h1.527.20E-04
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h1.731.17E-04
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h1.865.11E-05
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h2.029.97E-06
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h1.931.60E-05
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h2.204.88E-07
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h1.784.67E-05
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h2.121.63E-05
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h3.947.49E-11
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h4.211.32E-11
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h1.685.47E-06
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h1.983.50E-07
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h2.172.88E-05
GSE6556Col, WT, controlCol, WT, PstDC3000 AvrRpt2 48 h1.973.20E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h3.498.88E-06
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min1.671.67E-11
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h4.012.73E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h1.611.85E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min3.719.30E-05
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h3.381.17E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.551.60E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min2.951.30E-04






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