co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G42360

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010324: membrane invagination	0.00E+00
2	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
3	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
4	GO:0010273: detoxification of copper ion	0.00E+00
5	GO:0097237: cellular response to toxic substance	0.00E+00
6	GO:0015690: aluminum cation transport	0.00E+00
7	GO:0002376: immune system process	0.00E+00
8	GO:0006979: response to oxidative stress	8.39E-08
9	GO:0006952: defense response	3.54E-07
10	GO:0009611: response to wounding	1.68E-06
11	GO:0019725: cellular homeostasis	4.35E-06
12	GO:0010186: positive regulation of cellular defense response	1.55E-05
13	GO:0010112: regulation of systemic acquired resistance	1.70E-05
14	GO:0080167: response to karrikin	2.82E-05
15	GO:1903507: negative regulation of nucleic acid-templated transcription	3.80E-05
16	GO:0060548: negative regulation of cell death	6.18E-05
17	GO:0009164: nucleoside catabolic process	9.74E-05
18	GO:0009643: photosynthetic acclimation	1.41E-04
19	GO:0006468: protein phosphorylation	1.59E-04
20	GO:0071456: cellular response to hypoxia	1.78E-04
21	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.78E-04
22	GO:0051707: response to other organism	2.43E-04
23	GO:0042391: regulation of membrane potential	2.82E-04
24	GO:0048508: embryonic meristem development	3.09E-04
25	GO:0015760: glucose-6-phosphate transport	3.09E-04
26	GO:0080173: male-female gamete recognition during double fertilization	3.09E-04
27	GO:0033306: phytol metabolic process	3.09E-04
28	GO:0009700: indole phytoalexin biosynthetic process	3.09E-04
29	GO:0034214: protein hexamerization	3.09E-04
30	GO:0009270: response to humidity	3.09E-04
31	GO:0030091: protein repair	3.17E-04
32	GO:0031347: regulation of defense response	3.33E-04
33	GO:0009646: response to absence of light	3.43E-04
34	GO:0010120: camalexin biosynthetic process	3.89E-04
35	GO:0006098: pentose-phosphate shunt	4.68E-04
36	GO:0009753: response to jasmonic acid	5.18E-04
37	GO:0042742: defense response to bacterium	5.35E-04
38	GO:0009626: plant-type hypersensitive response	5.67E-04
39	GO:0015914: phospholipid transport	6.76E-04
40	GO:0009838: abscission	6.76E-04
41	GO:0015802: basic amino acid transport	6.76E-04
42	GO:0006527: arginine catabolic process	6.76E-04
43	GO:0080181: lateral root branching	6.76E-04
44	GO:0019521: D-gluconate metabolic process	6.76E-04
45	GO:0044419: interspecies interaction between organisms	6.76E-04
46	GO:0009945: radial axis specification	6.76E-04
47	GO:0015712: hexose phosphate transport	6.76E-04
48	GO:0051258: protein polymerization	6.76E-04
49	GO:0019441: tryptophan catabolic process to kynurenine	6.76E-04
50	GO:0009446: putrescine biosynthetic process	6.76E-04
51	GO:0050832: defense response to fungus	9.85E-04
52	GO:0009266: response to temperature stimulus	1.08E-03
53	GO:0045793: positive regulation of cell size	1.10E-03
54	GO:0015695: organic cation transport	1.10E-03
55	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	1.10E-03
56	GO:0015714: phosphoenolpyruvate transport	1.10E-03
57	GO:1900055: regulation of leaf senescence	1.10E-03
58	GO:0006954: inflammatory response	1.10E-03
59	GO:0035436: triose phosphate transmembrane transport	1.10E-03
60	GO:0009867: jasmonic acid mediated signaling pathway	1.24E-03
61	GO:2000377: regulation of reactive oxygen species metabolic process	1.49E-03
62	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.57E-03
63	GO:0048194: Golgi vesicle budding	1.57E-03
64	GO:0015696: ammonium transport	1.57E-03
65	GO:0051289: protein homotetramerization	1.57E-03
66	GO:0001676: long-chain fatty acid metabolic process	1.57E-03
67	GO:0055114: oxidation-reduction process	1.60E-03
68	GO:0009695: jasmonic acid biosynthetic process	1.64E-03
69	GO:0009617: response to bacterium	2.04E-03
70	GO:1901141: regulation of lignin biosynthetic process	2.11E-03
71	GO:0010109: regulation of photosynthesis	2.11E-03
72	GO:0048638: regulation of developmental growth	2.11E-03
73	GO:0009652: thigmotropism	2.11E-03
74	GO:0072488: ammonium transmembrane transport	2.11E-03
75	GO:0015713: phosphoglycerate transport	2.11E-03
76	GO:0008295: spermidine biosynthetic process	2.11E-03
77	GO:0034440: lipid oxidation	2.11E-03
78	GO:0009625: response to insect	2.15E-03
79	GO:0009809: lignin biosynthetic process	2.49E-03
80	GO:0034052: positive regulation of plant-type hypersensitive response	2.69E-03
81	GO:0000304: response to singlet oxygen	2.69E-03
82	GO:0009737: response to abscisic acid	3.27E-03
83	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	3.32E-03
84	GO:0006596: polyamine biosynthetic process	3.32E-03
85	GO:0009117: nucleotide metabolic process	3.32E-03
86	GO:0006574: valine catabolic process	3.32E-03
87	GO:0009759: indole glucosinolate biosynthetic process	3.32E-03
88	GO:0006623: protein targeting to vacuole	3.39E-03
89	GO:0010193: response to ozone	3.63E-03
90	GO:0080086: stamen filament development	4.00E-03
91	GO:0042372: phylloquinone biosynthetic process	4.00E-03
92	GO:0009094: L-phenylalanine biosynthetic process	4.00E-03
93	GO:0009612: response to mechanical stimulus	4.00E-03
94	GO:0009942: longitudinal axis specification	4.00E-03
95	GO:0010200: response to chitin	4.43E-03
96	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.72E-03
97	GO:0043090: amino acid import	4.72E-03
98	GO:0071446: cellular response to salicylic acid stimulus	4.72E-03
99	GO:1900056: negative regulation of leaf senescence	4.72E-03
100	GO:0050829: defense response to Gram-negative bacterium	4.72E-03
101	GO:1902074: response to salt	4.72E-03
102	GO:0009787: regulation of abscisic acid-activated signaling pathway	5.48E-03
103	GO:0009819: drought recovery	5.48E-03
104	GO:2000031: regulation of salicylic acid mediated signaling pathway	6.28E-03
105	GO:0009699: phenylpropanoid biosynthetic process	6.28E-03
106	GO:0010204: defense response signaling pathway, resistance gene-independent	6.28E-03
107	GO:0030968: endoplasmic reticulum unfolded protein response	6.28E-03
108	GO:0009835: fruit ripening	7.12E-03
109	GO:0019432: triglyceride biosynthetic process	7.12E-03
110	GO:0046916: cellular transition metal ion homeostasis	7.12E-03
111	GO:0009813: flavonoid biosynthetic process	7.20E-03
112	GO:0009407: toxin catabolic process	7.56E-03
113	GO:0010150: leaf senescence	7.85E-03
114	GO:0007568: aging	7.93E-03
115	GO:0090332: stomatal closure	8.01E-03
116	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	8.01E-03
117	GO:0043069: negative regulation of programmed cell death	8.92E-03
118	GO:0019538: protein metabolic process	8.92E-03
119	GO:0009870: defense response signaling pathway, resistance gene-dependent	8.92E-03
120	GO:0006032: chitin catabolic process	8.92E-03
121	GO:0007166: cell surface receptor signaling pathway	9.31E-03
122	GO:0072593: reactive oxygen species metabolic process	9.88E-03
123	GO:0048229: gametophyte development	9.88E-03
124	GO:0006897: endocytosis	1.03E-02
125	GO:0006790: sulfur compound metabolic process	1.09E-02
126	GO:0012501: programmed cell death	1.09E-02
127	GO:0002213: defense response to insect	1.09E-02
128	GO:2000012: regulation of auxin polar transport	1.19E-02
129	GO:0009636: response to toxic substance	1.26E-02
130	GO:0046854: phosphatidylinositol phosphorylation	1.40E-02
131	GO:0042343: indole glucosinolate metabolic process	1.40E-02
132	GO:0009901: anther dehiscence	1.40E-02
133	GO:0046688: response to copper ion	1.40E-02
134	GO:0009414: response to water deprivation	1.68E-02
135	GO:0006825: copper ion transport	1.75E-02
136	GO:0006874: cellular calcium ion homeostasis	1.75E-02
137	GO:0009555: pollen development	1.81E-02
138	GO:0098542: defense response to other organism	1.87E-02
139	GO:0031408: oxylipin biosynthetic process	1.87E-02
140	GO:0003333: amino acid transmembrane transport	1.87E-02
141	GO:0016998: cell wall macromolecule catabolic process	1.87E-02
142	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.88E-02
143	GO:0009620: response to fungus	1.98E-02
144	GO:0006012: galactose metabolic process	2.12E-02
145	GO:0009693: ethylene biosynthetic process	2.12E-02
146	GO:0040007: growth	2.12E-02
147	GO:0070417: cellular response to cold	2.39E-02
148	GO:0008284: positive regulation of cell proliferation	2.39E-02
149	GO:0048653: anther development	2.52E-02
150	GO:0042631: cellular response to water deprivation	2.52E-02
151	GO:0000271: polysaccharide biosynthetic process	2.52E-02
152	GO:0000413: protein peptidyl-prolyl isomerization	2.52E-02
153	GO:0045489: pectin biosynthetic process	2.66E-02
154	GO:0006885: regulation of pH	2.66E-02
155	GO:0006520: cellular amino acid metabolic process	2.66E-02
156	GO:0009409: response to cold	2.92E-02
157	GO:0009408: response to heat	2.93E-02
158	GO:0009749: response to glucose	2.95E-02
159	GO:0000302: response to reactive oxygen species	3.09E-02
160	GO:0006635: fatty acid beta-oxidation	3.09E-02
161	GO:0009790: embryo development	3.16E-02
162	GO:0016310: phosphorylation	3.16E-02
163	GO:0019761: glucosinolate biosynthetic process	3.24E-02
164	GO:0008152: metabolic process	3.31E-02
165	GO:1901657: glycosyl compound metabolic process	3.39E-02
166	GO:0006904: vesicle docking involved in exocytosis	3.70E-02
167	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.18E-02
168	GO:0006470: protein dephosphorylation	4.27E-02
169	GO:0009627: systemic acquired resistance	4.35E-02
170	GO:0006950: response to stress	4.51E-02
171	GO:0016311: dephosphorylation	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0047681: aryl-alcohol dehydrogenase (NADP+) activity	0.00E+00
2	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
3	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
4	GO:0016301: kinase activity	3.65E-05
5	GO:0004674: protein serine/threonine kinase activity	6.86E-05
6	GO:0030552: cAMP binding	8.48E-05
7	GO:0030553: cGMP binding	8.48E-05
8	GO:0003714: transcription corepressor activity	1.17E-04
9	GO:0005216: ion channel activity	1.36E-04
10	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.93E-04
11	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	1.93E-04
12	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.93E-04
13	GO:0005524: ATP binding	2.66E-04
14	GO:0005249: voltage-gated potassium channel activity	2.82E-04
15	GO:0030551: cyclic nucleotide binding	2.82E-04
16	GO:2001227: quercitrin binding	3.09E-04
17	GO:0000386: second spliceosomal transesterification activity	3.09E-04
18	GO:0019707: protein-cysteine S-acyltransferase activity	3.09E-04
19	GO:2001147: camalexin binding	3.09E-04
20	GO:0008792: arginine decarboxylase activity	3.09E-04
21	GO:0005544: calcium-dependent phospholipid binding	3.17E-04
22	GO:0019901: protein kinase binding	3.77E-04
23	GO:0008171: O-methyltransferase activity	6.45E-04
24	GO:0047364: desulfoglucosinolate sulfotransferase activity	6.76E-04
25	GO:0015152: glucose-6-phosphate transmembrane transporter activity	6.76E-04
26	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	6.76E-04
27	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	6.76E-04
28	GO:0004061: arylformamidase activity	6.76E-04
29	GO:0004385: guanylate kinase activity	6.76E-04
30	GO:0050660: flavin adenine dinucleotide binding	8.42E-04
31	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.61E-04
32	GO:0071917: triose-phosphate transmembrane transporter activity	1.10E-03
33	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	1.10E-03
34	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	1.10E-03
35	GO:0042409: caffeoyl-CoA O-methyltransferase activity	1.10E-03
36	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.10E-03
37	GO:0016165: linoleate 13S-lipoxygenase activity	1.10E-03
38	GO:0015120: phosphoglycerate transmembrane transporter activity	2.11E-03
39	GO:0047769: arogenate dehydratase activity	2.11E-03
40	GO:0004664: prephenate dehydratase activity	2.11E-03
41	GO:0003995: acyl-CoA dehydrogenase activity	2.11E-03
42	GO:0009916: alternative oxidase activity	2.11E-03
43	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.33E-03
44	GO:0003997: acyl-CoA oxidase activity	2.69E-03
45	GO:0005496: steroid binding	2.69E-03
46	GO:0047631: ADP-ribose diphosphatase activity	2.69E-03
47	GO:0008519: ammonium transmembrane transporter activity	3.32E-03
48	GO:0000210: NAD+ diphosphatase activity	3.32E-03
49	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	4.00E-03
50	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	4.00E-03
51	GO:0003950: NAD+ ADP-ribosyltransferase activity	4.00E-03
52	GO:0004012: phospholipid-translocating ATPase activity	4.00E-03
53	GO:0005261: cation channel activity	4.00E-03
54	GO:0004144: diacylglycerol O-acyltransferase activity	4.00E-03
55	GO:0004497: monooxygenase activity	4.21E-03
56	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.67E-03
57	GO:0043295: glutathione binding	4.72E-03
58	GO:0005509: calcium ion binding	4.84E-03
59	GO:0051213: dioxygenase activity	5.25E-03
60	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.48E-03
61	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	5.48E-03
62	GO:0004034: aldose 1-epimerase activity	5.48E-03
63	GO:0004033: aldo-keto reductase (NADP) activity	5.48E-03
64	GO:0052747: sinapyl alcohol dehydrogenase activity	5.48E-03
65	GO:0004721: phosphoprotein phosphatase activity	6.18E-03
66	GO:0046872: metal ion binding	6.36E-03
67	GO:0004722: protein serine/threonine phosphatase activity	6.37E-03
68	GO:0016207: 4-coumarate-CoA ligase activity	7.12E-03
69	GO:0071949: FAD binding	7.12E-03
70	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	7.93E-03
71	GO:0047617: acyl-CoA hydrolase activity	8.01E-03
72	GO:0004568: chitinase activity	8.92E-03
73	GO:0015020: glucuronosyltransferase activity	8.92E-03
74	GO:0050661: NADP binding	9.92E-03
75	GO:0004364: glutathione transferase activity	1.08E-02
76	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.09E-02
77	GO:0005388: calcium-transporting ATPase activity	1.19E-02
78	GO:0005315: inorganic phosphate transmembrane transporter activity	1.19E-02
79	GO:0004672: protein kinase activity	1.20E-02
80	GO:0015293: symporter activity	1.26E-02
81	GO:0004190: aspartic-type endopeptidase activity	1.40E-02
82	GO:0008146: sulfotransferase activity	1.40E-02
83	GO:0005217: intracellular ligand-gated ion channel activity	1.40E-02
84	GO:0004970: ionotropic glutamate receptor activity	1.40E-02
85	GO:0043531: ADP binding	1.54E-02
86	GO:0015171: amino acid transmembrane transporter activity	1.68E-02
87	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.87E-02
88	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.00E-02
89	GO:0003727: single-stranded RNA binding	2.25E-02
90	GO:0016787: hydrolase activity	2.46E-02
91	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.49E-02
92	GO:0005451: monovalent cation:proton antiporter activity	2.52E-02
93	GO:0016758: transferase activity, transferring hexosyl groups	2.64E-02
94	GO:0016853: isomerase activity	2.80E-02
95	GO:0015299: solute:proton antiporter activity	2.80E-02
96	GO:0030246: carbohydrate binding	2.81E-02
97	GO:0030170: pyridoxal phosphate binding	3.01E-02
98	GO:0005507: copper ion binding	3.05E-02
99	GO:0009055: electron carrier activity	3.20E-02
100	GO:0015385: sodium:proton antiporter activity	3.39E-02
101	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.49E-02
102	GO:0016791: phosphatase activity	3.55E-02
103	GO:0008483: transaminase activity	3.70E-02
104	GO:0016597: amino acid binding	3.86E-02
105	GO:0008194: UDP-glycosyltransferase activity	4.18E-02
106	GO:0102483: scopolin beta-glucosidase activity	4.51E-02
107	GO:0004806: triglyceride lipase activity	4.51E-02
108	GO:0030247: polysaccharide binding	4.51E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005886: plasma membrane	2.47E-12
3	GO:0005901: caveola	4.35E-06
4	GO:0000138: Golgi trans cisterna	3.09E-04
5	GO:0016021: integral component of membrane	3.53E-04
6	GO:0008287: protein serine/threonine phosphatase complex	1.10E-03
7	GO:0070062: extracellular exosome	1.57E-03
8	GO:0005777: peroxisome	1.85E-03
9	GO:0032586: protein storage vacuole membrane	2.11E-03
10	GO:0005887: integral component of plasma membrane	3.22E-03
11	GO:0016363: nuclear matrix	4.00E-03
12	GO:0000326: protein storage vacuole	6.28E-03
13	GO:0030125: clathrin vesicle coat	8.92E-03
14	GO:0005737: cytoplasm	1.22E-02
15	GO:0005769: early endosome	1.52E-02
16	GO:0070469: respiratory chain	1.75E-02
17	GO:0005905: clathrin-coated pit	1.87E-02
18	GO:0009506: plasmodesma	2.58E-02
19	GO:0005770: late endosome	2.66E-02
20	GO:0031965: nuclear membrane	2.95E-02
21	GO:0000145: exocyst	3.24E-02
22	GO:0043231: intracellular membrane-bounded organelle	3.31E-02
23	GO:0000151: ubiquitin ligase complex	4.85E-02