co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G42360

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006793: phosphorus metabolic process	0.00E+00
2	GO:0009688: abscisic acid biosynthetic process	4.23E-05
3	GO:0051938: L-glutamate import	4.74E-05
4	GO:0010421: hydrogen peroxide-mediated programmed cell death	4.74E-05
5	GO:0044419: interspecies interaction between organisms	1.17E-04
6	GO:0043091: L-arginine import	1.17E-04
7	GO:0051592: response to calcium ion	1.17E-04
8	GO:0015802: basic amino acid transport	1.17E-04
9	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	1.17E-04
10	GO:0003333: amino acid transmembrane transport	1.42E-04
11	GO:0010351: lithium ion transport	2.00E-04
12	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	2.00E-04
13	GO:0006882: cellular zinc ion homeostasis	2.94E-04
14	GO:0045017: glycerolipid biosynthetic process	2.94E-04
15	GO:0045227: capsule polysaccharide biosynthetic process	3.94E-04
16	GO:0033358: UDP-L-arabinose biosynthetic process	3.94E-04
17	GO:0034052: positive regulation of plant-type hypersensitive response	5.00E-04
18	GO:0000304: response to singlet oxygen	5.00E-04
19	GO:0010225: response to UV-C	5.00E-04
20	GO:0009817: defense response to fungus, incompatible interaction	5.59E-04
21	GO:0006561: proline biosynthetic process	6.13E-04
22	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	6.13E-04
23	GO:0010256: endomembrane system organization	6.13E-04
24	GO:0009407: toxin catabolic process	6.14E-04
25	GO:0019745: pentacyclic triterpenoid biosynthetic process	8.54E-04
26	GO:0030026: cellular manganese ion homeostasis	8.54E-04
27	GO:1900056: negative regulation of leaf senescence	8.54E-04
28	GO:0009061: anaerobic respiration	9.81E-04
29	GO:0009636: response to toxic substance	9.98E-04
30	GO:0010120: camalexin biosynthetic process	1.11E-03
31	GO:0010112: regulation of systemic acquired resistance	1.25E-03
32	GO:0055062: phosphate ion homeostasis	1.55E-03
33	GO:0010162: seed dormancy process	1.55E-03
34	GO:0012501: programmed cell death	1.86E-03
35	GO:0009718: anthocyanin-containing compound biosynthetic process	2.03E-03
36	GO:0002237: response to molecule of bacterial origin	2.20E-03
37	GO:0009969: xyloglucan biosynthetic process	2.38E-03
38	GO:0009225: nucleotide-sugar metabolic process	2.38E-03
39	GO:0030150: protein import into mitochondrial matrix	2.74E-03
40	GO:0005992: trehalose biosynthetic process	2.74E-03
41	GO:0010150: leaf senescence	2.85E-03
42	GO:0006874: cellular calcium ion homeostasis	2.93E-03
43	GO:0071456: cellular response to hypoxia	3.32E-03
44	GO:0006012: galactose metabolic process	3.52E-03
45	GO:0006814: sodium ion transport	4.59E-03
46	GO:0042752: regulation of circadian rhythm	4.59E-03
47	GO:0009851: auxin biosynthetic process	4.81E-03
48	GO:0042742: defense response to bacterium	5.60E-03
49	GO:0010200: response to chitin	5.61E-03
50	GO:0009615: response to virus	6.50E-03
51	GO:0006468: protein phosphorylation	6.59E-03
52	GO:0009627: systemic acquired resistance	7.01E-03
53	GO:0015031: protein transport	7.59E-03
54	GO:0008219: cell death	7.81E-03
55	GO:0009751: response to salicylic acid	7.88E-03
56	GO:0009832: plant-type cell wall biogenesis	8.09E-03
57	GO:0006865: amino acid transport	8.93E-03
58	GO:0006099: tricarboxylic acid cycle	9.51E-03
59	GO:0042542: response to hydrogen peroxide	1.07E-02
60	GO:0031347: regulation of defense response	1.26E-02
61	GO:0006812: cation transport	1.29E-02
62	GO:0009664: plant-type cell wall organization	1.29E-02
63	GO:0042538: hyperosmotic salinity response	1.29E-02
64	GO:0006486: protein glycosylation	1.36E-02
65	GO:0009737: response to abscisic acid	1.46E-02
66	GO:0009626: plant-type hypersensitive response	1.60E-02
67	GO:0009620: response to fungus	1.64E-02
68	GO:0009624: response to nematode	1.75E-02
69	GO:0009739: response to gibberellin	2.79E-02
70	GO:0006979: response to oxidative stress	2.91E-02
71	GO:0009617: response to bacterium	2.92E-02
72	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.19E-02
73	GO:0006869: lipid transport	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.18E-05
2	GO:0031127: alpha-(1,2)-fucosyltransferase activity	4.74E-05
3	GO:0050660: flavin adenine dinucleotide binding	5.99E-05
4	GO:0009055: electron carrier activity	1.55E-04
5	GO:0015181: arginine transmembrane transporter activity	2.94E-04
6	GO:0042299: lupeol synthase activity	2.94E-04
7	GO:0015189: L-lysine transmembrane transporter activity	2.94E-04
8	GO:0005313: L-glutamate transmembrane transporter activity	3.94E-04
9	GO:0016866: intramolecular transferase activity	3.94E-04
10	GO:0004031: aldehyde oxidase activity	3.94E-04
11	GO:0050302: indole-3-acetaldehyde oxidase activity	3.94E-04
12	GO:0015368: calcium:cation antiporter activity	3.94E-04
13	GO:0050373: UDP-arabinose 4-epimerase activity	3.94E-04
14	GO:0015369: calcium:proton antiporter activity	3.94E-04
15	GO:0000104: succinate dehydrogenase activity	5.00E-04
16	GO:0008177: succinate dehydrogenase (ubiquinone) activity	5.00E-04
17	GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity	5.00E-04
18	GO:0004556: alpha-amylase activity	6.13E-04
19	GO:0003978: UDP-glucose 4-epimerase activity	7.31E-04
20	GO:0004144: diacylglycerol O-acyltransferase activity	7.31E-04
21	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	8.54E-04
22	GO:0004364: glutathione transferase activity	8.60E-04
23	GO:0015491: cation:cation antiporter activity	9.81E-04
24	GO:0008417: fucosyltransferase activity	1.25E-03
25	GO:0015171: amino acid transmembrane transporter activity	1.31E-03
26	GO:0015174: basic amino acid transmembrane transporter activity	1.40E-03
27	GO:0045309: protein phosphorylated amino acid binding	1.40E-03
28	GO:0019904: protein domain specific binding	1.70E-03
29	GO:0015266: protein channel activity	2.03E-03
30	GO:0004674: protein serine/threonine kinase activity	2.99E-03
31	GO:0005199: structural constituent of cell wall	4.37E-03
32	GO:0004197: cysteine-type endopeptidase activity	5.28E-03
33	GO:0052689: carboxylic ester hydrolase activity	5.99E-03
34	GO:0005524: ATP binding	6.02E-03
35	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	7.54E-03
36	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	7.81E-03
37	GO:0050897: cobalt ion binding	8.65E-03
38	GO:0051537: 2 iron, 2 sulfur cluster binding	1.16E-02
39	GO:0016887: ATPase activity	1.24E-02
40	GO:0016298: lipase activity	1.39E-02
41	GO:0005509: calcium ion binding	2.66E-02
42	GO:0008194: UDP-glycosyltransferase activity	2.79E-02
43	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.05E-02
44	GO:0008168: methyltransferase activity	3.42E-02
45	GO:0004672: protein kinase activity	4.23E-02
46	GO:0042803: protein homodimerization activity	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0009530: primary cell wall	2.00E-04
2	GO:0032580: Golgi cisterna membrane	3.63E-04
3	GO:0031305: integral component of mitochondrial inner membrane	9.81E-04
4	GO:0045273: respiratory chain complex II	9.81E-04
5	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	9.81E-04
6	GO:0016021: integral component of membrane	1.38E-03
7	GO:0009705: plant-type vacuole membrane	2.85E-03
8	GO:0005794: Golgi apparatus	3.05E-03
9	GO:0005744: mitochondrial inner membrane presequence translocase complex	3.73E-03
10	GO:0005886: plasma membrane	3.75E-03
11	GO:0005635: nuclear envelope	1.43E-02
12	GO:0005615: extracellular space	2.79E-02
13	GO:0005618: cell wall	3.19E-02