Gene: AT2G25900
     

Gene description


TAIR ID: AT2G25900

Short description: Zinc finger C-x8-C-x5-C-x3-H type family protein

Pathogen responsiveness: 0.60

General responsiveness: 0.79

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat:

TAAFFX.11213.1.S1_S_AT  


GO biological process


mRNA destabilization, regulation of transcription, DNA-templated


GO cellular component


cytoplasm, nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, metal ion binding


Protein domain


PfamPF00642, Zinc finger C-x8-C-x5-C-x3-H type (and similar)
SMARTSM00356, ZnF_C3H1

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


32 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h-1.631.67E-03
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h-1.641.78E-03
GSE17464Laer, controlLaer, Flg22 1 h-2.172.44E-02
GSE17464Laer, controlLaer, Flg22 2 h-2.052.96E-02
GSE17464Penta, controlPenta, Flg22 2 h-2.271.87E-02
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.682.72E-03
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.251.92E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.534.84E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-4.146.37E-08
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.861.35E-05
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-1.762.80E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h-3.351.27E-13
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h-2.777.80E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.801.18E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.752.51E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.886.90E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.588.34E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.771.31E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.967.39E-12
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.941.14E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-3.661.21E-13
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-2.121.47E-09
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.254.19E-05
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h1.631.77E-03
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.214.37E-05
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.285.63E-03
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.894.15E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.837.01E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.891.49E-03
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 AvrRpm1 4 h-1.661.08E-04
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-2.091.68E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min-2.352.89E-02






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