Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G25900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1902395: regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity0.00E+00
2GO:0010243: response to organonitrogen compound0.00E+00
3GO:0015970: guanosine tetraphosphate biosynthetic process0.00E+00
4GO:0050801: ion homeostasis5.43E-06
5GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway5.43E-06
6GO:0009723: response to ethylene1.24E-05
7GO:0043496: regulation of protein homodimerization activity1.49E-05
8GO:0042754: negative regulation of circadian rhythm1.49E-05
9GO:0071712: ER-associated misfolded protein catabolic process1.49E-05
10GO:0032527: protein exit from endoplasmic reticulum1.49E-05
11GO:0010447: response to acidic pH2.75E-05
12GO:0032940: secretion by cell2.75E-05
13GO:0015846: polyamine transport5.99E-05
14GO:0010023: proanthocyanidin biosynthetic process5.99E-05
15GO:0045893: positive regulation of transcription, DNA-templated7.87E-05
16GO:0010189: vitamin E biosynthetic process1.22E-04
17GO:2000067: regulation of root morphogenesis1.22E-04
18GO:1900056: negative regulation of leaf senescence1.46E-04
19GO:0070413: trehalose metabolism in response to stress1.70E-04
20GO:0048574: long-day photoperiodism, flowering1.96E-04
21GO:0009739: response to gibberellin2.37E-04
22GO:0010380: regulation of chlorophyll biosynthetic process2.49E-04
23GO:0009641: shade avoidance2.77E-04
24GO:0018107: peptidyl-threonine phosphorylation3.65E-04
25GO:0009718: anthocyanin-containing compound biosynthetic process3.65E-04
26GO:0010223: secondary shoot formation3.96E-04
27GO:0010039: response to iron ion4.26E-04
28GO:0009737: response to abscisic acid4.81E-04
29GO:0005992: trehalose biosynthetic process4.90E-04
30GO:0003333: amino acid transmembrane transport5.55E-04
31GO:0061077: chaperone-mediated protein folding5.55E-04
32GO:0032259: methylation5.68E-04
33GO:0016310: phosphorylation5.74E-04
34GO:0009751: response to salicylic acid5.84E-04
35GO:0009753: response to jasmonic acid6.33E-04
36GO:0008654: phospholipid biosynthetic process8.38E-04
37GO:0055072: iron ion homeostasis8.38E-04
38GO:0009651: response to salt stress8.45E-04
39GO:0009910: negative regulation of flower development1.44E-03
40GO:0009644: response to high light intensity1.91E-03
41GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.06E-03
42GO:0018105: peptidyl-serine phosphorylation2.86E-03
43GO:0046686: response to cadmium ion3.11E-03
44GO:0007623: circadian rhythm4.06E-03
45GO:0010150: leaf senescence4.06E-03
46GO:0010468: regulation of gene expression4.58E-03
47GO:0009658: chloroplast organization5.48E-03
48GO:0009860: pollen tube growth5.77E-03
49GO:0080167: response to karrikin6.35E-03
50GO:0015979: photosynthesis6.96E-03
51GO:0045892: negative regulation of transcription, DNA-templated7.28E-03
52GO:0006869: lipid transport7.68E-03
53GO:0035556: intracellular signal transduction1.30E-02
54GO:0006457: protein folding1.50E-02
55GO:0006511: ubiquitin-dependent protein catabolic process1.55E-02
56GO:0009733: response to auxin2.24E-02
57GO:0009409: response to cold2.56E-02
58GO:0006351: transcription, DNA-templated2.94E-02
59GO:0006355: regulation of transcription, DNA-templated4.89E-02
RankGO TermAdjusted P value
1GO:0010276: phytol kinase activity0.00E+00
2GO:0008728: GTP diphosphokinase activity1.49E-05
3GO:0044390: ubiquitin-like protein conjugating enzyme binding1.49E-05
4GO:0015203: polyamine transmembrane transporter activity4.27E-05
5GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway5.99E-05
6GO:0004605: phosphatidate cytidylyltransferase activity9.99E-05
7GO:0015174: basic amino acid transmembrane transporter activity2.49E-04
8GO:0019904: protein domain specific binding3.06E-04
9GO:0008168: methyltransferase activity3.17E-04
10GO:0016791: phosphatase activity9.89E-04
11GO:0015293: symporter activity1.96E-03
12GO:0015297: antiporter activity3.93E-03
13GO:0016301: kinase activity6.38E-03
14GO:0003700: transcription factor activity, sequence-specific DNA binding6.68E-03
15GO:0008289: lipid binding1.05E-02
16GO:0005525: GTP binding1.78E-02
17GO:0005515: protein binding1.98E-02
18GO:0004842: ubiquitin-protein transferase activity2.59E-02
19GO:0003677: DNA binding3.46E-02
20GO:0016757: transferase activity, transferring glycosyl groups4.93E-02
RankGO TermAdjusted P value
1GO:0036513: Derlin-1 retrotranslocation complex4.27E-05
2GO:0048226: Casparian strip1.70E-04
3GO:0031969: chloroplast membrane6.35E-03
4GO:0005887: integral component of plasma membrane1.03E-02
5GO:0005730: nucleolus3.00E-02
6GO:0005829: cytosol3.13E-02
Gene type



Gene DE type