Gene description
GO biological process
response to cytokinin, response to salt stress, regulation of stomatal movement, vegetative to reproductive phase transition of meristem, DNA duplex unwinding, mRNA export from nucleus, response to cold, innate immune response, circadian rhythm, response to water deprivation, RNA secondary structure unwinding, response to osmotic stress, response to cadmium ion, alternative mRNA splicing, via spliceosome, response to zinc ion
GO cellular component
cytosol, nucleus, chloroplast, cytoplasm, plasmodesma, peroxisome, apoplast, mitochondrion
GO molecular function
protein binding, RNA binding
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Transcriptional regulation
Regulator:
AT1G13450, AT5G13790, AT2G46830, AT2G38250, AT3G14230, AT1G24260, AT5G61850, AT2G43010, AT1G01060
Target:
none
Protein-protein interaction network
The number of partners (degree) is: 44 (Top5%)
Coexpression network
Differentially expressed condition
12 conditions
Series | Control | Treatment | Log2FC | Adj. P value |
---|---|---|---|---|
GSE13739 | Col, WT, control 0 h | Col, WT, G.orontii 6 h | -1.59 | 8.81E-05 |
GSE13739 | Col, eds, control 0 h | Col, eds, G.orontii 6 h | -1.93 | 3.35E-06 |
GSE17464 | Laer, control | Laer, Alternaria brassicicola 3 d | 5.79 | 1.67E-09 |
GSE17464 | Laer, control | Laer, PstDC3000 12 h | 4.31 | 3.28E-06 |
GSE17464 | Penta, control | Penta, Alternaria brassicicola 3 d | 6.82 | 8.43E-12 |
GSE17464 | Penta, control | Penta, PstDC3000 12 h | 5.47 | 8.17E-09 |
GSE26679 | Col, WT, GC 0 h | Col, WT, GC 18 h | 4.42 | 6.87E-16 |
GSE26679 | Col, WT, GC 0 h | Col, WT, GC 36 h | 6.35 | 1.12E-19 |
GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 18 h | 4.93 | 5.14E-17 |
GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 36 h | 6.75 | 4.57E-20 |
GSE6556 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 48 h | 2.98 | 2.72E-04 |
GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | 4.82 | 9.70E-07 |
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