co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G21660

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080056: petal vascular tissue pattern formation	0.00E+00
2	GO:0043171: peptide catabolic process	0.00E+00
3	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
4	GO:0010378: temperature compensation of the circadian clock	0.00E+00
5	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
6	GO:0034472: snRNA 3'-end processing	1.22E-04
7	GO:0010496: intercellular transport	1.22E-04
8	GO:1990641: response to iron ion starvation	1.22E-04
9	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	1.22E-04
10	GO:1902265: abscisic acid homeostasis	1.22E-04
11	GO:0015812: gamma-aminobutyric acid transport	1.22E-04
12	GO:0032958: inositol phosphate biosynthetic process	1.22E-04
13	GO:0009409: response to cold	1.63E-04
14	GO:0007623: circadian rhythm	1.99E-04
15	GO:0006611: protein export from nucleus	2.82E-04
16	GO:0090057: root radial pattern formation	2.82E-04
17	GO:0051170: nuclear import	2.82E-04
18	GO:0030259: lipid glycosylation	2.82E-04
19	GO:0006101: citrate metabolic process	2.82E-04
20	GO:0042542: response to hydrogen peroxide	3.07E-04
21	GO:0042780: tRNA 3'-end processing	4.65E-04
22	GO:0000055: ribosomal large subunit export from nucleus	4.65E-04
23	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	4.65E-04
24	GO:0042256: mature ribosome assembly	4.65E-04
25	GO:0080167: response to karrikin	5.63E-04
26	GO:0006020: inositol metabolic process	6.66E-04
27	GO:0010601: positive regulation of auxin biosynthetic process	6.66E-04
28	GO:0015749: monosaccharide transport	6.66E-04
29	GO:0006646: phosphatidylethanolamine biosynthetic process	8.84E-04
30	GO:0009687: abscisic acid metabolic process	8.84E-04
31	GO:0015743: malate transport	8.84E-04
32	GO:0007029: endoplasmic reticulum organization	1.12E-03
33	GO:0000380: alternative mRNA splicing, via spliceosome	1.12E-03
34	GO:0048578: positive regulation of long-day photoperiodism, flowering	1.12E-03
35	GO:0016926: protein desumoylation	1.12E-03
36	GO:0009651: response to salt stress	1.31E-03
37	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.64E-03
38	GO:0006950: response to stress	1.67E-03
39	GO:0009737: response to abscisic acid	1.79E-03
40	GO:0048437: floral organ development	1.92E-03
41	GO:0010218: response to far red light	2.03E-03
42	GO:0009631: cold acclimation	2.13E-03
43	GO:0006102: isocitrate metabolic process	2.22E-03
44	GO:0009819: drought recovery	2.22E-03
45	GO:0009415: response to water	2.22E-03
46	GO:0032508: DNA duplex unwinding	2.22E-03
47	GO:0009637: response to blue light	2.33E-03
48	GO:0009827: plant-type cell wall modification	2.54E-03
49	GO:0001510: RNA methylation	2.54E-03
50	GO:0035556: intracellular signal transduction	2.61E-03
51	GO:0006970: response to osmotic stress	2.78E-03
52	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	2.87E-03
53	GO:0005982: starch metabolic process	3.21E-03
54	GO:0048354: mucilage biosynthetic process involved in seed coat development	3.21E-03
55	GO:0008202: steroid metabolic process	3.21E-03
56	GO:0008643: carbohydrate transport	3.23E-03
57	GO:0009970: cellular response to sulfate starvation	3.57E-03
58	GO:0006995: cellular response to nitrogen starvation	3.57E-03
59	GO:0010588: cotyledon vascular tissue pattern formation	4.71E-03
60	GO:2000012: regulation of auxin polar transport	4.71E-03
61	GO:0010102: lateral root morphogenesis	4.71E-03
62	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	4.71E-03
63	GO:0010030: positive regulation of seed germination	5.54E-03
64	GO:0019853: L-ascorbic acid biosynthetic process	5.54E-03
65	GO:0007165: signal transduction	6.15E-03
66	GO:0009414: response to water deprivation	6.76E-03
67	GO:0006825: copper ion transport	6.87E-03
68	GO:0009768: photosynthesis, light harvesting in photosystem I	6.87E-03
69	GO:0048511: rhythmic process	7.34E-03
70	GO:0061077: chaperone-mediated protein folding	7.34E-03
71	GO:0003333: amino acid transmembrane transport	7.34E-03
72	GO:0019748: secondary metabolic process	7.81E-03
73	GO:0006012: galactose metabolic process	8.30E-03
74	GO:0010214: seed coat development	8.80E-03
75	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.31E-03
76	GO:0000413: protein peptidyl-prolyl isomerization	9.83E-03
77	GO:0010051: xylem and phloem pattern formation	9.83E-03
78	GO:0042391: regulation of membrane potential	9.83E-03
79	GO:0080022: primary root development	9.83E-03
80	GO:0046323: glucose import	1.04E-02
81	GO:0010305: leaf vascular tissue pattern formation	1.04E-02
82	GO:0009738: abscisic acid-activated signaling pathway	1.08E-02
83	GO:0042752: regulation of circadian rhythm	1.09E-02
84	GO:0048544: recognition of pollen	1.09E-02
85	GO:0008654: phospholipid biosynthetic process	1.15E-02
86	GO:0009556: microsporogenesis	1.15E-02
87	GO:0010468: regulation of gene expression	1.18E-02
88	GO:1901657: glycosyl compound metabolic process	1.32E-02
89	GO:0005975: carbohydrate metabolic process	1.32E-02
90	GO:0016125: sterol metabolic process	1.38E-02
91	GO:0016126: sterol biosynthetic process	1.56E-02
92	GO:0009911: positive regulation of flower development	1.56E-02
93	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.62E-02
94	GO:0010029: regulation of seed germination	1.62E-02
95	GO:0048573: photoperiodism, flowering	1.75E-02
96	GO:0009817: defense response to fungus, incompatible interaction	1.88E-02
97	GO:0018298: protein-chromophore linkage	1.88E-02
98	GO:0000160: phosphorelay signal transduction system	1.95E-02
99	GO:0009813: flavonoid biosynthetic process	1.95E-02
100	GO:0009834: plant-type secondary cell wall biogenesis	2.02E-02
101	GO:0006811: ion transport	2.02E-02
102	GO:0010043: response to zinc ion	2.09E-02
103	GO:0010119: regulation of stomatal movement	2.09E-02
104	GO:0045087: innate immune response	2.23E-02
105	GO:0006099: tricarboxylic acid cycle	2.30E-02
106	GO:0010114: response to red light	2.67E-02
107	GO:0009926: auxin polar transport	2.67E-02
108	GO:0009640: photomorphogenesis	2.67E-02
109	GO:0000209: protein polyubiquitination	2.75E-02
110	GO:0000165: MAPK cascade	3.06E-02
111	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.06E-02
112	GO:0006812: cation transport	3.14E-02
113	GO:0006364: rRNA processing	3.30E-02
114	GO:0009585: red, far-red light phototransduction	3.30E-02
115	GO:0016567: protein ubiquitination	3.69E-02
116	GO:0048367: shoot system development	3.80E-02
117	GO:0009553: embryo sac development	4.15E-02
118	GO:0009908: flower development	4.48E-02
119	GO:0000398: mRNA splicing, via spliceosome	4.69E-02
120	GO:0009416: response to light stimulus	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
2	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
3	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
4	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
5	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
6	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
7	GO:0004567: beta-mannosidase activity	0.00E+00
8	GO:0080082: esculin beta-glucosidase activity	0.00E+00
9	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
10	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.22E-04
11	GO:0016906: sterol 3-beta-glucosyltransferase activity	1.22E-04
12	GO:0009679: hexose:proton symporter activity	1.22E-04
13	GO:0035671: enone reductase activity	1.22E-04
14	GO:0000829: inositol heptakisphosphate kinase activity	1.22E-04
15	GO:0010013: N-1-naphthylphthalamic acid binding	1.22E-04
16	GO:0080079: cellobiose glucosidase activity	1.22E-04
17	GO:0102203: brassicasterol glucosyltransferase activity	1.22E-04
18	GO:0102202: soladodine glucosyltransferase activity	1.22E-04
19	GO:0000828: inositol hexakisphosphate kinase activity	1.22E-04
20	GO:0070006: metalloaminopeptidase activity	1.22E-04
21	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.22E-04
22	GO:0004565: beta-galactosidase activity	2.65E-04
23	GO:0001047: core promoter binding	2.82E-04
24	GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters	2.82E-04
25	GO:0004609: phosphatidylserine decarboxylase activity	2.82E-04
26	GO:0003994: aconitate hydratase activity	2.82E-04
27	GO:0004839: ubiquitin activating enzyme activity	2.82E-04
28	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.82E-04
29	GO:0015180: L-alanine transmembrane transporter activity	2.82E-04
30	GO:0004096: catalase activity	4.65E-04
31	GO:0019829: cation-transporting ATPase activity	4.65E-04
32	GO:0017150: tRNA dihydrouridine synthase activity	4.65E-04
33	GO:0042781: 3'-tRNA processing endoribonuclease activity	4.65E-04
34	GO:0043023: ribosomal large subunit binding	6.66E-04
35	GO:0015189: L-lysine transmembrane transporter activity	6.66E-04
36	GO:0048027: mRNA 5'-UTR binding	6.66E-04
37	GO:0015181: arginine transmembrane transporter activity	6.66E-04
38	GO:0005313: L-glutamate transmembrane transporter activity	8.84E-04
39	GO:0005253: anion channel activity	8.84E-04
40	GO:0042277: peptide binding	8.84E-04
41	GO:0016929: SUMO-specific protease activity	1.12E-03
42	GO:0010294: abscisic acid glucosyltransferase activity	1.12E-03
43	GO:0015145: monosaccharide transmembrane transporter activity	1.12E-03
44	GO:0008641: small protein activating enzyme activity	1.12E-03
45	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.12E-03
46	GO:2001070: starch binding	1.37E-03
47	GO:0004629: phospholipase C activity	1.37E-03
48	GO:0015562: efflux transmembrane transporter activity	1.37E-03
49	GO:0000293: ferric-chelate reductase activity	1.37E-03
50	GO:0070300: phosphatidic acid binding	1.64E-03
51	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.64E-03
52	GO:0004435: phosphatidylinositol phospholipase C activity	1.64E-03
53	GO:0009881: photoreceptor activity	1.92E-03
54	GO:0015140: malate transmembrane transporter activity	1.92E-03
55	GO:0004033: aldo-keto reductase (NADP) activity	2.22E-03
56	GO:0005375: copper ion transmembrane transporter activity	2.54E-03
57	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.87E-03
58	GO:0004177: aminopeptidase activity	3.94E-03
59	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.71E-03
60	GO:0031624: ubiquitin conjugating enzyme binding	5.12E-03
61	GO:0004175: endopeptidase activity	5.12E-03
62	GO:0080043: quercetin 3-O-glucosyltransferase activity	5.21E-03
63	GO:0080044: quercetin 7-O-glucosyltransferase activity	5.21E-03
64	GO:0030552: cAMP binding	5.54E-03
65	GO:0030553: cGMP binding	5.54E-03
66	GO:0031409: pigment binding	5.98E-03
67	GO:0005216: ion channel activity	6.87E-03
68	GO:0008324: cation transmembrane transporter activity	6.87E-03
69	GO:0019706: protein-cysteine S-palmitoyltransferase activity	7.34E-03
70	GO:0004707: MAP kinase activity	7.34E-03
71	GO:0015297: antiporter activity	9.41E-03
72	GO:0005249: voltage-gated potassium channel activity	9.83E-03
73	GO:0030551: cyclic nucleotide binding	9.83E-03
74	GO:0003729: mRNA binding	1.28E-02
75	GO:0000156: phosphorelay response regulator activity	1.32E-02
76	GO:0016168: chlorophyll binding	1.62E-02
77	GO:0102483: scopolin beta-glucosidase activity	1.75E-02
78	GO:0050897: cobalt ion binding	2.09E-02
79	GO:0008422: beta-glucosidase activity	2.37E-02
80	GO:0051539: 4 iron, 4 sulfur cluster binding	2.44E-02
81	GO:0005509: calcium ion binding	2.48E-02
82	GO:0004722: protein serine/threonine phosphatase activity	2.50E-02
83	GO:0004185: serine-type carboxypeptidase activity	2.67E-02
84	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.98E-02
85	GO:0003824: catalytic activity	3.08E-02
86	GO:0015171: amino acid transmembrane transporter activity	3.55E-02
87	GO:0008234: cysteine-type peptidase activity	3.55E-02
88	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.80E-02
89	GO:0016874: ligase activity	4.06E-02
90	GO:0022857: transmembrane transporter activity	4.06E-02
91	GO:0004842: ubiquitin-protein transferase activity	4.10E-02
92	GO:0016757: transferase activity, transferring glycosyl groups	4.33E-02

Rank	GO Term	Adjusted P value
1	GO:0043036: starch grain	2.82E-04
2	GO:0005851: eukaryotic translation initiation factor 2B complex	1.37E-03
3	GO:0016363: nuclear matrix	1.64E-03
4	GO:0005618: cell wall	1.89E-03
5	GO:0046540: U4/U6 x U5 tri-snRNP complex	2.54E-03
6	GO:0031090: organelle membrane	2.87E-03
7	GO:0005773: vacuole	3.57E-03
8	GO:0031966: mitochondrial membrane	3.75E-03
9	GO:0005938: cell cortex	4.71E-03
10	GO:0030076: light-harvesting complex	5.54E-03
11	GO:0005783: endoplasmic reticulum	6.46E-03
12	GO:0005654: nucleoplasm	6.95E-03
13	GO:0009505: plant-type cell wall	9.87E-03
14	GO:0005777: peroxisome	1.34E-02
15	GO:0048046: apoplast	1.61E-02
16	GO:0005829: cytosol	1.79E-02
17	GO:0000151: ubiquitin ligase complex	1.88E-02
18	GO:0000786: nucleosome	2.16E-02
19	GO:0005886: plasma membrane	2.22E-02
20	GO:0005887: integral component of plasma membrane	3.80E-02
21	GO:0016607: nuclear speck	3.80E-02
22	GO:0016021: integral component of membrane	4.12E-02
23	GO:0005789: endoplasmic reticulum membrane	4.63E-02
24	GO:0022626: cytosolic ribosome	4.74E-02
25	GO:0010287: plastoglobule	4.79E-02