gene detail

Gene description

TAIR ID: AT1G68010

Short description: hydroxypyruvate reductase

Pathogen responsiveness: -0.29

General responsiveness: 3.42

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G074282

Wheat: No orthologous gene

GO biological process

photorespiration, oxidative photosynthetic carbon pathway, cellular response to light stimulus, oxidation-reduction process, cellular response to water deprivation

GO cellular component

peroxisome, cytosol, apoplast, chloroplast, integral component of membrane

GO molecular function

NAD binding, glyoxylate reductase (NADP) activity, glycerate dehydrogenase activity, hydroxypyruvate reductase activity, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Protein domain

Pfam	PF02826, D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Pfam	PF00389, D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

Metabolic pathway

PWY-181: photorespiration

KEGG pathway

PATH:ath01200: Carbon metabolism
PATH:ath00630: Glyoxylate and dicarboxylate metabolism
PATH:ath00260: Glycine, serine and threonine metabolism

Transcriptional regulation

Regulator:
AT1G24260, AT5G49450, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 5

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

12 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-3.79	8.45E-10
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-1.65	8.96E-07
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.71	7.74E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.63	7.09E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.61	1.14E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.59	1.29E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.82	3.63E-15
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.82	8.62E-12
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.67	1.51E-05
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.98	1.25E-07
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.16	6.59E-04
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-2.06	2.15E-06