GO Enrichment Analysis of Co-expressed Genes with
AT1G68010
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 2 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 3 | GO:0006098: pentose-phosphate shunt | 1.39E-05 |
| 4 | GO:0080093: regulation of photorespiration | 3.00E-05 |
| 5 | GO:0031998: regulation of fatty acid beta-oxidation | 3.00E-05 |
| 6 | GO:0051775: response to redox state | 3.00E-05 |
| 7 | GO:0006108: malate metabolic process | 3.49E-05 |
| 8 | GO:0006094: gluconeogenesis | 3.49E-05 |
| 9 | GO:0046686: response to cadmium ion | 1.24E-04 |
| 10 | GO:0005977: glycogen metabolic process | 1.32E-04 |
| 11 | GO:0006011: UDP-glucose metabolic process | 1.32E-04 |
| 12 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.97E-04 |
| 13 | GO:0006107: oxaloacetate metabolic process | 1.97E-04 |
| 14 | GO:0009658: chloroplast organization | 2.48E-04 |
| 15 | GO:0006734: NADH metabolic process | 2.67E-04 |
| 16 | GO:0009902: chloroplast relocation | 2.67E-04 |
| 17 | GO:0006542: glutamine biosynthetic process | 2.67E-04 |
| 18 | GO:0019676: ammonia assimilation cycle | 2.67E-04 |
| 19 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.67E-04 |
| 20 | GO:0006546: glycine catabolic process | 2.67E-04 |
| 21 | GO:0010236: plastoquinone biosynthetic process | 3.42E-04 |
| 22 | GO:0006097: glyoxylate cycle | 3.42E-04 |
| 23 | GO:0043097: pyrimidine nucleoside salvage | 3.42E-04 |
| 24 | GO:0006099: tricarboxylic acid cycle | 4.18E-04 |
| 25 | GO:0050665: hydrogen peroxide biosynthetic process | 4.20E-04 |
| 26 | GO:0010942: positive regulation of cell death | 4.20E-04 |
| 27 | GO:0006206: pyrimidine nucleobase metabolic process | 4.20E-04 |
| 28 | GO:0009854: oxidative photosynthetic carbon pathway | 5.02E-04 |
| 29 | GO:0009850: auxin metabolic process | 6.76E-04 |
| 30 | GO:0052543: callose deposition in cell wall | 6.76E-04 |
| 31 | GO:0048564: photosystem I assembly | 6.76E-04 |
| 32 | GO:0006096: glycolytic process | 8.01E-04 |
| 33 | GO:0009735: response to cytokinin | 9.86E-04 |
| 34 | GO:0006259: DNA metabolic process | 1.06E-03 |
| 35 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.16E-03 |
| 36 | GO:0006265: DNA topological change | 1.16E-03 |
| 37 | GO:0043085: positive regulation of catalytic activity | 1.16E-03 |
| 38 | GO:0019253: reductive pentose-phosphate cycle | 1.50E-03 |
| 39 | GO:0042343: indole glucosinolate metabolic process | 1.61E-03 |
| 40 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.73E-03 |
| 41 | GO:0008299: isoprenoid biosynthetic process | 1.98E-03 |
| 42 | GO:0098542: defense response to other organism | 2.11E-03 |
| 43 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.25E-03 |
| 44 | GO:0016226: iron-sulfur cluster assembly | 2.25E-03 |
| 45 | GO:0055114: oxidation-reduction process | 2.58E-03 |
| 46 | GO:0006662: glycerol ether metabolic process | 2.94E-03 |
| 47 | GO:0080167: response to karrikin | 3.04E-03 |
| 48 | GO:0007059: chromosome segregation | 3.09E-03 |
| 49 | GO:0007568: aging | 5.78E-03 |
| 50 | GO:0009637: response to blue light | 6.16E-03 |
| 51 | GO:0009853: photorespiration | 6.16E-03 |
| 52 | GO:0034599: cellular response to oxidative stress | 6.35E-03 |
| 53 | GO:0000209: protein polyubiquitination | 7.54E-03 |
| 54 | GO:0009585: red, far-red light phototransduction | 9.03E-03 |
| 55 | GO:0009058: biosynthetic process | 1.41E-02 |
| 56 | GO:0042742: defense response to bacterium | 1.61E-02 |
| 57 | GO:0006810: transport | 2.36E-02 |
| 58 | GO:0005975: carbohydrate metabolic process | 2.44E-02 |
| 59 | GO:0010200: response to chitin | 2.78E-02 |
| 60 | GO:0044550: secondary metabolite biosynthetic process | 2.88E-02 |
| 61 | GO:0015979: photosynthesis | 2.98E-02 |
| 62 | GO:0045454: cell redox homeostasis | 3.08E-02 |
| 63 | GO:0008152: metabolic process | 3.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 2 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 3 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 4 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 5 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 6 | GO:0016615: malate dehydrogenase activity | 3.09E-06 |
| 7 | GO:0004332: fructose-bisphosphate aldolase activity | 3.09E-06 |
| 8 | GO:0030060: L-malate dehydrogenase activity | 4.52E-06 |
| 9 | GO:0008746: NAD(P)+ transhydrogenase activity | 3.00E-05 |
| 10 | GO:0052638: indole-3-butyrate beta-glucosyltransferase activity | 3.00E-05 |
| 11 | GO:0050347: trans-octaprenyltranstransferase activity | 7.58E-05 |
| 12 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 7.58E-05 |
| 13 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 1.32E-04 |
| 14 | GO:0032947: protein complex scaffold | 1.32E-04 |
| 15 | GO:0048038: quinone binding | 1.63E-04 |
| 16 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.97E-04 |
| 17 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.97E-04 |
| 18 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.97E-04 |
| 19 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.97E-04 |
| 20 | GO:0008891: glycolate oxidase activity | 2.67E-04 |
| 21 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.67E-04 |
| 22 | GO:0008453: alanine-glyoxylate transaminase activity | 2.67E-04 |
| 23 | GO:0004356: glutamate-ammonia ligase activity | 3.42E-04 |
| 24 | GO:0004849: uridine kinase activity | 5.02E-04 |
| 25 | GO:0043022: ribosome binding | 6.76E-04 |
| 26 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 7.68E-04 |
| 27 | GO:0008047: enzyme activator activity | 1.06E-03 |
| 28 | GO:0051536: iron-sulfur cluster binding | 1.86E-03 |
| 29 | GO:0047134: protein-disulfide reductase activity | 2.66E-03 |
| 30 | GO:0008080: N-acetyltransferase activity | 2.94E-03 |
| 31 | GO:0004791: thioredoxin-disulfide reductase activity | 3.09E-03 |
| 32 | GO:0010181: FMN binding | 3.09E-03 |
| 33 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.71E-03 |
| 34 | GO:0016491: oxidoreductase activity | 3.76E-03 |
| 35 | GO:0004222: metalloendopeptidase activity | 5.60E-03 |
| 36 | GO:0005198: structural molecule activity | 7.96E-03 |
| 37 | GO:0031625: ubiquitin protein ligase binding | 9.70E-03 |
| 38 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.09E-02 |
| 39 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.09E-02 |
| 40 | GO:0015035: protein disulfide oxidoreductase activity | 1.18E-02 |
| 41 | GO:0016758: transferase activity, transferring hexosyl groups | 1.33E-02 |
| 42 | GO:0005506: iron ion binding | 1.58E-02 |
| 43 | GO:0008194: UDP-glycosyltransferase activity | 1.85E-02 |
| 44 | GO:0042802: identical protein binding | 2.02E-02 |
| 45 | GO:0046982: protein heterodimerization activity | 2.29E-02 |
| 46 | GO:0004672: protein kinase activity | 2.36E-02 |
| 47 | GO:0061630: ubiquitin protein ligase activity | 2.81E-02 |
| 48 | GO:0004871: signal transducer activity | 3.18E-02 |
| 49 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.25E-02 |
| 50 | GO:0016787: hydrolase activity | 3.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.59E-15 |
| 3 | GO:0009570: chloroplast stroma | 5.87E-08 |
| 4 | GO:0048046: apoplast | 6.47E-08 |
| 5 | GO:0009941: chloroplast envelope | 1.94E-07 |
| 6 | GO:0009579: thylakoid | 6.90E-07 |
| 7 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.39E-05 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 3.16E-05 |
| 9 | GO:0005960: glycine cleavage complex | 1.97E-04 |
| 10 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 2.67E-04 |
| 11 | GO:0009707: chloroplast outer membrane | 3.16E-04 |
| 12 | GO:0010287: plastoglobule | 1.12E-03 |
| 13 | GO:0005777: peroxisome | 1.30E-03 |
| 14 | GO:0019013: viral nucleocapsid | 1.38E-03 |
| 15 | GO:0009534: chloroplast thylakoid | 1.39E-03 |
| 16 | GO:0009536: plastid | 3.44E-03 |
| 17 | GO:0010319: stromule | 4.03E-03 |
| 18 | GO:0009295: nucleoid | 4.03E-03 |
| 19 | GO:0031977: thylakoid lumen | 6.94E-03 |
| 20 | GO:0022626: cytosolic ribosome | 7.57E-03 |
| 21 | GO:0005834: heterotrimeric G-protein complex | 1.06E-02 |
| 22 | GO:0009706: chloroplast inner membrane | 1.16E-02 |
| 23 | GO:0005623: cell | 1.38E-02 |
| 24 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.48E-02 |
| 25 | GO:0031969: chloroplast membrane | 2.71E-02 |
| 26 | GO:0043231: intracellular membrane-bounded organelle | 3.83E-02 |