co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G68010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033494: ferulate metabolic process	0.00E+00
2	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
3	GO:1902171: regulation of tocopherol cyclase activity	0.00E+00
4	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
5	GO:0010207: photosystem II assembly	1.56E-05
6	GO:0006636: unsaturated fatty acid biosynthetic process	2.28E-05
7	GO:0043953: protein transport by the Tat complex	1.58E-04
8	GO:0046467: membrane lipid biosynthetic process	1.58E-04
9	GO:0015671: oxygen transport	1.58E-04
10	GO:0071277: cellular response to calcium ion	1.58E-04
11	GO:0019544: arginine catabolic process to glutamate	1.58E-04
12	GO:0000481: maturation of 5S rRNA	1.58E-04
13	GO:0042371: vitamin K biosynthetic process	1.58E-04
14	GO:0065002: intracellular protein transmembrane transport	1.58E-04
15	GO:0071461: cellular response to redox state	1.58E-04
16	GO:0080093: regulation of photorespiration	1.58E-04
17	GO:0031998: regulation of fatty acid beta-oxidation	1.58E-04
18	GO:0034337: RNA folding	1.58E-04
19	GO:0006098: pentose-phosphate shunt	1.77E-04
20	GO:0015979: photosynthesis	2.08E-04
21	GO:0009773: photosynthetic electron transport in photosystem I	2.91E-04
22	GO:0010218: response to far red light	3.10E-04
23	GO:0051645: Golgi localization	3.60E-04
24	GO:0080029: cellular response to boron-containing substance levels	3.60E-04
25	GO:0080005: photosystem stoichiometry adjustment	3.60E-04
26	GO:0071457: cellular response to ozone	3.60E-04
27	GO:0010541: acropetal auxin transport	3.60E-04
28	GO:0060151: peroxisome localization	3.60E-04
29	GO:0009637: response to blue light	3.73E-04
30	GO:0006094: gluconeogenesis	3.82E-04
31	GO:0019253: reductive pentose-phosphate cycle	4.31E-04
32	GO:0090391: granum assembly	5.89E-04
33	GO:0051646: mitochondrion localization	5.89E-04
34	GO:0010160: formation of animal organ boundary	5.89E-04
35	GO:0090436: leaf pavement cell development	5.89E-04
36	GO:0005977: glycogen metabolic process	5.89E-04
37	GO:0009768: photosynthesis, light harvesting in photosystem I	6.55E-04
38	GO:0019748: secondary metabolic process	7.84E-04
39	GO:0043481: anthocyanin accumulation in tissues in response to UV light	8.43E-04
40	GO:0010731: protein glutathionylation	8.43E-04
41	GO:2001141: regulation of RNA biosynthetic process	8.43E-04
42	GO:0046713: borate transport	8.43E-04
43	GO:0071484: cellular response to light intensity	8.43E-04
44	GO:0006096: glycolytic process	9.24E-04
45	GO:0015994: chlorophyll metabolic process	1.12E-03
46	GO:2000122: negative regulation of stomatal complex development	1.12E-03
47	GO:0010021: amylopectin biosynthetic process	1.12E-03
48	GO:0010037: response to carbon dioxide	1.12E-03
49	GO:0015976: carbon utilization	1.12E-03
50	GO:0071486: cellular response to high light intensity	1.12E-03
51	GO:0015689: molybdate ion transport	1.12E-03
52	GO:0009765: photosynthesis, light harvesting	1.12E-03
53	GO:0071493: cellular response to UV-B	1.41E-03
54	GO:0043097: pyrimidine nucleoside salvage	1.41E-03
55	GO:0000278: mitotic cell cycle	1.41E-03
56	GO:0006097: glyoxylate cycle	1.41E-03
57	GO:0006465: signal peptide processing	1.41E-03
58	GO:0055114: oxidation-reduction process	1.61E-03
59	GO:0060918: auxin transport	1.74E-03
60	GO:0006206: pyrimidine nucleobase metabolic process	1.74E-03
61	GO:0010190: cytochrome b6f complex assembly	1.74E-03
62	GO:0050665: hydrogen peroxide biosynthetic process	1.74E-03
63	GO:0042549: photosystem II stabilization	1.74E-03
64	GO:0005975: carbohydrate metabolic process	1.90E-03
65	GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity	2.09E-03
66	GO:0009854: oxidative photosynthetic carbon pathway	2.09E-03
67	GO:0015995: chlorophyll biosynthetic process	2.38E-03
68	GO:0009769: photosynthesis, light harvesting in photosystem II	2.45E-03
69	GO:0009645: response to low light intensity stimulus	2.45E-03
70	GO:1900056: negative regulation of leaf senescence	2.45E-03
71	GO:0018298: protein-chromophore linkage	2.64E-03
72	GO:0008610: lipid biosynthetic process	2.84E-03
73	GO:0009642: response to light intensity	2.84E-03
74	GO:0070413: trehalose metabolism in response to stress	2.84E-03
75	GO:0009704: de-etiolation	2.84E-03
76	GO:0032508: DNA duplex unwinding	2.84E-03
77	GO:0050821: protein stabilization	2.84E-03
78	GO:0052543: callose deposition in cell wall	2.84E-03
79	GO:0016559: peroxisome fission	2.84E-03
80	GO:0019430: removal of superoxide radicals	3.25E-03
81	GO:0009657: plastid organization	3.25E-03
82	GO:0010204: defense response signaling pathway, resistance gene-independent	3.25E-03
83	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.25E-03
84	GO:0071482: cellular response to light stimulus	3.25E-03
85	GO:0034599: cellular response to oxidative stress	3.48E-03
86	GO:0009735: response to cytokinin	3.66E-03
87	GO:0019432: triglyceride biosynthetic process	3.67E-03
88	GO:0090333: regulation of stomatal closure	3.67E-03
89	GO:0006783: heme biosynthetic process	3.67E-03
90	GO:0006631: fatty acid metabolic process	3.95E-03
91	GO:0010380: regulation of chlorophyll biosynthetic process	4.12E-03
92	GO:0007346: regulation of mitotic cell cycle	4.12E-03
93	GO:0005982: starch metabolic process	4.12E-03
94	GO:0006779: porphyrin-containing compound biosynthetic process	4.12E-03
95	GO:0009416: response to light stimulus	4.20E-03
96	GO:0010114: response to red light	4.29E-03
97	GO:0006782: protoporphyrinogen IX biosynthetic process	4.58E-03
98	GO:0043085: positive regulation of catalytic activity	5.05E-03
99	GO:0006352: DNA-templated transcription, initiation	5.05E-03
100	GO:0018119: peptidyl-cysteine S-nitrosylation	5.05E-03
101	GO:0002213: defense response to insect	5.55E-03
102	GO:0008361: regulation of cell size	5.55E-03
103	GO:0030048: actin filament-based movement	6.06E-03
104	GO:0006108: malate metabolic process	6.06E-03
105	GO:0006006: glucose metabolic process	6.06E-03
106	GO:0009767: photosynthetic electron transport chain	6.06E-03
107	GO:0006810: transport	6.36E-03
108	GO:0010143: cutin biosynthetic process	6.59E-03
109	GO:0010020: chloroplast fission	6.59E-03
110	GO:0010540: basipetal auxin transport	6.59E-03
111	GO:0048467: gynoecium development	6.59E-03
112	GO:0042343: indole glucosinolate metabolic process	7.13E-03
113	GO:0010025: wax biosynthetic process	7.69E-03
114	GO:0042023: DNA endoreduplication	7.69E-03
115	GO:0009833: plant-type primary cell wall biogenesis	7.69E-03
116	GO:0006833: water transport	7.69E-03
117	GO:0005992: trehalose biosynthetic process	8.27E-03
118	GO:0009695: jasmonic acid biosynthetic process	8.86E-03
119	GO:0098542: defense response to other organism	9.46E-03
120	GO:0009269: response to desiccation	9.46E-03
121	GO:0035428: hexose transmembrane transport	1.01E-02
122	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.01E-02
123	GO:0030433: ubiquitin-dependent ERAD pathway	1.01E-02
124	GO:0030245: cellulose catabolic process	1.01E-02
125	GO:0048443: stamen development	1.14E-02
126	GO:0042742: defense response to bacterium	1.22E-02
127	GO:0042335: cuticle development	1.27E-02
128	GO:0034220: ion transmembrane transport	1.27E-02
129	GO:0006633: fatty acid biosynthetic process	1.30E-02
130	GO:0006413: translational initiation	1.33E-02
131	GO:0009958: positive gravitropism	1.34E-02
132	GO:0071472: cellular response to salt stress	1.34E-02
133	GO:0006520: cellular amino acid metabolic process	1.34E-02
134	GO:0010154: fruit development	1.34E-02
135	GO:0006662: glycerol ether metabolic process	1.34E-02
136	GO:0046323: glucose import	1.34E-02
137	GO:0009791: post-embryonic development	1.48E-02
138	GO:0019252: starch biosynthetic process	1.48E-02
139	GO:0010193: response to ozone	1.56E-02
140	GO:0032502: developmental process	1.63E-02
141	GO:0010090: trichome morphogenesis	1.71E-02
142	GO:1901657: glycosyl compound metabolic process	1.71E-02
143	GO:0009639: response to red or far red light	1.78E-02
144	GO:0009567: double fertilization forming a zygote and endosperm	1.78E-02
145	GO:0009409: response to cold	1.93E-02
146	GO:0051607: defense response to virus	1.94E-02
147	GO:0010027: thylakoid membrane organization	2.02E-02
148	GO:0009627: systemic acquired resistance	2.19E-02
149	GO:0042128: nitrate assimilation	2.19E-02
150	GO:0009658: chloroplast organization	2.21E-02
151	GO:0006950: response to stress	2.27E-02
152	GO:0016311: dephosphorylation	2.36E-02
153	GO:0016049: cell growth	2.36E-02
154	GO:0055085: transmembrane transport	2.42E-02
155	GO:0030244: cellulose biosynthetic process	2.44E-02
156	GO:0006811: ion transport	2.62E-02
157	GO:0048527: lateral root development	2.71E-02
158	GO:0010119: regulation of stomatal movement	2.71E-02
159	GO:0009631: cold acclimation	2.71E-02
160	GO:0009910: negative regulation of flower development	2.71E-02
161	GO:0080167: response to karrikin	2.74E-02
162	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.83E-02
163	GO:0009853: photorespiration	2.89E-02
164	GO:0006099: tricarboxylic acid cycle	2.98E-02
165	GO:0009640: photomorphogenesis	3.46E-02
166	GO:0009926: auxin polar transport	3.46E-02
167	GO:0000209: protein polyubiquitination	3.56E-02
168	GO:0009644: response to high light intensity	3.66E-02
169	GO:0009636: response to toxic substance	3.76E-02
170	GO:0006855: drug transmembrane transport	3.86E-02
171	GO:0016042: lipid catabolic process	3.92E-02
172	GO:0010224: response to UV-B	4.38E-02
173	GO:0016310: phosphorylation	4.59E-02
174	GO:0006417: regulation of translation	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
2	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
3	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
4	GO:0008974: phosphoribulokinase activity	0.00E+00
5	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
6	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
7	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
8	GO:0004768: stearoyl-CoA 9-desaturase activity	0.00E+00
9	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
10	GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	0.00E+00
11	GO:0004332: fructose-bisphosphate aldolase activity	4.79E-05
12	GO:0015168: glycerol transmembrane transporter activity	1.58E-04
13	GO:0004328: formamidase activity	1.58E-04
14	GO:0005344: oxygen transporter activity	1.58E-04
15	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	3.60E-04
16	GO:0061575: cyclin-dependent protein serine/threonine kinase activator activity	3.60E-04
17	GO:0019156: isoamylase activity	3.60E-04
18	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	3.60E-04
19	GO:0008883: glutamyl-tRNA reductase activity	3.60E-04
20	GO:0047746: chlorophyllase activity	3.60E-04
21	GO:0009977: proton motive force dependent protein transmembrane transporter activity	3.60E-04
22	GO:0004312: fatty acid synthase activity	3.60E-04
23	GO:0004565: beta-galactosidase activity	3.82E-04
24	GO:0042802: identical protein binding	5.24E-04
25	GO:0031409: pigment binding	5.37E-04
26	GO:0050734: hydroxycinnamoyltransferase activity	5.89E-04
27	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	5.89E-04
28	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	5.89E-04
29	GO:0016851: magnesium chelatase activity	8.43E-04
30	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	8.43E-04
31	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	8.43E-04
32	GO:0046715: borate transmembrane transporter activity	8.43E-04
33	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	8.43E-04
34	GO:0001872: (1->3)-beta-D-glucan binding	8.43E-04
35	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	8.43E-04
36	GO:0016987: sigma factor activity	1.12E-03
37	GO:0015098: molybdate ion transmembrane transporter activity	1.12E-03
38	GO:0009011: starch synthase activity	1.12E-03
39	GO:0008891: glycolate oxidase activity	1.12E-03
40	GO:0015204: urea transmembrane transporter activity	1.12E-03
41	GO:0001053: plastid sigma factor activity	1.12E-03
42	GO:0008453: alanine-glyoxylate transaminase activity	1.12E-03
43	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.41E-03
44	GO:0016491: oxidoreductase activity	1.43E-03
45	GO:0000293: ferric-chelate reductase activity	1.74E-03
46	GO:0004784: superoxide dismutase activity	1.74E-03
47	GO:0004556: alpha-amylase activity	1.74E-03
48	GO:0016615: malate dehydrogenase activity	1.74E-03
49	GO:2001070: starch binding	1.74E-03
50	GO:0015250: water channel activity	2.03E-03
51	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	2.09E-03
52	GO:0004849: uridine kinase activity	2.09E-03
53	GO:0030060: L-malate dehydrogenase activity	2.09E-03
54	GO:0016168: chlorophyll binding	2.14E-03
55	GO:0005337: nucleoside transmembrane transporter activity	2.84E-03
56	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.13E-03
57	GO:0003993: acid phosphatase activity	3.48E-03
58	GO:0050661: NADP binding	3.80E-03
59	GO:0004185: serine-type carboxypeptidase activity	4.29E-03
60	GO:0030234: enzyme regulator activity	4.58E-03
61	GO:0008047: enzyme activator activity	4.58E-03
62	GO:0010329: auxin efflux transmembrane transporter activity	6.06E-03
63	GO:0004089: carbonate dehydratase activity	6.06E-03
64	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	6.39E-03
65	GO:0003774: motor activity	6.59E-03
66	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	7.04E-03
67	GO:0043130: ubiquitin binding	8.27E-03
68	GO:0005528: FK506 binding	8.27E-03
69	GO:0008810: cellulase activity	1.07E-02
70	GO:0016760: cellulose synthase (UDP-forming) activity	1.07E-02
71	GO:0022891: substrate-specific transmembrane transporter activity	1.07E-02
72	GO:0003727: single-stranded RNA binding	1.14E-02
73	GO:0047134: protein-disulfide reductase activity	1.20E-02
74	GO:0016787: hydrolase activity	1.23E-02
75	GO:0005355: glucose transmembrane transporter activity	1.41E-02
76	GO:0010181: FMN binding	1.41E-02
77	GO:0004791: thioredoxin-disulfide reductase activity	1.41E-02
78	GO:0016853: isomerase activity	1.41E-02
79	GO:0019901: protein kinase binding	1.48E-02
80	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.71E-02
81	GO:0016791: phosphatase activity	1.78E-02
82	GO:0016759: cellulose synthase activity	1.78E-02
83	GO:0016788: hydrolase activity, acting on ester bonds	2.25E-02
84	GO:0102483: scopolin beta-glucosidase activity	2.27E-02
85	GO:0030247: polysaccharide binding	2.27E-02
86	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.62E-02
87	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.71E-02
88	GO:0052689: carboxylic ester hydrolase activity	3.03E-02
89	GO:0008422: beta-glucosidase activity	3.08E-02
90	GO:0042393: histone binding	3.17E-02
91	GO:0004364: glutathione transferase activity	3.36E-02
92	GO:0043621: protein self-association	3.66E-02
93	GO:0051537: 2 iron, 2 sulfur cluster binding	3.66E-02
94	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.86E-02
95	GO:0051287: NAD binding	3.96E-02
96	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.28E-02
97	GO:0031625: ubiquitin protein ligase binding	4.60E-02
98	GO:0045330: aspartyl esterase activity	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0042579: microbody	0.00E+00
2	GO:0043235: receptor complex	0.00E+00
3	GO:0009507: chloroplast	1.04E-23
4	GO:0009535: chloroplast thylakoid membrane	2.81E-09
5	GO:0009570: chloroplast stroma	5.49E-09
6	GO:0009941: chloroplast envelope	3.48E-08
7	GO:0009534: chloroplast thylakoid	5.27E-07
8	GO:0010287: plastoglobule	8.38E-07
9	GO:0009579: thylakoid	5.56E-06
10	GO:0009543: chloroplast thylakoid lumen	1.85E-05
11	GO:0005773: vacuole	8.48E-05
12	GO:0009522: photosystem I	9.04E-05
13	GO:0048046: apoplast	9.10E-05
14	GO:0009523: photosystem II	1.00E-04
15	GO:0005787: signal peptidase complex	1.58E-04
16	GO:0009344: nitrite reductase complex [NAD(P)H]	1.58E-04
17	GO:0031361: integral component of thylakoid membrane	1.58E-04
18	GO:0043036: starch grain	3.60E-04
19	GO:0030095: chloroplast photosystem II	4.31E-04
20	GO:0030076: light-harvesting complex	4.83E-04
21	GO:0010007: magnesium chelatase complex	5.89E-04
22	GO:0033281: TAT protein transport complex	5.89E-04
23	GO:0009517: PSII associated light-harvesting complex II	1.12E-03
24	GO:0005777: peroxisome	1.20E-03
25	GO:0010319: stromule	1.81E-03
26	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	3.25E-03
27	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.67E-03
28	GO:0031977: thylakoid lumen	3.95E-03
29	GO:0016459: myosin complex	4.58E-03
30	GO:0031969: chloroplast membrane	5.28E-03
31	GO:0032040: small-subunit processome	5.55E-03
32	GO:0043234: protein complex	7.69E-03
33	GO:0016021: integral component of membrane	7.85E-03
34	GO:0009654: photosystem II oxygen evolving complex	8.86E-03
35	GO:0019898: extrinsic component of membrane	1.48E-02
36	GO:0009707: chloroplast outer membrane	2.44E-02
37	GO:0019005: SCF ubiquitin ligase complex	2.44E-02
38	GO:0005618: cell wall	3.47E-02