co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G68010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
2	GO:0005996: monosaccharide metabolic process	0.00E+00
3	GO:0016553: base conversion or substitution editing	0.00E+00
4	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
5	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
6	GO:0030388: fructose 1,6-bisphosphate metabolic process	0.00E+00
7	GO:0015995: chlorophyll biosynthetic process	2.24E-18
8	GO:0015979: photosynthesis	2.76E-18
9	GO:0006000: fructose metabolic process	1.96E-08
10	GO:0009735: response to cytokinin	2.39E-08
11	GO:0032544: plastid translation	8.30E-08
12	GO:0010021: amylopectin biosynthetic process	2.78E-07
13	GO:0009773: photosynthetic electron transport in photosystem I	4.34E-07
14	GO:0019252: starch biosynthetic process	4.67E-07
15	GO:0006094: gluconeogenesis	8.26E-07
16	GO:0010207: photosystem II assembly	1.10E-06
17	GO:0009768: photosynthesis, light harvesting in photosystem I	2.99E-06
18	GO:0018298: protein-chromophore linkage	3.18E-06
19	GO:0009658: chloroplast organization	5.98E-06
20	GO:0006002: fructose 6-phosphate metabolic process	7.67E-06
21	GO:0006783: heme biosynthetic process	1.07E-05
22	GO:0055114: oxidation-reduction process	2.77E-05
23	GO:0005986: sucrose biosynthetic process	3.79E-05
24	GO:0045727: positive regulation of translation	4.46E-05
25	GO:0010600: regulation of auxin biosynthetic process	4.46E-05
26	GO:0019253: reductive pentose-phosphate cycle	4.63E-05
27	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.43E-04
28	GO:0010114: response to red light	1.52E-04
29	GO:0010196: nonphotochemical quenching	1.88E-04
30	GO:0010928: regulation of auxin mediated signaling pathway	2.38E-04
31	GO:0009704: de-etiolation	2.38E-04
32	GO:0043953: protein transport by the Tat complex	2.55E-04
33	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	2.55E-04
34	GO:0043489: RNA stabilization	2.55E-04
35	GO:0051775: response to redox state	2.55E-04
36	GO:0071277: cellular response to calcium ion	2.55E-04
37	GO:1904966: positive regulation of vitamin E biosynthetic process	2.55E-04
38	GO:1904964: positive regulation of phytol biosynthetic process	2.55E-04
39	GO:0065002: intracellular protein transmembrane transport	2.55E-04
40	GO:0080093: regulation of photorespiration	2.55E-04
41	GO:0031998: regulation of fatty acid beta-oxidation	2.55E-04
42	GO:0034337: RNA folding	2.55E-04
43	GO:0006779: porphyrin-containing compound biosynthetic process	4.21E-04
44	GO:0010027: thylakoid membrane organization	4.65E-04
45	GO:0006782: protoporphyrinogen IX biosynthetic process	4.92E-04
46	GO:1902326: positive regulation of chlorophyll biosynthetic process	5.64E-04
47	GO:0008616: queuosine biosynthetic process	5.64E-04
48	GO:0018119: peptidyl-cysteine S-nitrosylation	5.68E-04
49	GO:0006108: malate metabolic process	7.37E-04
50	GO:0010218: response to far red light	7.38E-04
51	GO:0006412: translation	8.04E-04
52	GO:0009637: response to blue light	8.78E-04
53	GO:0090391: granum assembly	9.15E-04
54	GO:0006518: peptide metabolic process	9.15E-04
55	GO:0034051: negative regulation of plant-type hypersensitive response	9.15E-04
56	GO:0005977: glycogen metabolic process	9.15E-04
57	GO:0034599: cellular response to oxidative stress	9.27E-04
58	GO:0006636: unsaturated fatty acid biosynthetic process	1.03E-03
59	GO:0006107: oxaloacetate metabolic process	1.31E-03
60	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.31E-03
61	GO:0033014: tetrapyrrole biosynthetic process	1.31E-03
62	GO:0010731: protein glutathionylation	1.31E-03
63	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.31E-03
64	GO:0071484: cellular response to light intensity	1.31E-03
65	GO:0031408: oxylipin biosynthetic process	1.37E-03
66	GO:0019748: secondary metabolic process	1.50E-03
67	GO:0006109: regulation of carbohydrate metabolic process	1.75E-03
68	GO:0006536: glutamate metabolic process	1.75E-03
69	GO:0006364: rRNA processing	1.75E-03
70	GO:0006546: glycine catabolic process	1.75E-03
71	GO:0006734: NADH metabolic process	1.75E-03
72	GO:0015976: carbon utilization	1.75E-03
73	GO:0000304: response to singlet oxygen	2.23E-03
74	GO:0006656: phosphatidylcholine biosynthetic process	2.23E-03
75	GO:0043097: pyrimidine nucleoside salvage	2.23E-03
76	GO:0006097: glyoxylate cycle	2.23E-03
77	GO:0009107: lipoate biosynthetic process	2.23E-03
78	GO:0006662: glycerol ether metabolic process	2.24E-03
79	GO:0005975: carbohydrate metabolic process	2.37E-03
80	GO:0006206: pyrimidine nucleobase metabolic process	2.75E-03
81	GO:0050665: hydrogen peroxide biosynthetic process	2.75E-03
82	GO:0042549: photosystem II stabilization	2.75E-03
83	GO:1901259: chloroplast rRNA processing	3.30E-03
84	GO:0009854: oxidative photosynthetic carbon pathway	3.30E-03
85	GO:0009772: photosynthetic electron transport in photosystem II	3.89E-03
86	GO:1900057: positive regulation of leaf senescence	3.89E-03
87	GO:0009645: response to low light intensity stimulus	3.89E-03
88	GO:0010161: red light signaling pathway	3.89E-03
89	GO:0048564: photosystem I assembly	4.52E-03
90	GO:0005978: glycogen biosynthetic process	4.52E-03
91	GO:0009642: response to light intensity	4.52E-03
92	GO:0009657: plastid organization	5.18E-03
93	GO:0010206: photosystem II repair	5.86E-03
94	GO:0090333: regulation of stomatal closure	5.86E-03
95	GO:0006754: ATP biosynthetic process	5.86E-03
96	GO:0010205: photoinhibition	6.58E-03
97	GO:0005982: starch metabolic process	6.58E-03
98	GO:0006099: tricarboxylic acid cycle	6.86E-03
99	GO:0006810: transport	6.92E-03
100	GO:0045036: protein targeting to chloroplast	7.33E-03
101	GO:0009698: phenylpropanoid metabolic process	8.11E-03
102	GO:0019684: photosynthesis, light reaction	8.11E-03
103	GO:0043085: positive regulation of catalytic activity	8.11E-03
104	GO:0000272: polysaccharide catabolic process	8.11E-03
105	GO:0009750: response to fructose	8.11E-03
106	GO:0005983: starch catabolic process	8.92E-03
107	GO:0006807: nitrogen compound metabolic process	9.75E-03
108	GO:0018107: peptidyl-threonine phosphorylation	9.75E-03
109	GO:0009767: photosynthetic electron transport chain	9.75E-03
110	GO:0042254: ribosome biogenesis	9.81E-03
111	GO:0009266: response to temperature stimulus	1.06E-02
112	GO:0042742: defense response to bacterium	1.08E-02
113	GO:0009585: red, far-red light phototransduction	1.14E-02
114	GO:0007031: peroxisome organization	1.15E-02
115	GO:0005985: sucrose metabolic process	1.15E-02
116	GO:0000027: ribosomal large subunit assembly	1.34E-02
117	GO:0061077: chaperone-mediated protein folding	1.53E-02
118	GO:0045454: cell redox homeostasis	1.58E-02
119	GO:0010017: red or far-red light signaling pathway	1.64E-02
120	GO:0016226: iron-sulfur cluster assembly	1.64E-02
121	GO:0035428: hexose transmembrane transport	1.64E-02
122	GO:0007005: mitochondrion organization	1.64E-02
123	GO:0006396: RNA processing	1.68E-02
124	GO:0009693: ethylene biosynthetic process	1.74E-02
125	GO:0009409: response to cold	1.81E-02
126	GO:0032259: methylation	1.95E-02
127	GO:0042631: cellular response to water deprivation	2.07E-02
128	GO:0006606: protein import into nucleus	2.07E-02
129	GO:0046323: glucose import	2.18E-02
130	GO:0015986: ATP synthesis coupled proton transport	2.29E-02
131	GO:0009791: post-embryonic development	2.41E-02
132	GO:0000302: response to reactive oxygen species	2.53E-02
133	GO:0006633: fatty acid biosynthetic process	2.57E-02
134	GO:0009567: double fertilization forming a zygote and endosperm	2.90E-02
135	GO:0042128: nitrate assimilation	3.56E-02
136	GO:0010411: xyloglucan metabolic process	3.70E-02
137	GO:0006950: response to stress	3.70E-02
138	GO:0016311: dephosphorylation	3.83E-02
139	GO:0009631: cold acclimation	4.41E-02
140	GO:0007568: aging	4.41E-02
141	GO:0009853: photorespiration	4.70E-02
142	GO:0045087: innate immune response	4.70E-02
143	GO:0016051: carbohydrate biosynthetic process	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
2	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	0.00E+00
3	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
4	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
5	GO:0090711: FMN hydrolase activity	0.00E+00
6	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
7	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
8	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
9	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
10	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
11	GO:0008974: phosphoribulokinase activity	0.00E+00
12	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
13	GO:0046408: chlorophyll synthetase activity	0.00E+00
14	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
15	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
16	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
17	GO:0019843: rRNA binding	1.07E-12
18	GO:0016851: magnesium chelatase activity	9.53E-08
19	GO:0016168: chlorophyll binding	1.82E-06
20	GO:0031409: pigment binding	1.87E-06
21	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	3.02E-06
22	GO:0016630: protochlorophyllide reductase activity	3.02E-06
23	GO:0010277: chlorophyllide a oxygenase [overall] activity	1.09E-05
24	GO:0009011: starch synthase activity	4.46E-05
25	GO:0008266: poly(U) RNA binding	4.63E-05
26	GO:0016615: malate dehydrogenase activity	1.04E-04
27	GO:0003735: structural constituent of ribosome	1.26E-04
28	GO:0030060: L-malate dehydrogenase activity	1.43E-04
29	GO:0051537: 2 iron, 2 sulfur cluster binding	1.74E-04
30	GO:0016776: phosphotransferase activity, phosphate group as acceptor	2.55E-04
31	GO:0004325: ferrochelatase activity	2.55E-04
32	GO:0004853: uroporphyrinogen decarboxylase activity	2.55E-04
33	GO:0008746: NAD(P)+ transhydrogenase activity	2.55E-04
34	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	2.55E-04
35	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	2.94E-04
36	GO:0004047: aminomethyltransferase activity	5.64E-04
37	GO:0033201: alpha-1,4-glucan synthase activity	5.64E-04
38	GO:0008479: queuine tRNA-ribosyltransferase activity	5.64E-04
39	GO:0003844: 1,4-alpha-glucan branching enzyme activity	5.64E-04
40	GO:0019156: isoamylase activity	5.64E-04
41	GO:0000234: phosphoethanolamine N-methyltransferase activity	5.64E-04
42	GO:0008883: glutamyl-tRNA reductase activity	5.64E-04
43	GO:0042389: omega-3 fatty acid desaturase activity	5.64E-04
44	GO:0010297: heteropolysaccharide binding	5.64E-04
45	GO:0009977: proton motive force dependent protein transmembrane transporter activity	5.64E-04
46	GO:0043169: cation binding	9.15E-04
47	GO:0004373: glycogen (starch) synthase activity	9.15E-04
48	GO:0016992: lipoate synthase activity	9.15E-04
49	GO:0004751: ribose-5-phosphate isomerase activity	9.15E-04
50	GO:0005528: FK506 binding	1.14E-03
51	GO:0004185: serine-type carboxypeptidase activity	1.20E-03
52	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	1.31E-03
53	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	1.31E-03
54	GO:0004351: glutamate decarboxylase activity	1.31E-03
55	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	1.31E-03
56	GO:0016491: oxidoreductase activity	1.73E-03
57	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.75E-03
58	GO:0008453: alanine-glyoxylate transaminase activity	1.75E-03
59	GO:0043495: protein anchor	1.75E-03
60	GO:0008891: glycolate oxidase activity	1.75E-03
61	GO:0047134: protein-disulfide reductase activity	1.92E-03
62	GO:0003959: NADPH dehydrogenase activity	2.23E-03
63	GO:0050662: coenzyme binding	2.40E-03
64	GO:0004791: thioredoxin-disulfide reductase activity	2.40E-03
65	GO:0004332: fructose-bisphosphate aldolase activity	2.75E-03
66	GO:0004130: cytochrome-c peroxidase activity	2.75E-03
67	GO:0004556: alpha-amylase activity	2.75E-03
68	GO:0042578: phosphoric ester hydrolase activity	2.75E-03
69	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.13E-03
70	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	3.30E-03
71	GO:0004849: uridine kinase activity	3.30E-03
72	GO:0019899: enzyme binding	3.89E-03
73	GO:0004033: aldo-keto reductase (NADP) activity	4.52E-03
74	GO:0008135: translation factor activity, RNA binding	5.18E-03
75	GO:0009055: electron carrier activity	5.53E-03
76	GO:0004222: metalloendopeptidase activity	5.71E-03
77	GO:0071949: FAD binding	5.86E-03
78	GO:0003746: translation elongation factor activity	6.56E-03
79	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	6.58E-03
80	GO:0008047: enzyme activator activity	7.33E-03
81	GO:0030234: enzyme regulator activity	7.33E-03
82	GO:0043621: protein self-association	9.16E-03
83	GO:0004565: beta-galactosidase activity	9.75E-03
84	GO:0004089: carbonate dehydratase activity	9.75E-03
85	GO:0031072: heat shock protein binding	9.75E-03
86	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	9.89E-03
87	GO:0004857: enzyme inhibitor activity	1.34E-02
88	GO:0051536: iron-sulfur cluster binding	1.34E-02
89	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.40E-02
90	GO:0016787: hydrolase activity	1.44E-02
91	GO:0015035: protein disulfide oxidoreductase activity	1.68E-02
92	GO:0022891: substrate-specific transmembrane transporter activity	1.74E-02
93	GO:0003727: single-stranded RNA binding	1.85E-02
94	GO:0003729: mRNA binding	2.13E-02
95	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	2.18E-02
96	GO:0005355: glucose transmembrane transporter activity	2.29E-02
97	GO:0010181: FMN binding	2.29E-02
98	GO:0048038: quinone binding	2.53E-02
99	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.53E-02
100	GO:0005515: protein binding	2.75E-02
101	GO:0008483: transaminase activity	3.03E-02
102	GO:0016887: ATPase activity	3.56E-02
103	GO:0042802: identical protein binding	3.59E-02
104	GO:0004721: phosphoprotein phosphatase activity	3.70E-02
105	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.70E-02
106	GO:0003824: catalytic activity	3.87E-02
107	GO:0008168: methyltransferase activity	4.20E-02
108	GO:0004601: peroxidase activity	4.36E-02
109	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.41E-02