Gene: AT1G54350
Gene description
TAIR ID: AT1G54350
Short description: ABC transporter family protein
Pathogen responsiveness: -0.76
General responsiveness: 0.87
GO biological process
transmembrane transport
GO cellular component
plasma membrane, chloroplast, integral component of membrane
GO molecular function
ATPase activity, coupled to transmembrane movement of substances, ATP binding
Protein domain
| Pfam | PF06472, ABC transporter transmembrane region 2 |
| Pfam | PF00005, ABC transporter |
| SMART | SM00382, AAA |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Transcriptional regulation
No regulation information
Protein-protein interaction network
The number of partners (degree) is: 15 (Top20%)
click to view PPI networkCoexpression network
Differentially expressed condition 
7 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -1.70 | 4.23E-03 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -1.99 | 5.84E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -1.62 | 1.23E-11 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -1.78 | 3.70E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -2.15 | 1.82E-13 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -1.64 | 8.23E-12 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | -1.64 | 6.08E-03 |
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