Gene: AT1G52880
     


Gene description


TAIR ID: AT1G52880

Short description: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Pathogen responsiveness: -1.67

General responsiveness: -0.24

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


integument development, multicellular organism development, regulation of embryonic development, regulation of transcription, DNA-templated, transcription, seed morphogenesis


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF02365, No apical meristem (NAM) protein

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G24050, AT4G34680, AT2G45050, AT3G60530, AT5G61850, AT1G76890

Target:
AT1G44075, AT1G53320, AT1G47495, AT2G14190, AT2G45150, AT3G43290, AT3G02710, AT2G11440, AT5G24140, AT3G04900, AT3G46500, AT1G12211, AT5G05780, AT5G61850, AT5G60320, AT5G43105, AT4G37870, AT1G09630, AT3G02700, AT1G38630, AT5G32518, AT1G66570, AT3G61410, AT2G07703, AT5G18540, AT5G39970, AT5G30870, AT5G41650, AT5G65760, AT5G43270, AT1G66090, AT2G07676, AT4G18255, AT3G02780, AT2G13240, AT4G24974, AT1G11980, AT4G15258, AT5G19340, AT1G19150, AT1G13870, AT4G06547, AT3G24230, AT2G41360, AT1G01320, AT2G23400, AT5G37460, AT1G09640, AT5G57670, AT3G46384, AT3G17660, AT1G14610, AT3G47000, AT2G30984, AT4G35783, AT2G36255, AT4G29860, AT3G42270, AT3G42260, AT5G49740, AT3G43005, AT5G45590, AT1G77746, AT2G02500, AT5G58700, AT4G07893, AT3G09595, AT3G27870, AT5G17262, AT2G19390, AT4G28360, AT3G31475, AT2G18560, AT2G38700, AT5G49746, AT1G15890, AT1G42560, AT2G31625, AT5G58450, AT2G06770, AT5G43610, AT1G64490, AT4G20770, AT3G10040, AT2G38800, AT5G62740, AT4G06536, AT5G65630, AT3G59290, AT5G49743, AT5G30648, AT5G17260, AT3G43280, AT1G79975, AT3G07450, AT2G27680, AT1G18290, AT2G33560, AT3G13130, AT2G39960, AT4G00460, AT2G38460, AT4G18970, AT5G14100, AT2G07791, AT3G31904, AT5G44286, AT3G27740, AT3G17090, AT1G79330, AT3G05110, AT4G03460, AT3G04903, AT1G18120, AT3G58590, AT2G11235, AT2G14245, AT3G54240, AT1G38710, AT1G08630, AT3G42993, AT2G26510, AT5G44283, AT4G02810, AT4G26225, AT5G34841, AT3G46480, AT5G20730

Protein-protein interaction network


The number of partners (degree) is: 12 (Top20%)

click to view PPI network

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, Flg22 2 h-1.955.41E-06
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-1.979.39E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.545.02E-05






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