gene detail

Gene description

TAIR ID: AT3G27740

Short description: carbamoyl phosphate synthetase A

Pathogen responsiveness: -2.65

General responsiveness: -2.94

Orthologous

Rice:

OS02G0708100

Maize:

GRMZM2G147450

Wheat: No orthologous gene

GO biological process

urea cycle, arginine biosynthetic process, 'de novo' UMP biosynthetic process, glutamine metabolic process, 'de novo' pyrimidine nucleobase biosynthetic process, cellular response to phosphate starvation

GO cellular component

chloroplast stroma, chloroplast

GO molecular function

ATP binding, carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity

Protein domain

Pfam	PF00117, Glutamine amidotransferase class-I
Pfam	PF00988, Carbamoyl-phosphate synthase small chain, CPSase domain
SMART	SM01097, CPSase_sm_chain

Metabolic pathway

PWY0-162: superpathway of pyrimidine ribonucleotides de novo biosynthesis
ARGSYN-PWY: arginine biosynthesis I
CITRULBIO-PWY: citrulline biosynthesis
PWY-5004: superpathway of citrulline metabolism
PWY-7211: superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis
PWY-4984: urea cycle
GLUTAMINDEG-PWY: glutamine degradation I
ARGSYNBSUB-PWY: arginine biosynthesis II (acetyl cycle)
PWY-5686: UMP biosynthesis
PWY-7060: ornithine-citrulline shuttle

KEGG pathway

PATH:ath00240: Pyrimidine metabolism
PATH:ath00250: Alanine, aspartate and glutamate metabolism

Transcriptional regulation

Regulator:
AT4G36990, AT1G52880

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.50	4.85E-08