Gene: AT5G43270
     


Gene description


TAIR ID: AT5G43270

Short description: squamosa promoter binding protein-like 2

Pathogen responsiveness: -0.42

General responsiveness: -0.26

Orthologous


Rice:

OS02G0139400  

Maize: No orthologous gene
Wheat:

TA.3711.1.S1_AT  


GO biological process


transcription, DNA-templated, protein ubiquitination, regulation of timing of transition from vegetative to reproductive phase, regulation of transcription, organelle organization, anther development


GO cellular component


integral component of membrane, nucleus


GO molecular function


ubiquitin-protein transferase activity, transcription factor activity, sequence-specific DNA binding, metal ion binding, ligase activity


Protein domain


PfamPF03110, SBP domain

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT2G02820, AT1G24260, AT4G36990, AT1G14350, AT1G52880, AT4G31800

Target:
AT2G34710, AT4G13260, AT5G25620

Protein-protein interaction network


No Interactor


Differentially expressed condition


9 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.705.36E-07
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.561.83E-04
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.591.11E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.577.69E-12
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h-2.044.13E-04
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.381.06E-05
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.131.14E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.452.98E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.751.03E-03






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