Gene: AT1G20010
     

Gene description


TAIR ID: AT1G20010

Short description: tubulin beta-5 chain

Pathogen responsiveness: 1.36

General responsiveness: 0.14

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


microtubule-based process


GO cellular component


microtubule, vacuolar membrane, chloroplast, plasma membrane, cytoplasm, chloroplast stroma, membrane, cell wall


GO molecular function


GTPase activity, protein binding, GTP binding


Protein domain


PfamPF03953, Tubulin C-terminal domain
PfamPF00091, Tubulin/FtsZ family, GTPase domain
SMARTSM00865, Tubulin_C
SMARTSM00864, Tubulin

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G14230, AT1G24260, AT5G61850, AT2G43010, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 7

click to view PPI network

Differentially expressed condition


49 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-1.848.03E-06
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h-1.863.07E-07
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d-1.524.70E-06
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h-1.815.64E-07
GSE17464Laer, controlLaer, Flg22 2 h-2.417.50E-05
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d2.056.45E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.751.08E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.992.22E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.955.42E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.953.75E-11
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.682.62E-07
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.682.99E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.741.23E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.941.95E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.247.85E-13
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.451.66E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-4.097.50E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.753.48E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.703.66E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-4.001.12E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.901.27E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-4.313.61E-14
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.611.71E-07
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.471.44E-10
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-3.744.53E-06
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-3.582.14E-03
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.743.51E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.112.59E-02
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-3.101.48E-10
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-2.931.44E-08
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.798.33E-09
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-2.421.21E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-3.151.63E-10
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h-2.039.94E-05
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.951.03E-09
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-2.328.61E-06
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h-1.961.40E-04
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h-1.778.84E-04
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h-1.602.63E-03
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.881.87E-04
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-2.028.23E-05
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.861.09E-04
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-2.891.98E-08
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.483.39E-07
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-2.843.98E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.821.04E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h-1.751.20E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.823.03E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min-2.281.02E-02






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